Salmo trutta (river trout): 115198638
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Entry
115198638 CDS
T08542
Name
(RefSeq) transcription intermediary factor 1-alpha-like
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stru01001
]
115198638
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115198638
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115198638
Protein kinases [BR:
stru01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
115198638
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115198638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
PHD-1st_NSD
PML_CC
zf-C3HC4
PRANC
DUF1351
ParB
DUF5054
Motif
Other DBs
NCBI-GeneID:
115198638
NCBI-ProteinID:
XP_029616580
Ensembl:
ENSSTUG00000041126
UniProt:
A0A674DAJ7
LinkDB
All DBs
Position
8:complement(28813595..28849503)
Genome browser
AA seq
1157 aa
AA seq
DB search
MDESPEAAVDNDDLVIIVENEAESLPAEEERAKQLGGSIGLMDTCPVCKLNFHNREPKLL
PCLHSFCKKCLPPPSRNLVNTEQRRDPQLQADNSKPLNVIRCPVCRQECWEVEVLDNFFV
KDSVEVPSSTVEKTSQVCMSCDDNTEATGFCVECVEFLCVTCIEAHQRVKFTRDHTIRQK
EEMSPEAVGASSQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRN
HRQHLENMTHQLQEKRKAIEEVSNCINNGLQQVDENRKSVTNEIKKSICNLIMEINRKGK
ILVNQLETLTKDHEVGLKKQQEDVSHLTRHLDHVINFTKWATASHSGTALLYCKRLILCQ
IHYLMRANCNASIVPQSSVRFQCRSGFWASNVDLGSLAVERIPGRQPSSMQQGFPPGHPS
QPGPGPRGEGPPGAFPPGSSAHQRGSTLAQLQLQVEKLAQHPNRAGQPPPNHWSWYQQGL
KLPGPGGPLPQRPHQGGSPSQGPPNMVQIQQPGRSYGPSGPQTHPNPRSPTSMLQNTGFP
PQSLRDLIHNSSFPPKPMDVLQGTSRYSHAPPSNTGPISTQASIHQRNMMEAAQLRRSDP
SGASSSLSMPNPRASYAPSQATAFPDRHAQGRQNSPMSKSSSSEANIGSASWKRTEPNAA
APPSSAKRRRRSSPGPIIVIKDEPEDDDEVSFVQCSVGASASLPDSSTGIQPKPQSQPQQ
QSLPAPMVEPQPEPQPEPQPEPQPEPQPEPQPEPQPEPQPETQPETQVELEADPQPDPEK
APSVPEDDPNEDWCAVCQNGGELLCCDRCPKVFHLNCHIPTLRESPSGEWFCSFCRDLTS
PEMVYNPDSQGELPAMKEEPGSEGFPPVDKRKCERLLLCIYCNEFSTDFQEPASPSSIPE
YKELIETPMDLSIVKSRLESKESPRYCSAEEFVKDVRLIFRNCAKYYQADTEVGGAGLSL
EEYFEEQLKFLYQDRSFPGGREEGMIPPVEDEMEEGMEDDGMAPNEGDMPPVEDDLTPVE
EGMPSMEKEGTEEGMDPVDGELEEEGIPPLEESMEEEETSPVKEDSPPCDATEPVDPSTR
GASSPNLSSKEAPQPLSDTPDNPPCEEEAPQPPSDTPDNPPDSQGTSPADSQGTSPAAGL
ATENDGTTEVRDKAEEE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagcccagaagctgctgtggacaacgatgaccttgttattattgtggaaaac
gaggcagagagcttgccagctgaagaggagagagcgaaacagctaggaggtagcatcggt
ctcatggacacttgccctgtctgtaagttgaatttccacaaccgagagccgaaacttctg
ccatgcctccactctttctgcaagaagtgtcttccacccccttcaaggaacttagtcaac
actgaacaacgtcgcgacccgcaacttcaagcggacaactcgaaaccactcaatgtgatc
cgctgcccagtttgtcgacaagagtgctgggaggtggaggtgctggataacttctttgtg
aaggactctgtggaggttcccagcagcacagtggagaagaccagtcaggtgtgtatgagt
tgtgatgacaacaccgaggccacagggttctgtgtggagtgtgtggagttcctgtgtgtg
acgtgtattgaggcccaccagagggtcaagttcaccagggatcataccatacggcagaag
gaggagatgtccccagaggctgtgggtgcgtcctcacagaagccagtgttctgtgacatc
cacaagcaggagcctctcaaactgttctgtgagacctgtgaccgtctcacctgcagggac
tgtcagctgctcaagcacaaagaccacaattaccagttccttgaagacgcctacagaaac
cacaggcaacacctggaaaacatgacgcatcagctacaggagaagaggaaagccatagaa
gaagtgtccaattgcatcaacaatggactccagcaagtcgatgaaaaccgcaagtctgtc
accaatgagataaagaagtcaatttgcaacttgatcatggagatcaacagaaagggaaaa
atcttggtcaatcaacttgagacactgacgaaggaccatgaggtcggactaaagaaacaa
caagaagatgtcagccacctgaccagacatctagatcacgtcatcaacttcaccaagtgg
gccacagccagtcacagtggcacagctctcctgtactgcaagagattgattctttgccaa
atccattacctaatgagggccaactgtaacgcatccatcgttcctcagagctcagtccgc
ttccagtgtcgctccggtttctgggcctcaaatgtcgatcttgggtctttggcagtagag
agaatccctggtcgtcagcccagttccatgcagcagggcttccctcctggccaccccagc
cagcctggccccggccccagaggagagggccctcccggggctttccctccaggctcctcc
gcccaccagcgtgggagcaccctggcccagctccagctgcaggtagagaaacttgcccag
caccccaacagggctggacagccccctcccaaccactggtcctggtaccagcagggtctg
aagctcccggggccagggggcccccttccacagaggccccaccaggggggttctccgtca
caaggtccccccaacatggtacagatccagcagccgggccggagttacggaccctccggg
ccccaaacccatcccaaccccaggagccccacctctatgctgcaaaacacaggattccct
cctcagtctctgagggatctcatccacaactccagcttccctcccaaaccaatggatgtg
ttacagggtacctcccgctactctcatgcacccccttccaacacaggacccatcagcact
caagcctctatacaccagcgtaacatgatggaagccgcacaactgaggaggagtgacccc
agtggagcttcatcatcattatccatgcccaaccccagagctagttatgctccgagccaa
gctactgccttcccagacagacatgcacaaggaagacagaattcccccatgtccaaatct
tcttcctctgaagccaacatagggtctgcttcctggaagcgcacagagcctaatgcggcg
gctccaccctcctcagctaagcggaggcgaaggtcgtcccccggaccaatcatcgtcatc
aaggacgaaccagaggacgatgacgaagtcagctttgtacagtgtagtgttggagcctca
gccagcctgccagacagcagtacaggcatccagcccaagccccagtcccagccccagcag
caatctctcccagcacccatggtggagccccagccggagccccagccggagccccagccg
gagccccagccggagccccagccggagccccagccggagccccagccagagccccagcca
gagacccagccagagacccaggtagagctagaggcagacccccaaccagacccagaaaag
gccccaagtgtccctgaagacgaccccaatgaagactggtgcgctgtgtgtcagaacgga
ggagaactgctctgctgtgaccgatgtcccaaagtcttccatctgaactgtcatatacct
acacttagagagtctcccagtggtgagtggttctgttcgttctgtcgtgacctgaccagt
cctgagatggtgtataacccagatagccagggagaattgccagccatgaaggaagagcca
ggatcagagggattccctccagttgataaaaggaaatgtgagagactgttgctctgcatc
tactgcaatgagttcagtacagatttccaggagcctgcctcaccgtcgtcaatcccagag
tataaggagctgattgagactccaatggacctgtccatagtgaagagcaggctggaatct
aaggagagcccacgttactgcagtgctgaggagtttgtcaaggatgtcaggctcatattc
aggaactgtgcaaagtattaccaggctgacactgaggtgggaggtgcaggactgagcctg
gaggagtactttgaagagcaactgaagtttctctaccaagacaggagcttccctgggggc
agagaggagggcatgataccccctgtggaggacgagatggaagaagggatggaagacgat
gggatggctcctaacgaaggggatatgccccctgtcgaggacgacctaacacctgttgaa
gaagggatgccttctatggagaaagaaggaactgaagaggggatggatcctgtggatgga
gagttggaggaagaagggatacctcctttagaagagagcatggaagaggaagagacttct
ccagtgaaagaagactcaccaccttgtgatgctactgaaccagtagatccatcaacaagg
ggtgcatcatcgcccaacctttccagcaaggaggctccccaacccctctcagatactcca
gacaaccctccctgcgaggaggaggccccccaacccccctcggataccccagacaaccct
cctgactcccagggcaccagccctgctgactcccagggcaccagccctgctgcaggctta
gccacagaaaatgatgggacgactgaagtgagagacaaagcagaagaggaatga
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integrated database retrieval system
