Salmo trutta (river trout): 115198649
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Entry
115198649 CDS
T08542
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 1 isoform X1
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04310
Wnt signaling pathway
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115198649
09133 Signaling molecules and interaction
04519 Cadherin signaling
115198649
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115198649
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
stru04030
]
115198649
04515 Cell adhesion molecules [BR:
stru04515
]
115198649
Peptidases and inhibitors [BR:
stru01002
]
Mixed peptidases
Family P2
115198649
G protein-coupled receptors [BR:
stru04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
115198649
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Major cadherins
115198649
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
7tm_2
Cadherin_CELSR2_9th
Laminin_G_2
GAIN
GPS
Ig_CLSTN
Cadherin_FAT4_N
Laminin_G_1
EGF
Ig_Cad99C_N
EGF_laminin
EGF_TEN
Dicty_CAR
hEGF
ConA_2nd_BAM2
Frizzled
Motif
Other DBs
NCBI-GeneID:
115198649
NCBI-ProteinID:
XP_029616616
LinkDB
All DBs
Position
8:complement(30611097..30738028)
Genome browser
AA seq
3103 aa
AA seq
DB search
MELPMNWIWVCVLFNVPLLGCFELHLSETLQTGTVLANLSLGPGWTYKIDRTLTPKYIQN
FLQVEWQEGALRMYRKVDCVRLLRNPVPVYIRIGSLTSENFVLTHFNTFVHGQDCFIKYK
RKSTIGKPDIHINYFSELEATSCLSAGNLLVNVTELLPAFSRNTTFSASCTTGKDLRAVF
KHGNILLDDNYCLGEGELSEVHLYCTLRALSDRRVRVSVRVRLRLVTVVEGETHEQLSPS
HTIQIVPGKRNHRKRRNVNTPPQFQLPNYQVSVPENEPSGTRVITLKATDPDDGEAGRIE
YGMEALFDSRSNDYFVINPQTGAITTVQPLDREVKDTHVFKVMVTDNGSPRRSATSYLTV
TVSDTNDHSPVFEQTEYRVTIRENVEVGFEVMTIRATDGDAPSNANMVYKIVNSGGVNAG
FEIDPRHGLVRIRERPDRETMSQYQLIVEANDQGKDPEPRSATATVNISVEDENDNYPQF
SEKRYVVQIPENVAVNSKVTQVEATDKDEGNNAKVHYSIISGNVKGQFYIHSPTGVIDVI
NPLDYEMIREYNLRIKAQDGGRPPLINGTGMVVVQVVDINDNAPMFVSTPFQATVLENVA
IGYSVIHIQAIDADSGNNARLEYRLTDTSPGFPFTINNSTGWITVAAELDRETTEFYTFG
MEARDCGIPAMSSSASVSITVLDVNDNIPTFTEKVYSLKINEDAVVGTSVLTVTAIDRDV
NSVVTYQISSGNTRNRFAITSQSGGGLITLALPLDYKQERQYVLTVTASDGTRYDMAQVF
INVTDANTHRPVFQSANYQVMISEDRPIGSTVVIISATDEDTGENARITYIMEDNVPQFK
IDPDTGAITTQMEIDYEDQASYTLAIIARDNGIPQKSDTTYVEIIILDANDNTPQFLRDM
YQGTVFEDAPIYTSVLQISASDRDSGSNGRLSYTFQGGDDGEGDFFIEPYSGIIRTARKL
DRENVPVYTLKAFAVDKGIPPLKAAVDIQVSVLDINDNAPVFEKDELFIYVEENSPVGSV
LARISATDPDEGTNAQIMYQIVEGNIPEIFKLDIFKGDLTALTDLDYESRTEFVIVVQAT
SAPLVSRATVHIRLLDINDNDPVLQNFEIIFNNYVTNKSNSFPSGIIGKVPAHDPDVTDK
LHYSFESGNELNLLVLNADTGELKLSRDLDNNRPLEAPMTVSVSDGIHQVTALCTLRVTI
ITDDMLTNSITVRLENMSQERFLSPLLSLFLEGVAAVLSTSRQAVFVFNIQNDTDVRGAI
LNVTFSALQPGGPPGRYFPSEELQEQIYLNRTLLRLISSQQVLPFDDNICLREPCENYMK
CVSVLKFDSSPPFISSDTVLFRPIHPINGLRCRCPAGFTGDYCETEIDLCYSGPCRNNGK
CRSREGGYTCECQEDFTGEHCEVNARSGRCVPGVCKNGGKCVDLLVGGFMCQCPPGEYEK
PYCEMTTRSFPGRSFITFRGLRQRFHFTVSFMFATRERNALLLYNGRFNEKHDFIALEII
EEQIQLTFSAGESKTVVHPFVPGGVSDGQWHSVQLHYYNKDSLHLLGSSGVLGVPLYTAW
LELTHKEPNIGRLGIPHGPSGEKVAVVAVDDCDIAMAVRFGNQIGNYSCAAQGTQTGQKK
SLDLTGPLLLGGVPNLPEDFPVRNRDFVGCMRNLSIDSKPTDMASFIANNGTTAGCPAKM
NFCIKDLCQNGGVCVNKWNTYSCDCPLGYGGKNCEQVMPSPQHFDGQALVSWSDLDITIA
VPWYMGLMFRTRQGTGTLMRANAGDSSTVSLLISDQYVRFEVFLGSERVAVLGFPQVRVN
DGEWHHVLVELKSVKDGKDMKYMALVSLDYGLYERSVEIGNELPGLRLRALYLGGLPGVG
NHVHDGFTGCIQGVRMGETSTNVVNVNMLQGFKIHVEDGCDLADPCDSNICPENSHCSDD
WSTHTCICDPGYFGRECVDACHLNPCEHVSTCVRKPSSSHGYTCECGQNYYGQYCENKVE
KPCPRGWWGNPMCGPCNCDISKGFNPDCNKTSGECRCKDNYYRPKDEDTCYPCECFPLGA
HSRTCDTHTGQCPCKAGVIGQQCNRCDNPFAEVTATGCEVVYEGCPKAFDQGIWWPKTKF
GRPAAMNCPKGSIGTAIRHCNDEKGWLPPELFNCTTVSFSQLMKMNEEMHRNESRMDGKR
SKAIVRLLHNATNHTNSYYGNDVKTAFQLLTRVLQYESQQTGFDLTATRDAEFNENLVRA
GSAILDPGTRDHWEQIQRSEGGTAHLLRHFEDYTNNLARNMRKTYLIPFTIVTDNMIIVV
DYLDTSVPEQASLPRFHEIQEYYPKDLTSSVHFPQFNTRPQEVPNKVVEPSPSIKPSQTD
APEEDHTLSNKRRRHVEPAAPLPVAVVIVFRSLGQLLPERYDPDRRSLRLPNRPVINTPI
VSTLVYSEGSPLPSPLDPPITLEYTLLETEERTKPVCVFWNHSIAIGGTGGWSSKGCELL
NRNNTHISCQCDHMSSFAVLMDISKREHGDVLPLKIVTYTTVSASLVALLLTFILLALLR
KLRSNLHSIHRNLVAALFFSELVFLIGINQTDNPFVCTVIAILLHYFYMCTFAWMFVEGL
HIYRMLTEVRNINHGHMRFYYAMGWGIPAIITGLAVGLDPQGYGNPDFCWLSVHDTLIWS
FAGPISVVVLVNIVIFVLAAKASCGRRQRSFEKSGAIPALRIAFLLLLLISATWLLGLMA
VNSDVMTFHYLFAIFSCLQGIFIFFFHVIFNKEVRKNLKNVFTGKKGSPDESSTTRASLL
TRSLNCNNTYTEDGPLYRSAIGESTVSLESAVRSAKSHSSYLAYTVRGDSGQKPSVSSVT
AKAGHTDMDGSLFHRNGTKGGDDSDSDSELSVDEHSSSYASSHSSDSEDDDMDIKPKWNN
ERQPQHSTPKGTSIAPKVEAVSNHVKPYWPKEATTASDSEDPGGAERLRVETKVNVELHQ
ENKLNHVGERGETPQDRETPTRENGPPSLPSNGPSNGPPSLPNSTHQPEPKKGILKNKIT
YPPPLTDKNMKNRLREKLSDYNPPTISSSIPPPIIPPSKTPSVASNDGVHPVSVGKSNSV
IIKPLIAPRPQLPQNGGVAMSMKAITTNGGNESDSDGSNETSI
NT seq
9312 nt
NT seq
+upstream
nt +downstream
nt
atggaattaccgatgaattggatctgggtttgtgttctattcaatgtgcccttgctggga
tgtttcgagctacacctttcggagacgttacaaactgggaccgttttggcaaatttgtcc
ctggggcccggttggacttacaaaatcgacaggactttaactcctaaatacattcagaac
tttttacaagtggaatggcaagaaggagctctccgtatgtatcgaaaagtggattgtgtg
cgcttattgaggaacccagtgcctgtctatatcaggatagggtcgttgacgtctgaaaat
tttgttttgacacatttcaatacatttgtacacggacaggactgttttatcaaatacaag
agaaagagcacaataggtaagcccgacattcacatcaattacttttccgaactggaagca
acttcctgcttatccgcgggtaatttgcttgtgaatgtaacagaacttttgcctgccttt
tcgcgaaataccactttttctgcctcatgtactactgggaaagacttgagagcagttttt
aaacatggcaatatattgctggacgacaactactgtttgggtgaaggagagctgagcgag
gtgcatttgtattgtacactgcgtgctctgagtgaccggcgcgtccgcgtctccgtgcgc
gtgaggttgcggttagtgacagtggttgagggagagacccatgagcagttgtcaccgtca
cacaccatccagattgtgcctggcaaacggaaccaccgaaaacggagaaatgtgaacacg
cctccccagtttcagctccccaactaccaggtgtctgttcccgagaatgaaccatcaggg
acccgcgtcatcacactgaaggccactgatccggatgatggagaggccggtagaatagag
tatggaatggaggccctctttgacagcagatccaacgattattttgtaataaaccctcag
acaggtgctattacaacagtgcagcctttagacagggaggtcaaagacacacacgtcttc
aaagtaatggtaacagacaacggctccccacggcgctcagccacgtcttacctcaccgtg
acggtcagcgacaccaacgaccacagcccggtgttcgagcagactgaataccgggtaacc
atacgggagaatgtagaggtgggttttgaggtcatgaccataagagccacagacggggac
gctccctccaacgccaatatggtctataaaatagtcaacagcggcggagtgaacgctggt
tttgagatcgacccacgccacgggctagtgaggatcagagagcgacccgacagagagacc
atgtcccagtaccagcttatcgtggaagccaacgaccaggggaaagaccctgaaccccgg
agcgccacggccactgtcaacatctctgtagaggacgagaacgacaactacccccagttc
agtgagaaacgttacgtggttcaaatccctgagaacgtggctgtcaactctaaagtcact
caagtcgaggccacggacaaagacgagggaaacaatgctaaggtccactacagcatcatc
agtggcaacgtgaagggacagttctacatccactctcccactggggtcatcgatgtcatt
aatcccctggattacgagatgattagggagtataatttacggattaaagctcaggatggt
ggcaggcctccgttgatcaacgggactgggatggtggtggtccaggtggttgacataaat
gataacgctcctatgttcgtcagcacgcctttccaagccactgtgctggagaatgtggcc
attggctactcagtaatccacatccaggctatagacgctgattctgggaataacgcacgt
ctagagtaccgtctcactgacacctcccctggtttccccttcaccatcaacaatagcact
gggtggatcacagtcgccgcggagctcgacagggaaaccaccgagttctataccttcggc
atggaagcgagggattgtgggatacctgcgatgtcatcctcggccagcgtgagcatcacg
gtcctagatgtgaacgacaacatcccgaccttcacagagaaggtgtattctctgaagatt
aatgaggatgctgtggtggggaccagtgtgttgacagtgacagccatcgacagggatgta
aatagcgtcgtaacctatcagatctctagcggcaacaccaggaaccgtttcgccatcacc
agtcagagtggaggcgggctcatcaccttggcgttacccttagactacaaacaggagcgc
cagtatgtcctgacggtgactgcgtcagacggcacacgttatgacatggcacaggtgttc
atcaacgtcacggatgccaacacgcaccgtcctgtgttccagagcgccaactaccaggtg
atgattagcgaggaccggcccattgggtccaccgtggtcatcatcagtgccaccgacgaa
gacacgggtgaaaacgctcgcatcacgtacatcatggaggacaacgtcccccagtttaag
atcgaccccgacacgggcgccatcaccacacagatggagatagactacgaggaccaggcg
tcgtacacgttagccatcatcgccagggacaacggcattcctcagaagtccgatacgacc
tatgtggagataataatcctggatgccaacgacaacacacctcagttcctacgggacatg
tatcagggaactgtattcgaggacgcgcccatttacaccagcgtgctccagatatctgcc
tccgacagggactccgggtccaacggaaggctgagctacaccttccagggtggagatgac
ggggagggggacttcttcatcgagccctactctggcatcatcagaacagccaggaagcta
gacagagagaacgtgcctgtgtataccctgaaggccttcgctgtggataaggggattcct
cctctcaaagcagcggtggacatccaggtgtcggtgctggatatcaacgacaatgcgccc
gtgttcgagaaggacgaactgtttatctacgtagaggagaacagtcccgtcggttccgtc
ttggctcggatcagcgccaccgacccagatgagggaaccaacgctcagatcatgtaccag
atcgtggaggggaacatccctgagatcttcaaattggacatcttcaaaggcgacctcacc
gccctcacggacctcgactacgagtctagaaccgagtttgtcattgtggtccaggccacg
tccgctccgctcgtcagccgcgccacagtccacatccgtttactcgacatcaatgacaac
gacccggttctgcaaaactttgagattatcttcaacaactatgtgaccaacaagtccaat
agtttcccctcagggatcatagggaaggtgcctgcccatgacccggacgtgacggataaa
ctccactacagctttgagtcagggaatgagctgaacctactggtgctgaatgcagacacg
ggggaactaaagctcagcagagacctggataacaacagacctctagaggcccccatgact
gtctccgtctcagacggtatccatcaggtcacagccctgtgcaccctgcgtgtcaccata
atcacagacgacatgttgaccaacagcatcacggtgcgcctggagaacatgtctcaggag
cgcttcctgtcccctctgctgtccctcttcctggagggtgtggcagccgtgctctccacc
agccgccaggccgtctttgtgttcaatatccagaatgacacagacgtgcggggcgccatc
ctcaacgtgaccttctcggcgctgcagccagggggtcccccagggaggtacttcccctcc
gaggagctgcaggagcagatctacctgaaccgcaccctgctccgactaatatcgtcacaa
caggtgcttcccttcgacgacaacatctgcctgagggagccgtgtgagaactatatgaag
tgtgtgtctgtgctgaagtttgacagctccccgcccttcatctcctccgacacggtgctg
ttccggcccatccaccccatcaacggtctgcgctgccgttgtcctgcaggctttaccggg
gactactgcgagacggagatagacctctgctactcaggaccctgcaggaacaacgggaag
tgtcgcagccgagagggaggctatacctgcgagtgtcaggaagacttcactggtgagcac
tgtgaggtgaacgcccggtcagggcggtgtgtcccgggggtgtgtaagaatggggggaaa
tgtgtggacctgctggtgggggggttcatgtgccagtgtcccccgggagagtacgagaag
ccttactgtgagatgaccaccaggtccttccctggtcggtcgttcatcaccttcagagga
ctacgacagaggttccactttactgtctcattcatgtttgccaccagagagaggaatgcc
ctgctgctgtacaatgggagatttaatgagaagcatgactttatcgccttggagattatc
gaggaacagatccaactcaccttctctgcaggagagtcgaagaccgtggtccatcccttt
gttcccggtggggtcagtgacggtcagtggcactctgtccagctgcactactacaacaag
gacagcctgcacctgctggggtccagtggggtgctgggggtccctctttatactgcctgg
ctggagctgacacacaaggagcccaacattggtcgactggggatcccccatggaccctca
ggtgagaaggtggctgtggttgctgtggacgactgtgacattgccatggcagttcgtttt
ggcaaccagatcggcaattactcctgtgctgcccagggaacccaaacaggacagaaaaaa
tcattggacctgacaggaccgctgttgctgggtggtgttcccaacctgcccgaggacttc
cctgtgaggaacagagactttgtgggctgcatgaggaacctgagcatcgacagcaaaccc
accgacatggccagcttcatcgctaacaacggaaccactgcaggttgtcctgccaagatg
aacttctgtattaaggatttgtgtcagaacggaggagtgtgtgtcaacaagtggaacacc
tacagctgtgactgtcctctgggctacgggggcaagaactgcgaacaagtgatgccgtcc
ccgcagcactttgacggccaggccctggtgtcgtggagtgacctcgacatcaccatcgct
gtgccctggtacatgggcctgatgttccggacgaggcaaggcactggcacactgatgcgg
gctaacgctggagactcctctactgtcagtttactgataagtgatcagtacgtgaggttt
gaggtgtttctgggatctgagcgggtagcggtgctgggcttccctcaagtcagggtgaac
gatggggagtggcaccatgtccttgtggagctgaagagcgtcaaagacggcaaggacatg
aaatacatggccttggtgtcactggactacggactgtacgagaggtctgtggagataggt
aatgagctgccaggtctgaggctgagggctctgtatctgggaggattaccaggagtgggg
aaccacgtccacgatggcttcaccggatgcatacagggtgtgcgtatgggtgagacgtcc
accaacgtggtcaacgtgaacatgctgcagggctttaagattcatgtagaggacggctgt
gacctggctgacccctgtgactctaacatctgccctgagaacagccactgcagcgacgac
tggagcacacacacctgcatctgcgacccagggtactttgggagggagtgcgttgacgca
tgtcacctcaacccctgcgagcacgtttccacctgcgtccgcaagcctagctcctcccat
ggctacacctgcgagtgtggacagaactactacggacagtactgcgaaaacaaggttgag
aagccgtgtcctcggggctggtgggggaaccccatgtgtggcccttgcaactgtgacatc
agcaaaggattcaaccctgactgtaacaagaccagtggagagtgtcggtgcaaggataac
tactaccggcccaaggatgaggacacctgttacccctgtgagtgcttccctctaggggcc
cactcccgtacttgtgacacacacaccggacagtgtccctgtaaggccggggtcattgga
caacagtgtaaccgctgtgacaaccctttcgctgaggtcaccgccaccggttgcgaagtg
gtgtacgagggctgtcccaaggccttcgaccaagggatctggtggcctaagaccaagttt
ggccgtcctgcagccatgaactgtcccaaaggatctatcggaactgctatccgccactgc
aatgatgaaaagggctggctgcctcctgaactcttcaactgtaccacagtctccttctcc
cagctcatgaagatgaatgaggagatgcatcgtaacgagtccaggatggatggcaagcgc
tccaaagcgatcgtccgcctgctccacaacgccaccaaccacacgaacagttactatggc
aacgatgtgaagacagcgtttcagctgctgaccagggtcctccagtacgagagtcagcag
acaggcttcgatctcaccgccacgagggacgcagagttcaacgagaacctggtgagagcg
ggcagtgccatcctagaccctggcaccagagaccactgggagcagatccaacgctctgag
gggggtaccgcccacctgctgcgccactttgaggattacaccaacaacctggcacggaac
atgaggaagacctacctcataccattcaccatcgtcactgacaatatgatcattgttgtt
gattacctggacacgtccgtccctgagcaggcctcgctccctcgcttccatgagatccag
gagtactaccccaaagacctcacgtcctctgtccatttcccacagttcaacactaggccc
caggaggtccccaacaaagtagtcgagcccagccccagcatcaagccctctcagaccgac
gcccctgaagaggatcacaccctatccaataagagacgccgccatgttgagcccgccgcc
cccctgcctgttgccgtggtgatagtgttcaggtcgttgggtcagctccttcctgagaga
tacgacccggaccgtaggagcctcaggctgcccaaccgtccagtgatcaacacccccata
gtgagcacgttggtgtacagcgagggttcacccctcccctctccccttgacccccccatc
acactggagtacacactactggagacagaggagaggaccaaacctgtgtgtgtgttctgg
aatcactccatcgcgattggtggtacgggaggctggtcatctaagggatgtgagctgctg
aacaggaacaacacacacatcagctgtcagtgtgaccacatgagcagcttcgctgtgctc
atggacatctccaagagagagcatggtgacgtgttacccctaaaaattgtgacctacacc
acggtgtcagcctccctggtagccctgctcctcaccttcatcctgctggctctactcagg
aagctacgctctaacctccacagcatccacaggaacctggtggccgcactcttcttctcc
gagctcgtcttcctcatcggcatcaaccagactgacaacccgtttgtgtgtacggtgatc
gccatcctgctccactacttctacatgtgtacgtttgcctggatgtttgtggagggcctc
cacatctatcgcatgctgacggaggtcaggaacatcaaccacggtcacatgaggttctac
tacgccatgggctggggcatacctgcaatcatcacaggtctggcagtgggtcttgaccct
cagggctatgggaacccagacttctgctggctctctgtccacgacaccctcatctggagc
ttcgcaggacccatctctgtagtcgtcctggtcaacattgtcatctttgtactggcagct
aaggcatcctgtggacgcaggcagaggtccttcgagaagtctggagccattcctgctctg
aggatagccttcctcctcctattgctcatcagcgccacctggctgttgggcctcatggca
gtcaacagtgatgtcatgaccttccactacctgttcgccatcttcagttgtctgcagggc
atcttcatcttcttcttccatgtgatctttaataaagaagtgaggaagaatctgaagaat
gtctttactgggaagaagggttcacctgatgagtccagcacgaccagagcatctctactg
actcggtctctgaactgtaacaacacgtacactgaggacggtcctctgtacaggtcagcc
attggggagtccactgtttctctggagagtgccgtcaggtcagccaaaagccacagcagc
tacctcgcttacacagtcaggggtgactctggtcagaagcccagtgtgtcgtcggtgaca
gcgaaagcaggacacactgacatggacggatctctgttccacaggaacggcactaaagga
ggagacgactcggactcggatagtgagttgtctgtagatgaacacagctcgtcctatgcc
tcgtctcactcttccgacagcgaagatgatgacatggacatcaagcccaagtggaacaac
gagagacagcctcaacacagcacacctaaagggaccagcattgcacccaaagtggaagcg
gtgtccaatcacgtgaagccttactggcccaaggaggcgacaacagccagtgacagtgag
gatcctgggggtgcagaacggctgagggtggagaccaaggtgaacgtggagctgcaccag
gagaacaaactcaaccatgtaggagagagaggagagacaccccaggacagggagaccccc
actagggagaatggacctcccagtctaccctccaatggaccctccaatgggcctccaagc
ctacccaacagcacccatcaacctgagccgaagaagggcatcctgaagaacaagatcaca
taccctcctcccttgactgacaagaacatgaagaaccgactgagagagaagctgagtgac
tacaaccctcccaccatctcttcctccatccctccgcccatcatccctccatccaagacc
ccctccgtggcctccaacgacggggtacaccccgtatctgtgggcaagagcaacagcgta
atcatcaagccgctgattgccccacgaccacaattaccacagaatggaggcgtggccatg
agcatgaaggcgataacgaccaacggaggcaatgaatcagactcagacggcagtaatgaa
acttccatctga
DBGET
integrated database retrieval system
