Salmo trutta (river trout): 115198262
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Entry
115198262 CDS
T08542
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04517
IgSF CAM signaling
stru04519
Cadherin signaling
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115198262
04519 Cadherin signaling
115198262
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115198262
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Ortholog
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
PDZ_4
T15H9-4_C
MPDZ_u10
L27_1
Motif
Other DBs
NCBI-GeneID:
115198262
NCBI-ProteinID:
XP_029615962
LinkDB
All DBs
Position
8:complement(15358603..15424980)
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AA seq
2107 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQLLKD
QGGVTTFGGDLSECYTTAHANGSHLAYPESSTDTQINGKPSPEEFEQIIRSMAQGRYVTH
MELVKPLSGGLGFSVVGLRSENRGELGIFVQEIQPGSVAHCDGNLKETDQILAINGQPLD
QTVTHQQAIGILQRASEHVQLTVARGPIPQLASPVVSRTPSAASTMSAHSSAAHWNHVET
MELVNDGTGLGFGIVGGKNTGVIVKTILPGGIADQDGRLHSGDHILTIGDTDLYGMGSEQ
VAQVLRQCGNRVKLVITRGPPEETSTVPMVLPTVTEQQGYEEEEAESFDVGLTKNAQGLG
ITIAGYVGDKNSEPSGIFVKSITKDSAVEQDGRIHVGDQIIAVDGMNIQGYTNQQAVEVL
RHTGQTVHLKLVRSGFRPEDIPPAVVPSVIVLPPTPGGQDPTLERTDVVDTTAQGEKQYQ
ALSGESDVSTVKDQLTKNTRDEAKLTEDEELELMKKWQETLGPSNKVVIAQVEKFSESSG
LGISLEANNGHHYIRSVLPEGPVGRCGKLISGDELLEVNGISLIGETHKEVVRILKELPV
CVYMACSRPAPLLQSDRDSGQTGLDEFSTEPKIKIQGDLSSFLVPGGSEGAATRENVTEE
SLGAPLAMWETEIQDIELEKGESGLGFSILDYQDPMDPAKTVIVIRSLVPEGVAERDGRL
LPGDRLMFVNSTNLDNASLEEAVQALKGANIGMVHIGVAKPLPPYNEEDSPSSSSGISFF
LSSTLLVKESDEEEPAEDHLFRAEPALIDSNEGDLTDERALDHRFSGDEDDTLQASMIAL
HGSTCSADMDYQTTLQSSTPKRSAHLDLLTEHPLVTLFGLADDTEPFSPEEKPIVFPLPR
SIGGHALTIDDNALTSSDQYLAHHLTQMEPSDLSNLYSPYTDPEPGLNDLGEPVQSLHFQ
VESTMAVEDIGEMEGLMKGDEPSVKQSKEEGDEVITTGSHFERTITVVKGNSSLGMTVSS
IKDGLGMYIRSIIHGGSISRDGRLGVGDLILVINGESMANLTNTQARAMLRRHSLIGPDL
GSACAPEDDLCPFYVITYVPVEYLEEYRTSLEQPKYDVCSDAPPAPKRGIPELPEREDGE
GEESELQTATFSNWNQPMKVELKREAGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHIME
DSPAGRNGTLKTGDRIVEVDGVDLSDASHEQAVEAIRRAGNPVVFLVQSIVHRPRPKSRY
SPTSSPVIEYSTALKRLPHHMCQSSTTDTNEERVARRNSDKEVECHSRLFLRLSPTNPFT
PTPFKPPKREAGKTSSTTPHLSLPVVPHVGETDTDTLTEIPDRPSQTEEEDTFDYRWKNI
SQRYGSLPGLLHVIELEKGKTGLGLSLAGNRDRSRMSVFVVGIDPSGAAGKDGRVVVGDE
LLEINGQILYGRSHQNASSIIKSAPSKVKIIFIRNTDALNQMAVGPVREHGDTLEPQTEL
ETCSSIAPSAIDVDMVKYVQHVILLKEEGGFGITFSEDTKDGVVIQSITEKGPAGKDGSI
KSGDKLLAVEDKPVMGYTVDRVHSLLKKAKSSVKLTICTDKSSPLLPHCTGQATSLPSIP
RISMATLGQSESEPIRSSSRSSTPGTLASSDPVTCPIIPGCETTIDISKGRTGLGLSIVG
GCDTLLGTIIIHEVYEDGAASKDGRLWAGDQILEVNGIDLRIATHDEAINVLRQTPQRVR
LSVYRDEAQYKEEDLWDAFTVELNKKPGQGLGLSIVGRRNDTGVFVSDIVKGGVVESDGR
LMQGDQILSVNKEDVRNATQELVAELLKCGVGPIVMEVGRFKAGPFHSERRFSQSSQMSE
TGSCKVTPHSLSASSGSLQVDCDSLQHANQESLDHQEIRSVEFTKGPTDSLGISIAGGVG
SPLGDVPIFIAMMNPTSLVVQTHKLKIGDIIVSICGTATEGMSHSQAVTLLKNATGTVGL
QVVAGSDTTVTGHFHEQTATGLSVSGLTATSIFHDDLGPPQYKTITLDRGPDGLGFSIVG
GFGSPHGDLPIYVKTVFGKGAASEDGHLKRGDQIMAVNEQSLEGVTHEDAVGILKRTKGT
ITLTVLS
NT seq
6324 nt
NT seq
+upstream
nt +downstream
nt
atgattgagacaatggatacccagcgtgccttgcaggcagtggagcgtctccaggccaag
ctgaaggagcggggggaggtccctaccgaggagaagctaagccttctcaagtcggtgctc
cagagccccctgttccaccagattctggccctgcaaaagtctgtccagctcctcaaagac
cagggtggtgtcacaacatttggtggtgacctgagtgaatgctacacaacagcccatgcc
aatggcagccatcttgcctacccagaatcctccactgatacacagatcaatgggaagccg
tctcctgaggagtttgagcagatcattcgctccatggctcaggggcgctacgtgacacac
atggagctggtgaagccgctgtctgggggcctaggcttcagcgtggttggtctgaggagt
gagaaccgcggggagctgggcatcttcgtccaggagatccagcccgggagcgtggcccac
tgcgatgggaatctgaaggagacagaccagatcttggccataaacggtcagcccctggac
cagaccgtgacccaccagcaggccataggcatcctgcagagagcctctgagcatgtgcag
cttaccgtggccagaggacccatccctcagctggccagccccgtggtgtctcgcacaccc
tccgctgccagcaccatgtctgcccactccagcgcggcccactggaatcatgtggagacc
atggagctggtcaacgacgggacaggcctgggctttggcattgtgggaggaaagaacacc
ggtgtcattgtcaaaaccatcctgcctggaggcattgctgatcaggatgggcgtctgcac
agtggggaccacatcctcacgattggggacactgacctttatggcatgggcagtgagcag
gtggctcaggtcctgaggcagtgtggtaacagagtgaagctggtcatcaccagaggccct
ccagaggagacctccaccgtcccaatggtgttgcccactgtcacagagcaacagggctat
gaggaagaggaggctgaatcgttcgacgtcgggcttaccaagaacgcccagggtctggga
atcactatcgccggctatgtgggagacaaaaattccgagccctctggtatttttgtgaaa
agtataactaaagacagtgcagtagagcaagatggccgcatccatgttggggaccagatc
atagcagtggacgggatgaatatccagggctacaccaaccagcaggccgtggaggtgctg
agacacacgggccagacggttcacctgaagctggtcagaagtggcttccgtccagaggac
atcccacccgctgtggtgcccagtgtgatcgtacttccaccaaccccagggggccaagac
cccacactggagagaacagatgttgtggacaccaccgctcaaggtgagaaacagtaccag
gcattgagtggggaatcggatgtctccactgtgaaggatcagttaactaagaacaccaga
gacgaagcaaagctaacagaggatgaagagttggagctgatgaagaagtggcaggagacg
ctcggccccagcaacaaagtagtgattgcccaggtggagaagttcagtgagagcagtggt
ctgggcatcagtctggaggccaacaacgggcaccactacatccgctctgtcctgcccgag
gggccagtgggccgctgtgggaaactcatcagtggggatgaactgctcgaggtcaatgga
atatccctgattggtgagacccacaaggaagtggtgaggattctgaaggagcttcctgtc
tgtgtctacatggcctgctctaggcccgcccctctccttcagagtgacagggattctggc
caaacagggttggatgaattttccaccgaacctaaaattaagatacagggagacctcagc
agtttcctggtacccggaggttccgagggggcggcaacaagggaaaatgtgacggaggag
agtctgggagctcctttggccatgtgggagacggaaatacaggacatcgagctggagaag
ggagagagtggactgggattcagcatcttggactaccaggacccaatggatccggcaaag
acggtgatcgtgattcgctctctggtgccagaaggagtggccgaacgggatggcaggctt
ttgccaggcgaccggctcatgttcgtcaatagcaccaatctggacaacgccagtctggag
gaagccgtccaggcactgaagggggccaacatcggcatggttcacattggggtggccaag
ccactgcctccatacaatgaagaggacagtccgtcgtcatcctctggaatcagttttttt
ttatcttcaacactgctggttaaagaaagcgatgaggaggagccagcggaggaccacctt
ttccgggcagagcctgcattgattgactccaatgagggagacctgaccgatgagagggca
ttggatcatcgcttctctggcgatgaggatgacactttacaggcttccatgatcgccctc
cacggcagcacctgcagcgccgatatggactaccagaccaccttgcagtcctccacaccc
aaacggagtgctcacctggacttgttgactgagcatcccttggtgacgttgttcggcctc
gcggacgacactgaacccttctccccggaggagaagcccatcgttttccccctgcccagg
agtattggaggtcacgccctaacgattgacgacaacgcactaactagctctgatcagtac
ctggcgcatcacttaacccaaatggagccgtcggatctgtcaaacttgtacagtccgtac
actgaccctgagcccggtttgaatgatttgggggaaccggtgcagtctctccattttcag
gtggagtccaccatggccgttgaggacataggggagatggaaggcttaatgaagggggat
gagccatctgtaaagcagtccaaagaggaaggggatgaggttataaccactgggagccat
tttgaaaggacaatcactgttgtcaagggcaactccagtctcgggatgacagtgagctcc
atcaaggatggcttggggatgtacatccgcagcatcatccacgggggttccatcagccga
gacggccgtctgggagtgggggacctaatcctagtcatcaacggcgagtccatggccaac
ctgactaacacccaggcccgcgccatgctccggagacactctctcatcgggccagacttg
ggatctgcttgtgccccagaggatgatctgtgccccttttatgtcattacctatgtccct
gtggagtatctggaggagtacaggactagcctggagcagcctaaatatgacgtctgctct
gatgcacctccggcaccaaagagaggaatcccagaacttcctgagcgggaggatggagag
ggagaggagagcgagctacagaccgccaccttcagtaactggaaccagcctatgaaggtg
gagctcaaaagagaagcgggcaagtcccttggcatcagcattgtagggggcagagggatg
ggcagtcgccttagcaacggcgaggtgatgcggggcatcttcatcaaacatatcatggag
gacagccccgccggccgcaatggaaccctgaagactggagataggattgttgaggtggac
ggtgtggacctgagtgatgccagtcacgagcaggctgtggaggccatccgcagggcagga
aaccctgtggtgttcctggtccagagtatcgtccacaggcccaggcccaagtcccgctat
agccccacttcatcaccagtcatagagtacagcaccgctttaaaacgcttgcctcatcac
atgtgccagtcctcaaccacggacaccaacgaggagagagtggcgcggcgcaatagtgat
aaggaggttgagtgtcacagtagactattcctacgcctctccccaactaacccttttact
cctactccgtttaagccgccaaagcgggaagcgggaaagacatcgtccaccacccctcac
ctctctcttcctgtggttccccacgttggagagacagacacggatactctgacagagatt
cccgacagaccgtcccagacggaagaggaggatacgtttgactacagatggaagaacatc
agtcagaggtacggcagcctcccagggcttctgcacgtgattgagctggagaaggggaag
accggcctgggccttagcctggctggcaaccgtgaccgctcccgcatgagcgtgtttgtg
gtcgggatcgaccccagtggagccgccggcaaagatggtcgcgttgtggtcggggatgaa
ctgttggagatcaacgggcagattctgtatgggcggagtcaccagaatgcctcctccatc
attaaaagcgccccatcgaaggtcaagatcattttcatcaggaacacagatgctctcaac
cagatggctgtgggaccagtgagggagcatggagacacactggagccccagacagagctg
gaaacatgttcttccattgcaccctcggcgatcgatgtcgacatggtcaaatatgtgcag
catgtcattctgctgaaggaggagggtggattcggcatcactttcagtgaggacaccaag
gatggggttgtgattcagagtataactgaaaaaggaccagcaggaaaggacggcagcatc
aaatctggagataaactcctagctgtggaggataagccagtgatgggctacactgtggac
agggtccactctttactgaagaaggccaaaagctcagtgaaattgactatctgcacagac
aagtcatcgccccttctcccccactgtactggtcaggcaaccagcctacccagcatccct
agaatctccatggctaccctgggccagtctgagtcagagccaatcaggagctctagtcgc
tcgtccacccctggcactctggcttcctctgaccctgtgacctgtcccatcatccccggc
tgtgagaccaccatagacatctccaagggccgcacaggcctgggcctcagcatcgtgggg
ggctgtgacactcttctggggaccatcatcattcacgaggtctatgaggacggcgctgcc
tccaaggatgggagactttgggctggggaccagatcctggaggtgaatggcattgacctg
cgcatcgccactcatgacgaagctatcaacgtgctgcgccagactcctcagcgggtgcgt
ctcagcgtttacagggacgaggctcagtacaaggaggaggacctgtgggatgccttcacc
gtggagctgaacaagaagcccggccagggcctgggcctcagcatcgtggggagaaggaat
gacacaggggtgtttgtgtcagacatagtgaaagggggtgtggtggagagtgacgggagg
ctgatgcagggagaccagattctgtccgtcaacaaggaggacgtcagaaatgccacccag
gagttagtggccgagctgctgaagtgtggtgtgggacccatagtgatggaggtgggcaga
tttaaagccgggcccttccactctgagaggaggttctcacagagcagtcagatgagtgaa
acaggcagctgcaaggtgacccctcactctctgtcagcctcctctggaagcctccaagtg
gactgtgacagcttacaacacgcaaatcaggagtcactggaccaccaggagatcagaagt
gttgaattcacaaagggtcccactgattccttgggcatcagtattgcgggtggagtgggc
agtcccctgggtgatgtgcccatcttcatcgccatgatgaaccctactagcctcgttgtc
cagacacacaaactcaagatcggtgacattatcgtcagtatctgtgggaccgctactgag
ggtatgagccacagccaggccgtcaccctgctgaagaacgccaccggcaccgtcgggctt
caggtggtagcaggaagtgataccacagtgaccggccactttcatgagcagacagctacc
ggactctcagtctcaggtcttactgctactagcatcttccacgacgacctgggacctcct
caatataagaccatcacactggacagaggcccagacggactgggcttcagcattgttggt
ggcttcggaagcccacatggagacctgcccatttatgtgaaaaccgtgttcggaaagggg
gcggcgtcagaggacgggcatctgaagcggggggatcagattatggctgttaacgaacag
agtctggagggggtcacccacgaggatgccgtgggcatcctgaagaggaccaaaggaaca
atcaccctgactgtactttcctag
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