Salmo trutta (river trout): 115198555
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Entry
115198555 CDS
T08542
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115198555
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115198555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115198555
NCBI-ProteinID:
XP_029616432
Ensembl:
ENSSTUG00000015409
UniProt:
A0A673YNF8
LinkDB
All DBs
Position
8:23835484..23840724
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AA seq
291 aa
AA seq
DB search
MYNMMEHELKPSGQQQSHQTAMSPVTGNSHPGSKSLCPPGGDPMDKVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKDYPDYKYKPRR
KSKPLLKKDNQMGKYPLSAGNLLAAAAAQGQGGSPRMESYGWGPAGGYAGMQSEALGYTQ
QLHRYDLSALQYPQAMTAAQTYMNGANTYSPMSYSSSHQQPNPVMSMVKPEPVSHSPTGG
PNHHRGPLQGDLRDMISMYIPGGDTNDPVSQRGGYSVQQHYLSGTVPLTHI
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaacacgagttgaagccctctgggcaacagcagtcgcaccaaacc
gccatgtctccggtcaccggcaactctcacccggggtccaaatccctgtgtcctccgggc
ggggaccccatggacaaggtcaaaagacccatgaacgccttcatggtctggtctaggggc
cagcgccgcaagatggcccaggagaaccccaagatgcacaactctgagatcagcaagcgg
ctgggcgccgagtggaagctactgactgatgctgagaagcggccattcattgacgaagca
aagcgcctcagggcggtgcacatgaaggattaccccgattacaaatacaaaccacgccgt
aaatccaagcccctgctcaagaaggacaaccagatgggaaagtaccctctctctgccggg
aacctgctggctgcggccgctgcgcagggccaaggtgggagccccaggatggagagttac
gggtggggcccggcgggtggttacgccgggatgcagagcgaggccctgggctacactcag
cagctgcaccgctacgacctgtccgcgctccagtacccccaggccatgaccgcagcacag
acctatatgaacggcgccaacacttacagccccatgtcttacagcagcagccaccagcag
cccaacccagtcatgtccatggtgaagccagagccagtgtcgcactccccgactggtgga
cctaaccaccaccgcgggcctctccagggggacctgagggatatgatcagtatgtacatc
cccgggggggacaccaatgaccctgtctcccagagaggaggctacagcgtccagcaacac
tatctcagtgggactgtgcctctcactcatatctag
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