Salmo trutta (river trout): 115198368
Help
Entry
115198368 CDS
T08542
Name
(RefSeq) GRB10-interacting GYF protein 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115198368
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115198368
Surveillance factors
Other surveillance factors
115198368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
DUF6033
Motif
Other DBs
NCBI-GeneID:
115198368
NCBI-ProteinID:
XP_029616130
Ensembl:
ENSSTUG00000047317
LinkDB
All DBs
Position
8:18596070..18631043
Genome browser
AA seq
1049 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFAAILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVMRLMGKGGGVAPAGMARGRGT
TRGGGRGRGRGEGGGFYQRSIEEGEVGFGRGAREIYRSQSWDDRGERRFEKPARAREGVR
VGLEEVTGVPVPGVPRKDYTRSDSENWRTLREEQEEGADPGGSWRLAGARRLDDGGPRSA
GWREHDGPVEGRRRKFEFDFGGGRRRAGSEGLEDDRDGLPEWCTDEEDGEMGTFDASGAF
LPLSKDEEFDFQGIEEEEESLSGMERIMNGGQRVDVKESASDGEVKNRTSPPSSSPPAPP
ALGLNPPMPQLSLTVAELEASQMADSHPLPAPLPAPAPLAVPVPAKASKMPSEVVVPEGS
PAEGSTTQQSPSTSSSLPSPPPSASSSSAATHLPPPPGGDTEDDEGMKHLQQEAEKMVAS
LQDTSLEEECFTQMLQESRNTASALPLSHDAAMKWFYKDPQAEIQGPFTTLEMYEWFQAG
YFSMSLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLGNMDQDRLKKQQQQDLAAA
ALYQQLQQQQQLFQLINRCGEQGMMPSVNRSMSVPDTGSMWDMHTSASQQSGGEASLWDL
TMNSSTQGPTLEQLQKLQQERREAELRTKREEEEQRKRREEKRRQQEEQKRREEEEIFRR
KQCRQQQELIMKLLQQAPQQGSGSGVGSGWGTGGLNKPGAKGLSLLDMQEAERLLKQQQR
AQQQQRERHQGMSMGQWGDGGVVPGGLWGGGGGMEGKAGGGGAMGLWEEAVKNQSRGGSM
QGLKNSRSSPSLSEQYMLSRRKQRTDEEDKLLKLLQGIKTPQDGFTTWCEQMLHALNTQA
NNTSSPLDVSTIVAYLKEVESPYEVLDFICSYLGDTMEAKEFAKQFLERRAKQKQNQKRQ
QEQLSKEVAGLTMNNFPLQDSMRGVNPSALQSMFQAAHMAKGGMYDPQGGMKKKKQPVML
QSDPSILGYSFHNAGERLSLNEMEMVEDY
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggcccagaatggctccgtgcactatccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagagaacaaggccccagaggacatg
caggataaggagtttgctgctattctgcaagatgagcccatgcagccgctggcactggag
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagcgtggcagtgatg
aggctcatgggtaaaggaggtggagtcgcccctgcgggcatggcccgaggcagaggcact
acacgaggaggaggccgagggcgaggccgaggagagggtggaggattctaccaaagaagt
attgaggagggagaggtgggctttggccgcggagccagagagatctatcgcagccagagc
tgggatgacaggggcgagaggcgttttgagaagcctgcgcgtgccagggagggggtacgt
gttggattagaggaggtgacgggtgtccctgtgccgggggtgccgaggaaggactacaca
cggtctgacagtgagaactggcgtaccctcagagaggagcaagaggagggggccgaccca
ggaggcagctggagactggccggagcacgtagattagatgacggaggtccaaggtctgca
ggctggcgggagcacgacggtccagttgaggggcgtcgcaggaagtttgagtttgacttc
ggcggaggtcgcaggcgggccgggagcgaagggttagaggacgacagagacggactgcct
gagtggtgcactgatgaagaggacggagaaatgggcaccttcgacgcatccggagctttc
cttcccctatccaaggatgaggagtttgacttccagggtatagaggaggaggaagagagc
ctgtctggcatggagaggatcatgaatggaggacagagagttgacgtcaaggaatcagcc
agtgacggggaggtgaagaacagaaccagtcccccctcctcctctccccctgcccctcca
gctctgggcctcaacccccccatgccccagctctccctcacagtggctgagctggaggcc
tctcagatggccgacagtcaccctcttcctgctcctctccctgctcctgctcctctcgct
gttcctgtccctgccaaggccagcaagatgccaagtgaagtagtagttcctgaaggatca
ccagcagagggctccaccacccagcagagccccagcacctcctccagtctgccttcaccc
cctccctccgcctcctcctcctctgctgctacccacctccccccgccaccagggggtgac
accgaggacgacgagggcatgaagcacctacaacaggaggcagagaagatggtggcgtcc
ctgcaggacacgtctctagaggaggagtgttttacccagatgctacaggagagcagaaac
acagcctctgccctgcccctctcccacgacgctgccatgaagtggttctacaaggacccc
caggcagagatccagggtccgttcaccactctggagatgtacgagtggttccaggcgggc
tacttctccatgtctctgctggtgaagaggggctgcgacgagggcttccagccgctgggc
gacgtcatcaagatgtgggggcgcgtgcctttcgcccccgggccctccccaccgcccctg
ctgggtaacatggatcaggaccgcctgaagaagcagcagcaacaggacttggcagcagca
gctctctatcagcagctccagcagcagcagcagctattccagctcatcaacaggtgtgga
gaacagggtatgatgccttcagtgaacaggtcgatgtcagtgccagatacagggtccatg
tgggacatgcatacctcagcttcacagcaatcaggcggtgaagccagtttatgggactta
acaatgaattcttcaactcagggtccaacactcgaacagcttcagaagctccagcaggag
aggagggaggctgaactcaggacgaagcgcgaagaggaggagcagcgcaagaggagagag
gagaaaaggaggcagcaggaggagcagaagaggagggaggaggaggagatcttcagacgc
aaacagtgtcgccagcagcaggagctaatcatgaagctcctccagcaggcccctcagcag
ggctcaggctccggggtggggtctggctggggcactgggggcctcaacaagccaggggcc
aagggcctcagtctgctggacatgcaggaagctgagaggcttctcaaacagcagcagaga
gcccagcagcaacaaagggaacgccatcaaggcatgtccatgggtcagtggggggacgga
ggtgtggtcccagggggcctgtggggaggcggaggggggatggagggtaaggctgggggc
ggaggggccatgggtctgtgggaggaggcagtgaagaaccagtccagaggtggcagcatg
cagggtctgaagaacagccgcagcagcccctcactcagtgagcagtatatgttaagtcgt
aggaagcagcgtacggatgaggaggacaagctgctgaagctgctgcagggcatcaagacg
cctcaggacgggttcaccacctggtgtgaacagatgctgcacgccctcaacacccaagcc
aacaacacctcctccccactggacgtgtccacaattgtggcgtacctgaaggaggtggag
tctccctacgaggtgttggactttatctgctcctacctgggagacaccatggaagccaaa
gagttcgccaagcagttcctggagcgccgtgccaaacagaagcagaaccagaagaggcag
caggagcagctatcaaaggaagtagcagggctgaccatgaacaacttccctctgcaggac
tccatgcggggcgtgaaccccagcgcactgcagtctatgttccaggcagcccacatggct
aagggagggatgtacgacccccaggggggcatgaagaagaagaaacagcccgtgatgctg
cagtctgaccccagcatcctaggctactcgttccacaacgcgggcgagcgcctgagccta
aatgagatggagatggtggaggattactga
DBGET
integrated database retrieval system
