Salmo trutta (river trout): 115198695
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Entry
115198695 CDS
T08542
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115198695
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115198695
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
OVT1
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-GeneID:
115198695
NCBI-ProteinID:
XP_029616713
Ensembl:
ENSSTUG00000006298
UniProt:
A0A673XK98
LinkDB
All DBs
Position
8:31934842..31965048
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AA seq
1781 aa
AA seq
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MLILHIASLLTLGWRTFAQMPEFGDVCTEGSCYPATGDLLIGRAHKLTASSTCGIEKPER
FCIVGHLEEEKKCFVCDSREKYDERMNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGKKWQVYRYYSYNCESAFPGISVGPM
VKVDDIICDSRYSDIEPSAEGEVIFRVLDPAFEIEDPYSPRIQNMLKITNLRVQFTKLHT
LGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCAPVDGIHVGTEGMVHGHCMCNH
NTEGLNCEHCKDFYNDLPWRPAEGRNTNACKMCECNYHSRSCHFDMAVYLSTGNVSGGVC
DECQHNTMGRQCEQCRPFYYQHPERHLRDPNICEPCSCDPTGSLQGGVCDGRTDVSAGLI
AGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLSGGSPCDMETGNCFCKR
LVTARNCDRCLPQHWGLSNDMDGCRPCDCDQGGAVNNDCSPISGQCKCREHVYGRRCDQV
ESGFYFIALDHYTYEAEDAKHGPGVTVVPRPYPLNHSPTWTGAGFVKVPEGAHLEFHINN
LPDSMDYDMLIRYEPQLPEQWEQVEIRVIRPYSMRVGQPVSPCDNTLQGGDQQLVSLPPG
SRHVLLPRPVCLEKERNYTVRLSLPLYSSLSDVQSPYTLIDSLVLIPRVRELLLFEGSQG
EGAWDTFQRYRCLESSQSVIKSPMTDICNNYIFSVSALLHQGAMACQCDSQGSLSAVCDP
SGGQCQCRPNVAGRNCDRCAPATFLFSPLGCRRCECSPTGSVNAFCHEATGQCECVPGAS
GRQCAHCLPGYWGFPQCQPCQCNGNSDYCHPQTGECQGCRAFTTGHMCERCLDGYHGDPV
LGLGGHCRPCMCPDGPGSGRQYADSCYQTANNDQLVCVCSPGYRGARCDECAPGHYGNPQ
VPSGRCLPCQCNDNIDQLDPGSCDARTGVCLTCLHHTEGYGCQRCKLGYYGNAATQSCRK
CMCYSVGTTSEACPSPGECHCDLQTGQCPCRPNVIGQNCDHCAPDTFNIGSGKGCQTCDC
DPTHSFGTSCNELSGQCSCKSGFGGRKCNECRDKFWGDPEVKCQACDCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNHCARGYHGTFPACERCHQCFAAWDGVVGELSNQTQRLKDHVTE
LQTSGVTAPYKDTVSSLEISANAISAIVENNPAIQKMEDVQQMMQQATELVADLNERLNV
SEDSLSRLVANANDTEASLDALRKQAQELERTVTDIRDHIKTVKNSNIEGAMDTITKAHL
ESKKAEIRANQTTSYPDNTLEQSATLRREAEARLSQNQAEFDLRQQKHTERLERLATELN
TLDLSELSKQTCGAAGGEEGCAASPCGGVGCVSEDGTLRCGGEGCDGLVTQTQSTLKTAK
DFDQEILSTVQEVDKLSRMVWEVKVRADETKLNAQEVLLKSNQSRDRVVQSNEQLRSLIK
EIRGLLTNDRAKVEVIEAVSNEVLALEMPTSPEQLEALTKEIRDRVGSLTSVEDILSQSA
NDIHTAERLLEQARTASQEVSEMKETAALAKEALEMTEHAQNAAIDAVEQAHNNTRGTLD
LTTSVESATAESELRLSNATLRLLQLERDVTLLRESSLGESHRTQHTERLSEAASQDAEQ
ALQEFDLEVKGKYSVVEGLVVTKAEGVSDARKRAELLQQEAKELLTQTSVKLQRLRELER
SYAANQRTLEAKTVQLAELEETARQLLNDVIQKVMVYSTCS
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgttgatattgcacatcgcatcacttttgaccctcgggtggcgcacctttgcccagatg
ccggagtttggggatgtgtgcactgaggggagctgctaccccgccaccggggaccttcta
atcggccgtgcgcacaagctcaccgcctcctccacctgcggcattgagaagcctgagcgc
ttttgcatcgttggtcacttggaggaggagaagaagtgttttgtgtgtgactccagggag
aagtatgatgagaggatgaaccacaccaccagccacagcatcgaaaacttggtcaccacc
ttcgccccaaaccgcctcaagacctggtggcagtctgagaatggtgtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacacatctcatcatgacctttaagacg
ttccgtccggctaccatggtgatcgagcgttccatggattttgggaagaagtggcaggtg
taccgttactatagctataactgtgagtccgccttccctgggatatccgtgggacccatg
gtcaaagtggacgacatcatctgtgactctcgctactctgacatagagccgtccgcagag
ggagaggtgatattcagggtgctggacccagcgtttgagattgaagacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagttcactaagctccacaca
ctgggtgacaacctgctggactccagagacgaggtcacggagaaatactactacgccctc
ttcgacatggtcgtccgcggcaactgcttctgctacggacatgcctccaaatgcgcccct
gtcgatggaatacatgtaggcacggagggcatggtccatggtcactgtatgtgtaaccat
aacacagagggtctgaactgtgagcactgtaaggacttctacaacgacctgccctggagg
cctgcagagggacgcaacaccaatgcctgcaagatgtgcgagtgtaactaccactccagg
tcatgtcactttgacatggctgtgtatctgtctacggggaacgtgagtggaggagtgtgt
gatgagtgtcaacacaacaccatggggcgtcagtgtgagcagtgcagacccttctactac
cagcaccccgaaagacacctgagagaccccaacatctgtgaaccgtgtagctgtgacccg
acgggctccctgcagggtggcgtgtgtgatggcaggacagacgtgtctgctggtctgata
gcaggacagtgtcgctgtaagaccagtgtggagggagagcgctgcgaccactgtagacag
ggacactacggcctgggacagggaccaaacggctgcctgcagtgtacctgtaatcccctg
ggcacactgtctggaggaagcccatgtgacatggagacaggaaactgcttctgcaaacgc
cttgtcaccgccaggaactgtgaccggtgtctgccgcaacactggggcctgagtaatgac
atggacggctgcagaccatgtgactgcgaccagggcggagccgtcaacaatgattgttct
ccgatatcaggccagtgtaagtgtcgagaacacgtgtatgggaggcgttgtgaccaggtg
gagtcaggattctacttcatcgccctggaccactacacctatgaggctgaggacgccaag
cacggccctggtgtgacggtggttcccaggccctatcccctaaaccatagtcctacctgg
acaggggcagggtttgtcaaggtacctgagggagcccacctggagttccacatcaacaac
ctacctgactccatggactacgacatgctgatccgctatgaaccacagttgccggagcag
tgggagcaggtggagatcagagtgatacgtccttactccatgagagtgggacagccagtc
agcccatgtgacaacacgctacaaggaggagatcagcagttggtgtctcttcctccagga
tccagacacgtgctgctcccgaggcctgtgtgtctggagaaggagcggaactacactgta
cgtctcagtctgcctctctactcctcgctcagtgacgtccaaagcccctacacgctcatc
gactccttggtgttgattccacgggtgcgtgagctgctgttgtttgagggttctcagggc
gagggggcgtgggatacgttccagaggtaccgctgtctggagagcagccagagcgtcatc
aagagccccatgacggacatctgcaacaactacatcttcagtgtgtctgccctgctacac
cagggggctatggcgtgccagtgtgactcccagggctctctcagtgcagtgtgcgacccc
agcggcgggcagtgccagtgtcggcccaacgtggcaggcaggaactgtgaccgctgtgcc
cccgccaccttcctgttcagccccttaggatgcagacgctgtgagtgtagtcctacgggc
tctgtgaacgctttctgccacgaggccacaggtcagtgtgagtgtgttccaggggcgtca
gggcgtcagtgtgcccactgcctgccaggctactggggcttccctcaatgccagccctgt
cagtgcaatggcaacagcgactactgccaccctcagactggggagtgccagggctgccgc
gccttcaccaccgggcacatgtgtgaaaggtgtctggatggttaccatggcgaccccgtg
ttgggtttggggggtcactgccgcccctgcatgtgtcccgacgggccggggagcggacgc
cagtacgcagacagctgctaccagaccgccaacaacgaccagctggtttgtgtctgcagc
cctggatacagaggagccaggtgtgacgagtgtgccccaggtcactatggtaacccccag
gtgcccagcgggcgctgtctgccctgccagtgtaacgacaacatcgaccagctggacccg
gggtcctgcgacgctcgcacaggcgtctgcctcacatgcctgcaccataccgagggctat
ggctgccagcgttgcaagctgggttactacggcaacgccgccacccagagctgcaggaag
tgtatgtgttattcagtgggcacaacgtcggaggcgtgtccgtccccgggggagtgtcac
tgtgacctgcagactggccagtgtccctgccggcctaacgtgattggccagaactgcgac
cactgtgcccctgatacgttcaacattggaagcggaaagggctgccagacctgtgactgt
gacccaacccactcctttgggacgtcgtgcaacgagctgtcagggcagtgctcatgcaag
tcaggtttcgggggaagaaaatgcaacgagtgccgagataagttctggggagaccctgag
gtcaaatgtcaagcgtgtgactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgcgtggagggtgtgtctgggcccaggtgtaaccattgtgcc
agagggtaccatgggacgttccccgcctgcgaacgatgccaccagtgctttgccgcgtgg
gacggcgtggtaggggaactgtccaatcagactcagcgtttgaaggatcatgtgacagag
ctccagaccagtggggtgacggcgccgtacaaagacaccgttagcagtctggagatcagt
gctaatgctatcagtgcgatagtagagaacaaccctgctatacagaagatggaagatgta
caacagatgatgcagcaggccactgagctggtggcagacctgaacgagaggctgaacgtc
tcagaggattccctgtcccgtctcgttgccaatgccaacgacaccgaggccagtctggac
gcactgagaaagcaggcccaagagctagagagaacagtcacagacattcgagaccacata
aagactgtgaagaactctaacatagagggagcgatggacaccatcaccaaggcccacttg
gagtctaagaaggcggagatccgtgccaatcagaccaccagttaccccgacaacactttg
gaacagtcggctacactacggcgtgaagcggaggccagactgagccagaaccaggcggag
tttgacctgagacaacagaaacacacagagagactggagaggctcgccacagagctcaac
actcttgacctatcagagctcagcaagcagacatgtggagcggctgggggggaggagggg
tgtgctgcgtccccctgtggaggggtggggtgtgtgtcggaggacggcacccttcgctgt
ggtggggaggggtgtgacggtttggtcacacagacacaaagcactctgaaaacagccaag
gacttcgaccaggaaatcctctccaccgtgcaggaagtggacaagctctctaggatggtg
tgggaggtgaaggtgcgtgcggacgagaccaagctgaatgctcaagaggtgctgctgaag
tccaaccagagccgagacagagtggtacagagcaacgagcagctccgcagcctcatcaag
gagatacgaggcctactcactaacgaccgtgccaaagtggaggttattgaagcggtgtca
aatgaggtgttggccctggagatgcccacatcgcccgagcagctggaggccctgaccaag
gagatcagagacagggtgggaagcctcaccagcgtggaggacatcctcagtcagagtgcc
aacgacatacacactgcagagaggctgctggagcaggcccgcaccgccagtcaggaggtg
tctgagatgaaggagacagctgccctggcgaaggaagctctggaaatgactgagcatgct
cagaatgctgccatcgatgccgtcgaacaggcccacaacaacaccaggggaacacttgac
ctcaccacatctgtggagtcggcgacggcggagtcggagctgcgtctgagtaacgccaca
ctgcgtctgctgcagctggagagagacgtgactctgctgagagagagcagcctgggcgaa
agccaccgcacacagcacactgagagactgtctgaggccgccagccaggacgcagagcag
gccctgcaggagtttgacttggaggtgaagggtaaatacagtgttgtggagggcttggtg
gtgacgaaggcagagggcgtgtctgatgccaggaagagggcggagctactgcagcaggag
gccaaagagctgctcacccagaccagtgtaaaactacagagactcagagagttggagagg
tcgtatgcagccaaccagcgtactctggaggccaagacagttcagctggccgagctggag
gaaacggcacgccagctgctcaatgacgtcatccagaaagtaatggtctacagcacctgt
tcttag
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