Salmo trutta (river trout): 115198266
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Entry
115198266 CDS
T08542
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru02010
ABC transporters
stru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115198266
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115198266
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115198266
Transporters [BR:
stru02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115198266
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
115198266
NCBI-ProteinID:
XP_029615979
Ensembl:
ENSSTUG00000051008
LinkDB
All DBs
Position
8:15841605..16132903
Genome browser
AA seq
2260 aa
AA seq
DB search
MGLLTQLGLLLWKNFTLRKRQKVRLVVELLWPLFLFLILVRVRSTNQPIYQGGCHYPNKA
MPSSGVLPWLQGMMCNIGNPCVNHPTPGEAPGQVNNFNNSIIAGMLIELQSLLANRSILT
KFQRLSEDVDHWALIIQTSNPANGQPIPLRSILNDNEMFTAYLKKNLSMPLTVVNSLMNS
NIHRNEMMGISRQDDLRTTLCNGTTLDRYVEFTSVSDKEAFQNVSCSLPAQQMRRAKEVF
LQNLDTRKILTNLPLDVNPAETFGLVGKTTEDALHVIDEMNKLQNSMLFKSANTLDFRAD
AFGSLNMLLCGKAPDSNSTNTTMNFSASGLTRNDTENSELLDARNRSSSAFCKILIDNLE
GTPGLRVVWSTFRPLIQGKVLYTPDTPATRLMVKEANSTFNALAMIKELAQAWEDFGQLV
WDYFQNGRQVNALRALLDNPVFVALLNQRLKGTRWTAELLANFLYNGPPEGRPTGMPPND
WRNAFNTTSQILDLLKKFIGCLNLDKFEAADSERHLMTRALELLESNKYWAGIVFEDLNP
TASHPPPYVKYKIRMDIDKGERTNKIKERGWSPGARGNSFNDLRYIWGGFAYLQDMMDHG
IIRAHTNKSQPLGVFAQQMPYPCYVDDVFLRSLARSLPLYMTLAWIYSVAMIVKGIVMEK
EARLKETVRMMGLRSSTYWLSWAVSSMLPLAVSALLLTLILKYGKVLQYSDPSVIFVFML
VFCMATIMECFFISVFFSKANLAAACGGLIYFVLYLPHLLCYAWRDVLGFQVKISVSLLS
CVAFGYGCENFAKYEEQGIGIQWSNIAQNPEGDRYSFIVSIIMMLIDALIYWLLTWYIEN
VFPGQYGIAKPWSFPFTASYWCGTSAVPNADPSQFKDPMEYNDYLEKPPPNMKAGVSIRN
LVKIYKTGKKLAVDGLSVDFYENHITSFLGHNGAGKTTTMSILTGLFAPTSGTALINGYD
IRTDMDTIRKHLGMCPQHNVLFNDLTVEEHIYFYARLKGRSRDEVKTEMDQMIKDVGLPH
KRKELAKNLSGGMQRKLSVAIAFVGGSNIVILDEPTAGVDPYARRGIWELLLKYKKGRTI
ILSTHHMDEADILGDRIAIISHGKMCCYGSSLFLKKYFGSGYYLTLVKAGNEQITNERSG
VKQGQGKHQETSPRTKETDETLRRTSLDEGIASQNWSNSDPTELTAVSKLVRRHVPEAVF
LESIGQEITYILPYSGAKDGTFALLFKELDLEMADIGFTNYGISDTTLEEIFLKVAEDTG
VDVEITDNKAPLVRDKTRSSRESKRQRQSLTNVGNTSDKVTGKSAEVKAKFTSRVEDVER
VANVNGKGSSVIMGWELIRRQFLALFIKRFHHARRSRKGIIAQVILPAVFVCLSLIFSVI
IPPFAEYPNLELQPWMYGLPQTTFYSNDGPPDNTEVAQVVDSLVNNPGFGTRCMANNPIP
NLPCVPIDSKWITPSVEPSINNILINGTWSMANPSPNCQCSTPQKTIMLPDCPPGAGGLP
PPQRTQNTTDTLQDLTGRNMTDFLLKTYEKAGRKRYGGISVGGVNSQVRMTEPEIEAVIR
DLKSLFNSPQDNTTEQILLNTKTLLKELGTRDNVKVWFYNQAWHGIVSFLNVANNAILRG
NLPTGRDPREYGISSSSHPLNLTKAQLSYQALAATSTDVVVSICVIFAMSFIPASFVLFL
IQERVNRAKHLQFVSGVNPAVYWVANFAWDICNYIVPCLIVIVIFLCFQQKAYVSPPNLP
ALIWLLVMYGWSITPMMYPASFIFSVPSTAYVVLTCINLFIGINGSLATFVMELFDDDKI
SHINDIVKQVLLIFPHFCLGRGLIDMGKNQAMATLFERFGEDRFQDPLSWDMVGKNLCAM
AIQGAVMFTITLLIQYKFCCKPRLISGKTFSKEDEDVDVAQERARVHKGGAEKDLLRICD
LSKVYSGKNVPAVDRVCLGVPAAECFGLLGINGAGKTTTFKMLTGDIAVSGGEAFLNGYS
IRTEMRDVHQNMGYCPQFDALNDLLTGREHLEFYARLRGVPEKEVTMVAEWGIQKLGLVK
YSNKSAGTYSGGNKRKLSTAIALIGCPPVVFLDEPTTGMDPKARRFLWDCILSIIKEERS
VILTSHSMEECEALCTRMAIMVNGQFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALALVE
EFVHETFPGSVLKEKHHNTLQYQLPLSKGTLVSIFSQFTTHQQRLGVEDYSVSQTTLDQV
FVNFARYQHEEDNHATYDNKVDVSDEMPMKTQNPPVPESA
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacacaacttggtctgctcctgtggaagaacttcactcttcggaagaga
caaaaggtgcgtctggtggtggagttgttgtggcctctcttcctgttcttaatcctcgtc
agggtgagatcaaccaatcaacccatttatcagggcggatgtcattatccaaataaagcc
atgccgtcctccggggtgctgccttggcttcaaggcatgatgtgtaacataggcaacccc
tgtgtaaaccatcccacaccaggagaagcaccaggacaagtcaacaacttcaacaattcc
ataattgctgggatgttgatcgagctgcagtcacttctggcaaacagatccatcctaacc
aaattccagaggctttcagaggatgtggaccattgggctttgattatacagacatctaac
cctgcaaacggtcagcccattcctctgagaagtatcctaaatgacaatgaaatgttcacc
gcatatctgaagaagaacttgtccatgccattgacagtagtcaacagtctgatgaactca
aatattcatcggaatgagatgatgggcatttcaaggcaagacgacctgagaactaccctc
tgcaatggaacaactcttgatagatatgtggaattcaccagcgtgtctgacaaggaggcc
tttcagaatgtcagctgctccctcccagcacaacagatgagacgagccaaggaagttttc
ctacaaaacctggatacaaggaagatactcaccaacctacctttggatgtgaatccggca
gagacatttggattagtggggaaaactacagaagatgcattacatgtgattgatgagatg
aacaagttgcagaactcaatgttgttcaagtccgctaacacgctggatttcagagcggat
gcgtttggtagtctgaacatgctactatgtggcaaagctccagactccaactccacaaat
accaccatgaatttctctgcttctggactgacgaggaatgacacagaaaacagtgaatta
ctggatgccaggaaccgcagttccagtgccttctgcaaaatattgattgataatcttgag
ggaactcctggcctacgtgttgtctggagtacgtttcggcccctaatccaagggaaggtc
ctctacacccctgacacacctgccactcgactaatggtgaaagaggcaaatagcacattc
aatgcgttggccatgataaaagagctggcgcaagcttgggaggatttcggacaacttgtt
tgggactactttcaaaatggccgccaagtcaatgccctgcgggccctgctggataaccct
gtgtttgtagccttgctcaaccaacggctcaaaggcacaagatggacggcagaactgctc
gccaacttcctgtacaatgggccccccgagggtcgccccacgggcatgccgccaaatgac
tggcgcaacgcgttcaacaccacaagccaaatcctggacctcctgaagaagttcattggg
tgcttgaacctggataagtttgaggctgccgacagtgagagacatctcatgactagagcc
ttggagcttttagagagcaataagtactgggctggtatcgttttcgaagacctcaaccct
accgccagccacccccctccttacgtcaagtacaagatccgcatggacattgataagggg
gagcgtacgaataagatcaaagaaaggggatggtctcctggggcccgtggcaactccttt
aatgacctgcgttatatatggggaggcttcgcctatctgcaggacatgatggaccatggc
ataatacgggcgcacacaaacaaatcccagccgctcggcgtgtttgcccagcaaatgcca
tatccctgctacgtggacgatgtgttcctccgctcgctggcacgctctctgcccctatac
atgaccctggcctggatctactcggtggcaatgatcgtgaagggcattgttatggagaag
gaggcacgtctgaaagagacagtgaggatgatggggctgaggagctccacctactggctg
agctgggccgtgtccagcatgctgccgctggctgtcagtgcgcttctcctcaccctcatc
ctaaagtatgggaaggtgctgcagtacagcgacccctctgtgatcttcgttttcatgctg
gtcttctgcatggccaccatcatggagtgtttcttcatcagcgtcttcttctcaaaggcc
aacctggcggcggcgtgcggtggtctcatctacttcgtactctaccttccgcacctcctc
tgctatgcctggagggacgtcttggggttccaggtcaaaatctctgtgagtttgctgtcg
tgtgtggccttcgggtatggctgtgagaactttgccaagtacgaggagcagggcatcggt
atccagtggagtaacattgcccaaaatcctgagggagatcggtacagtttcatcgtgtcc
atcatcatgatgctcatcgacgccctcatctactggctgctcacgtggtacatcgagaac
gtcttcccaggccaatatggaatagccaagccgtggtccttccctttcacggcctcctat
tggtgtgggacgtctgcggtgcccaacgctgaccctagtcagttcaaggatcccatggaa
tataatgattatttggaaaagccaccacccaatatgaaggcaggggtctcaatcaggaac
cttgtaaagatctacaaaacggggaaaaagcttgctgtggatggacttagtgtggacttc
tacgagaatcacatcacctctttccttggtcacaatggcgcaggaaaaacaaccactatg
tcgatcttgacgggactcttcgctccaacatcggggaccgctctcataaatggctacgat
atccgcacggacatggacaccattaggaagcatctgggaatgtgccctcagcacaacgtc
ttgttcaatgaccttacagtagaggagcacatctacttctacgccagattaaagggtcga
agccgtgatgaagtgaaaacggagatggaccaaatgatcaaggatgtagggctgccgcac
aaacgcaaggaacttgccaagaacctgtcagggggaatgcaaaggaaactgtcggtggcc
atcgcattcgtgggaggatccaacatcgtcatcctggatgaacccacagcaggggtggac
ccgtacgcccggagagggatatgggaacttctgttgaagtacaaaaaaggtcgcacaatc
atcctctccactcatcacatggatgaggcggacatcttgggagaccgcattgccattatc
tctcacggcaagatgtgttgttacggctcctccctgttcctgaaaaaatactttggcagt
ggctactacctcactctggtcaaggccggaaatgagcaaattaccaacgagcgcagcgga
gtcaagcagggccaggggaaacatcaggaaacatcaccccggaccaaggagactgatgag
accttgaggagaaccagtctggatgaagggattgcgagccagaactggagcaactctgac
cccacagagcttacagctgtcagtaagctggtgcgtcggcatgttcccgaggcagtgttc
ctggagagcatcggccaggagatcacctacatcctgccctacagcggggccaaggatggc
accttcgccctccttttcaaagagctggacctggagatggccgacattggcttcaccaac
tacggcatctcagataccacactagaggagattttcctcaaagtggcggaggacacaggt
gtggatgtggaaattacagataacaaagcacctttggtaagagacaagacaagaagttca
agggaatccaagcggcaacggcaaagcctgaccaatgtcgggaacacttcagacaaagtg
actgggaaaagtgctgaagtgaaagccaagttcacaagcagagtggaggatgtggagaga
gtggccaatgtgaatgggaagggctccagtgtgataatgggatgggaactaatccggaga
caattcctggccctcttcatcaaacgtttccaccacgcacgcaggagccgcaaaggcatc
attgctcaggtgattctgccagctgtcttcgtctgcctgtctctcatcttttccgtcatc
atccccccttttgctgagtaccctaatctggagctgcagccatggatgtacgggctgccc
caaacaacattctacagcaatgatggaccgccagataatacagaggttgctcaagtggtg
gactctttggtgaataatcctgggtttgggactcgctgcatggctaacaaccctataccg
aatctcccgtgtgtccccattgattctaaatggatcactccctcagtggaaccctctatc
aacaacatcttaatcaacgggacctggagcatggccaacccttcccctaactgccagtgc
agcactcctcaaaagactatcatgctgccagattgcccacctggagccggggggctgcct
ccccctcagaggacccagaatactacggacacactgcaggacctgacagggaggaacatg
acagacttcctcttgaaaacatatgagaaagcaggcagaaaaaggtacggagggatttcc
gttggaggagttaattcccaagtcaggatgactgaaccggaaattgaagctgtaatcagg
gatttgaaaagcctattcaattccccccaggataacacgactgagcagatccttctgaac
accaagacgctcctgaaagagcttgggaccagggataacgtcaaggtgtggttctacaac
caggcgtggcacgggatcgtttcgttcctcaacgtggccaacaacgccatcctgaggggt
aacctgcctacgggccgtgaccccagggagtacggcatctcctcctccagccaccctctc
aatctcaccaaggcgcagctctcctaccaggcactggctgccacctccaccgatgtggtg
gtgtccatctgtgtcatcttcgccatgtcctttatcccagcgagcttcgtcctcttcctc
atccaggagcgagtcaacagagccaagcacttgcagtttgtcagcggcgtcaacccggcc
gtctattgggtcgccaacttcgcctgggatatatgtaactacatagtcccgtgtctaata
gtcatcgtcatcttcctgtgcttccaacaaaaagcctatgtgtctcctcctaacctacca
gctttgatttggctacttgtaatgtatgggtggtctatcacacccatgatgtacccagcc
tcgtttatcttcagtgtccccagcacggcctacgtggtgctgacctgcatcaacctcttc
atcggcatcaatggcagcttggccaccttcgtcatggagctgttcgatgatgataaaatc
tcgcacatcaatgacattgtgaagcaggtgctgctcattttcccgcacttctgtctgggt
cgagggctcatcgacatgggcaagaaccaggccatggccactttgtttgaacgctttggg
gaagaccgtttccaggatcccctcagctgggacatggtggggaagaacctgtgtgccatg
gccatccagggggcagtcatgttcaccatcactctccttatccagtataaattctgctgc
aaacccagactgatttctggaaagacattctccaaggaggacgaagatgtagacgtggct
caggaacgtgcacgcgtccataaaggcggtgcagagaaggacctgctgagaatctgcgat
ctctctaaggtgtactcagggaagaacgttcctgctgtggacagggtgtgtttgggcgtt
ccagccgcagagtgctttggactgctagggattaacggggcaggaaaaacaaccaccttc
aagatgctgactggggacatcgccgtctccggaggagaggccttcctaaatggatacagc
atacggacagagatgagggacgttcaccagaacatgggctattgcccgcagtttgacgcc
ctcaacgaccttctcaccggacgagagcatctggagttctacgccagactacgaggcgta
ccggagaaggaagtcaccatggtggcagagtggggcatccagaagcttggcctggtcaaa
tattccaacaagtcagccggtacctacagcggagggaacaaacgcaagctctccactgcc
attgctctgattggttgtcctcctgtggtcttcctggacgagccaacgacagggatggac
cccaaagccagacgcttcctgtgggactgtatcctgagtatcatcaaagaggaacgttcg
gtcatcctaacatcacacagcatggaggagtgtgaggccctgtgcacacgtatggccatc
atggtgaatggacagttcaagtgtctgggcagcatccagcatctcaagagcaggttcggg
gacggctacactgtgatcgtgagggtgggcggctcgccccccgctctggccctcgtggag
gagtttgtccacgagaccttcccgggtagcgtactgaaggagaagcaccacaacactctg
cagtaccagctccccctcagcaagggcactctggtcagcatcttcagccagttcaccact
catcagcagaggctgggcgtggaggactactctgtctcccagaccactctggatcaggtc
tttgtcaactttgccaggtaccaacatgaggaggacaaccatgccacttatgacaacaaa
gtggacgtgtccgacgaaatgccaatgaaaactcagaacccacctgtcccagagagcgcc
tga
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integrated database retrieval system
