Salmo trutta (river trout): 115198519
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Entry
115198519 CDS
T08542
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115198519 (arhgef40)
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115198519 (arhgef40)
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Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
DHC_N2
CLIP1
IQ_SEC7_PH
PH
WIT1_2_N
Motif
Other DBs
NCBI-GeneID:
115198519
NCBI-ProteinID:
XP_029616354
LinkDB
All DBs
Position
8:22855794..22896368
Genome browser
AA seq
1868 aa
AA seq
DB search
MLSVKQKFLVNNRQHTTRPRCGTTTDLTDHWNRGIFLRGDIYIVSIAVDGWRKRVQESHR
RQCRQPSRSHIMGSEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLL
DYFIPAKHLLHKLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSTDFYLQV
VPFSTRCPRLALKCLAPGGRNVQEVLVPESQHPLVFTTEWLHSVNKERGYKREGGGGLDT
CLVSTCDGVVRLPWEEVVYPKFIHNPSDDLTTMADHPTSVPDHTTNLTPVVGLGLGGWGG
SSSGEPDSCSWDEEDDDLPPDSVDAEAVLPRRRCSEDGLGRTTRHHQMGGEGDYVELLEP
RGGPDGGADPRQRYLEMHGICKTKTLPLCRRSKAIKLRRGKAWGYGRLDAAGGSRGVLGG
KRDSVTPRGDWLPPRPLPRVIDLGRARRSESYPSSLQNSDEGEKQALGKDPEGLGSQGLY
FDGPSKERRPGVGREREGSGCNVTQPCRDSHGSNSLIATEAANHKAAHVVEGQSDQSSRS
ESVFEDADKPLSGDSNTMPTTGTRGSGENAARPLIDIPGNGENVDSPLADGSETQKGRHS
TSDSCVLDEIADSTEHRETERSLTRPGTDTDPKGATTSEERDEGKTEEIGVCPRGNEVKT
GGFRAPRRKRKGRGGKGKAKSGGRGNQKTRDQAGSKPPSKTPQRGPALSPTTNLPITTTN
LSEATQQPEGTDKELTPVNGGQEKAEIGESNTENQVVQSEVSPDTTTSQSGTSLSNHSTE
EVGAETSADLSNGLSPKAPPLLRELDTELLQSGKLMLTGTVDRLGRAVVVTETHLPEDGC
RADEMGRVLACYHRITRSSAKERGLTVIVDSRQSPPSALCLAALKQLQAVVPGGLGSVLI
LVEEQHQESSTHSLEGVEVHTVRGTGVLQQYIDRQQLPLEMDGDYKHCHSDWLAFRLSVE
SLTECCESALSLLEDALQSMDTAPLPDCIKTVPLSVEKHRQLMTSILVDQRLTELQRRGG
AWLAGLANGTSGLAKRSPDCRAALAATSKLYDSVDDSLHRLVQVSNQRGSDLEALGRLAA
MVDKLEKCEREIEQIQDQLEDYREPPISLSRLSLKQQKFKTFRESANELHTETLAVLGDL
ESWSELDWGGLIEVQVRVPPVRERLRDMSHCLSDCWTTLDNTQRLLSTLTEANQWCDVIS
STSPSPSTPLSSLPPIPPSRFQDARALALELGGGALLDLWSQTLERYQRTVAQVKPRLLQ
QAERGQNQGQARPKTPSTSSLWDLMGPEGEGDWGVGAGGGEGGLQSWGSLASLFRPQTCS
TLKIGEEKGNKKEGTGGGGGGGGGAGGGKFLQNLLHPAKKSPTEAPLPPKPPRKRHPSFD
LQALLAPRRGPATPRPIEPPVGAASRNSPLTWLGRRALTDPVIAAGMAAAVPGWREGGGG
GVQGGSGVLIRGVEVSSKEVVDYTGTPRQHVLLSRAERETGGERQGTTTAQSKLYLLWCR
MLSSERQYVAVLKGVEETYLPLLEGPDTPSSLRGKADLLFPKWANLSSFHSHNLLPAMEG
ALLQSLLQQDLFSKYSEEFLQYSHYIRTKPELDSPLVIQAADFFKLRLPATPPLSPLSFP
HCLQAPTLRLEQYCDALEELGGLNPASDSSLSVLRHVQRHGEDLRASDLIVGCPVPVAER
GELVRQGELLVCGGTRRKKTGVRSVFLYQHLIIFTKQKSPGPGRTAYSFKHSIKTGEMGL
TQSVGEEGVKFEVWVRQAPRIRDCLTLQCQSGEGRAAWTHDIAQLLWTHAIHNTELCLKE
TMCIGVSSKMLLDVTGAPATSELDSIYNLNDRVHSSCSDSSSVGSQKEGGSPASGRGQTQ
NQSPSTAV
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctgtgaaacaaaagttcttagtcaataaccgacaacacactacccgaccacgt
tgcgggactacaacggatttaacggaccattggaataggggaatattcttgcgtggagac
atttatatagtctctatagcagtggatggttggaggaagcgggtccaggaaagtcacaga
cgacaatgtaggcagcccagccggagtcatatcatgggctcagaggcagtggaagattgt
gtgcagggggctctctcgtccctctacccccccttcgagagcacagccccgcctctcctc
tctcaagttttctccgtgttggagtcaacttatcagcatgacagtctgaggtacctgctg
gactacttcatcccagcaaaacaccttcttcacaaactacagcagcatgcctgttctcag
tatctgggctgtctgttcctccactccggttggcccctctgcctcggagagaaggttgtg
gtccagctctctactctggactggaggctgctgcgaagtaccgacttctacttgcaggtg
gttcccttctccacacgctgcccccgcctggccctcaagtgtttggcccccgggggccgc
aacgtccaagaggtcctggtgcccgagtcacagcaccccctggtgttcactacagagtgg
ctgcacagtgtcaacaaggagaggggctacaaaagagaaggaggtggagggttagatacg
tgtctggtcagtacgtgtgacggggtggtccgcctaccgtgggaggaggtggtctacccc
aagttcatccacaacccatcggacgacctgactaccatggctgaccacccaacctccgtc
cccgaccacaccaccaacctcaccccggtggtgggcctcggcctgggtggctgggggggc
tcctcctctggagaaccagactcttgttcctgggacgaagaagacgatgacctacctcca
gacagtgtagatgcagaggccgttctaccccgccgacggtgcagcgaggacgggttaggg
aggacgacgaggcatcaccaaatgggtggtgagggggattacgtggaactcctggagccc
agggggggtccggacggcggcgcggaccccaggcagaggtacctggagatgcatgggatc
tgtaagaccaagaccctgccgctgtgtaggaggagcaaggctatcaagctccgcagaggg
aaggcctgggggtacgggcggctggacgcagccgggggcagtaggggtgtcctggggggt
aagagggactctgtgaccccccggggggactggttaccccctcgccccctgcctagagtc
atcgatctaggccgagcgagacggtctgagtcgtacccctcctcgcttcagaactctgac
gaaggggagaaacaggccctcggaaaagacccagaaggcctaggaagccaggggctgtat
tttgatggtccgtccaaggagaggaggcccggggtgggcagggagagggagggcagtggg
tgtaacgttacacagccatgcagggacagccatggaagtaacagtttgatagcgactgag
gcagcaaatcacaaagcagcgcacgttgtagagggccaatcggatcaaagctctcgctct
gaatctgtgtttgaggatgctgataagccactgagtggagacagcaacaccatgcccact
acaggcacacgaggaagtggggagaatgcggcgaggccattgattgatattccaggaaat
ggggagaatgtggacagcccattggcagatggatctgaaacccagaaaggaagacattcc
actagtgactcttgtgtactagacgaaatagcagactcgacagaacacagggagacggaa
cgttctctcactcgacccggtactgacactgacccaaagggagcaacaacttcagaagag
agggatgaaggaaagacggaggagataggagtgtgtcctagaggaaatgaagtaaaaacg
ggaggattcagggcacccaggaggaagaggaaagggagagggggaaaggggaaggctaaa
agtggtggtcgtggcaaccagaagactcgagaccaggctggttccaaaccaccaagtaaa
acacctcagcgtggtcctgccctctccccgacaaccaacctgccaatcactacaaccaac
ctatcagaggcaacacagcagcctgaggggacggataaagagctcacaccagtcaatgga
ggacaagaaaaagctgagattggggaaagcaatacagaaaaccaggttgtccaatcagaa
gtctcacctgacacaactactagccaatcaggcacatccttatctaaccactctacagag
gaggtgggggcagagacatctgctgacctatcaaatggcctatcacctaaagcccctcct
ctcctaagggaattggacacagaactcctccaatcaggaaagctgatgttgacaggtacg
gtggacaggctgggacgggctgtggttgtcactgaaacgcacctcccagaggacggttgc
cgtgcggatgagatgggccgtgtcttggcctgttatcacaggatcacccgctcttctgct
aaagagcgaggcctaacagtaatagtagacagtagacaatctcctccctccgctctctgc
ctcgctgcactgaaacaattacaggctgtggtcccgggaggtcttggctctgtcctcatt
ctggtggaggagcagcaccaggagtcatctacacacagtctagagggagtagaggtgcac
acggtgcgagggacaggggtccttcagcagtatatagacaggcagcagctgcccctggag
atggacggagactacaaacactgccactctgactggctggccttcagactgagtgtggag
agtctaactgagtgttgtgagagcgcactctctctgttggaggatgcactgcagtctatg
gacacagcaccactaccagactgtatcaagactgttcctctaagtgtggaaaaacacaga
cagctgatgacgagcatcctagtcgaccaacggctgactgagctgcagcggaggggtggg
gcctggctggcagggctggccaatggcacatcaggactggcaaagcggtccccagactgc
agagctgctctggctgcgacctctaaactctatgacagcgtggatgattccctccaccgc
ctcgtccaggtgtccaatcagaggggcagtgacctggaagccctcggacgattggctgcc
atggtggacaagctggaaaagtgtgagagggagatagagcagatccaggatcagttggaa
gactacagggagcctcccatctctctcagcagactctccctcaaacagcagaagttcaag
actttcagagagtcggccaacgagctgcacactgagaccctggcagtccttggagatctg
gagagctggtctgagctggactgggggggactgatagaggtgcaggtcagggtaccaccg
gtcagagagagactcagagacatgtctcactgtctgtctgactgctggacaacactggac
aacacacagagactactgtccacactgaccgaggccaaccagtggtgcgacgtcatctcc
tccacctcaccctccccctccacccccctctcctccctccctcctattccgccgtctcgt
tttcaggacgcccgggccttagccttggagctgggtggtggagctctcctggacctgtgg
tctcagacccttgagagataccaacgcactgtggcccaggtcaaacccaggctgctgcag
caggcagagcgagggcagaaccagggccaggcccggcccaagaccccctccacctccagt
ctgtgggacctgatggggcccgagggagagggagactggggtgtgggggccgggggaggg
gagggaggcctccagtcctgggggtccctggcttcactgtttcgcccacagacctgctcc
acgctgaagataggagaggagaaagggaataagaaggagggaacgggaggaggaggagga
ggtggaggaggagcgggaggagggaagtttctgcagaatctgctgcatcctgcaaagaag
agccccacagaagcccctttgccccccaaaccccccaggaagcgtcaccccagcttcgac
ctccaggccctgctggccccccgtcggggccctgccacccccaggcccatagagcctcct
gtgggtgcagccagccgtaactcccccctcacctggctgggacgccgggccctcacagac
cctgttatcgccgctgggatggcagccgccgtccccggatggagagagggaggaggagga
ggggtgcaggggggatcaggggtgctcatcagaggtgtagaggtgagcagcaaggaagtg
gtggactacaccgggacgccaagacaacacgtgctgctgagccgagcggagagggagacg
ggaggggagaggcagggcactaccaccgcacagagtaaactgtacctattgtggtgcagg
atgctgagttcagagaggcagtacgtggccgtattaaagggggtggaagagacctacctg
cccctcctggagggtccagacaccccctcctccctcagggggaaagcagatctcctgttc
cccaaatgggccaacctcagctccttccactcacataacctcctcccagccatggaggga
gctctactgcagagtctgctgcaacaggacctcttcagtaaatacagtgaggagtttctc
cagtactctcactacatcaggactaaaccagaattggactccccgttggttattcaagct
gcggacttcttcaagctcagactcccggccacccctcctctctcccccctgtcgttcccc
cattgtctccaggcccctacactgaggctggaacagtactgcgatgccttggaagagctg
ggagggctaaaccctgcttccgactcctccctctccgtcctcagacacgtccagcgtcac
ggcgaggacctccgggccagcgacctaatcgtcgggtgtccggtcccagtggcagagcgc
ggagagctggtgcgtcagggggagctgttggtgtgtggggggaccaggaggaagaagaca
ggggtgaggagtgtgttcctctatcagcacctcatcatcttcaccaagcagaagagtccc
ggcccaggacgcaccgcctacagcttcaaacacagcatcaagacgggtgagatgggtctg
acccagagtgtgggtgaggagggggtgaagttcgaggtgtgggtgcgtcaggcccctcgt
atccgggattgcctgaccctgcagtgtcagagtggagaggggagggccgcctggacccac
gacatcgctcagctcctctggactcacgctatacacaacacagagttgtgtctgaaagag
accatgtgtattggtgtgtctagtaagatgctgctcgatgtcacaggagcaccggcaaca
tctgaactcgactctatctacaatctgaatgacagagtccacagtagctgttcagactct
tcctctgttggcagtcagaaggagggggggtccccagcctctgggaggggacaaacacag
aaccagtctccttccactgcagtgtaa
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