Salmo trutta (river trout): 115198726
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Entry
115198726 CDS
T08542
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
stru
Salmo trutta (river trout)
Pathway
stru04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
115198726
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115198726
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115198726
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
115198726
NCBI-ProteinID:
XP_029616781
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Position
8:complement(33145728..33202497)
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AA seq
598 aa
AA seq
DB search
MDDDFERRRELRRQKREEMRLEAERMAFQGSNEDEEEAARERRRRARQERMRGMGGEEPS
DSVGMTNSHSVTETVSVSSSSMTSSGGGDDDEQALLERMAKREERRQKRLMEALEREKDQ
NPGNDGNHGSGENTVEERSVDRRGRYQDNEEEAEERNCRKEEEGEAAPEEEEEAEQREGE
GEVEEEAVEEEKPRRSYMREQESIEEKTRNEEDTEEPAVVLNEVEESVNSEVEVEEDAEL
SDKVEEEVEEPDQLEVEGTMVTLNNETEEDCGMSTIQNGLDVVNEKQNGGLHEETPQKHK
KPERTLSRGSVCSPEAGAEEQDDTARLEAELKLQELKRRRDDAESEEFERMRQKQQEAEQ
ELEELKKKREERRKIIEGEERQKKQEEAEKKAREEEEKRRMKEEIERRRAEAAEKRQQMG
VETVDAEAKPFKCFSPRGSSLKIGERAEFLSKSAQKSTVKTTHSPVVSKIDNRLEQYTSV
AQNKEMRSPRSGAVDLPMVTDGIRNIKSMWEKGSVFNSPGGGGGTYKEAAGMKIGVAGRI
NDWLNKTPESKTPGGRPADLKPGDVTNKRSLWENKGSSPAKVTGRGENKSVSNGMGHE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgactttgagcggcgccgagagctcaggaggcagaagagggaggagatgcgc
ctggaggctgagcggatggccttccagggtagtaatgaggatgaggaggaggctgcaagg
gagcgtagacgcagggcgcgtcaggagaggatgagagggatgggaggcgaggagcccagt
gacagcgtggggatgaccaacagccatagtgtgacagagactgtgtctgtgtcctcctcc
tctatgacctcctcgggtggaggagacgatgatgagcaggccctgctggagcgcatggcc
aaacgagaggagcgcaggcagaaaagattgatggaagctctggagcgagagaaggatcag
aaccccggcaatgacggtaaccacggcagcggggagaatactgtggaggagaggtccgtc
gaccgcaggggccgttaccaggacaacgaagaagaggcggaagagcggaactgccgaaag
gaggaggagggggaggccgctccggaggaggaggaagaggctgagcagagagagggagag
ggagaagtggaggaagaggcggtggaggaggagaaaccgagacggtcctatatgagagaa
caggaatccattgaggaaaaaactagaaacgaggaagatacagaagaaccagcagtggtt
ttaaatgaggttgaggaatcagtcaattcagaggtagaggttgaagaagatgctgaatta
agtgataaggtagaagaagaggtagaggaaccagatcagttagaggtagagggcacaatg
gtgacactgaacaatgagactgaggaagactgtgggatgtcaaccatccaaaacggcttg
gatgtggtgaatgaaaagcagaatggaggtctgcacgaggagactcctcaaaaacacaaa
aaaccagaaaggaccctgagccgcggcagcgtgtgttccccggaggcgggggcggaggag
caggacgacacggcgcgcctggaggcggagcttaagctgcaggagctgaagcgccgccgt
gacgacgcggagagcgaggagttcgagaggatgagacagaagcagcaggaggctgagcag
gagctggaggagctgaagaagaagagggaggagaggaggaagatcatagaaggggaggag
agacagaagaaacaggaggaggccgagaagaaggccagagaggaggaggagaagaggagg
atgaaggaggagatagagcggaggagggcggaggcggccgagaagagacagcagatgggg
gtggagaccgtcgacgcagaggccaaacccttcaaatgcttcagtcccagaggatcctcc
ctcaagattggtgaaagggcagagtttctgagcaagtcggcacagaaaagcacggtgaag
acaactcactctcctgtcgtctctaagattgacaacagactggagcagtacacctctgtt
gcccagaacaaggagatgcggtccccacgctccggtgccgtggacctgcccatggtgaca
gatgggatacgcaacattaagagcatgtgggagaaaggcagcgtgttcaactcgcccggg
ggcggcgggggcacgtacaaggaagcagctgggatgaagataggtgtggcgggccgcatc
aacgactggctgaataaaacccccgagagcaaaacgccgggaggaaggcccgcggaccta
aagcctggagatgtgaccaacaagagaagtctgtgggaaaacaagggctcctccccagcc
aaggtgactggcagaggggagaataaatctgtctccaacggtatgggacacgaatga
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