Salmo trutta (river trout): 115198801
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Entry
115198801 CDS
T08542
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115198801
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115198801
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
115198801
NCBI-ProteinID:
XP_029616946
Ensembl:
ENSSTUG00000006828
LinkDB
All DBs
Position
8:36437807..36445571
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AA seq
968 aa
AA seq
DB search
MMPKQNVKNLRNFKHEMNPIGDTKCAHIRENLNMVQLSPSPARDVSPSPESPEKGRPGSL
KAGSPKIGSPGGLSSLQLALAASTTIYQGYESYIEDGLICLKHKIRNLEKKKIKLEDYRK
RLKHGDSLNQDQIDAVEKYDEVIHNLQFAQELHKTLGGLTQELLKAQKKALKKEQMAKQE
VERRRLCIVLQVKFLLQTLLQHEHIRKDLLSARNLQVAELQSLLELAELLGVKRDNNVSL
EDQMERAALVYLDLLEGNNKAVAGTTYKVLKAKLAKLMDCGYFDCVPPPPSKSPKEVEDP
MTKKTVSQTASLSTLMMSNKKDVPSREFLNRHYLPDTDPNGCRDTPITPNWKAEFQAMKE
QEPPDSWDMESDSTQPVIQKPWRGAAVLISKVPVTSKKQNAEPKQRRAKSKRERDATAAL
RVDTPVEVFNSQSSLPKDPILRKQQLEDLMTKIRGSFSFMQDSLLDGEGSPTNGHPRLGR
RASGSQSPLAQRDSRRSPVDLLPKTLHSTPLPSKLLPVDDKPSLTNGDGGCLESCDLDLT
TEDLAHVITIDPCLLLSESETSCPAPPPLYRRESSITLDEKTSARTPISESGKQSPCNGV
VPPCTPTQGQPFSTPPSRRTLPMAPPVPFQTMHSVFKVNAPLLPTGDFKSDIIPYSDSNS
LCYVTTSTQTPPEFAPSEDEHLQSVNQSECLAGSGGQIFLSPGQSGGTMGRSDQSYYRGS
VRGIARGGKGLAHSYFRSSGGHRGGGFIPQAHLYGARDTGYQHSYRRGGGNAGQRHNNSG
WSDSSQVSSPDREGNYSLVDSAHGDSLHGVGMDLTPHAPHTLMHVPMYPLPQHPQPLRVA
FTAARTANYTPGTLDQPIAFDQLHSNLGEMFNTNVGRFTCPANGTYVFLFHILKLAVNVP
LYVNLMRNDEVMVSAYANDGAPDHETASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTF
SGFLLYQD
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccaaacaaaatgtaaaaaatctacgcaactttaagcatgagatgaatcccatc
ggcgacacaaaatgcgcacacattcgtgagaatctgaacatggtgcagctttctccatcc
ccagcccgggatgtctctccttcacctgagtcccccgagaaggggaggccggggagcctg
aaggcaggtagccccaagattggctcccctggtgggctgagttctctccagctggccctg
gcagcctccaccaccatttaccagggctacgagagttacatcgaggacggcctcatctgc
ctcaagcacaagatccgcaacctggagaaaaagaagattaaattggaagactacaggaag
cgtttgaaacatggggattcactcaatcaagaccagatagatgcagtggagaagtatgat
gaagtgatccacaacctgcagtttgcccaggagctgcacaagacccttggtggcctaaca
caggaactgctaaaggcccagaagaaggcgttgaagaaggagcagatggccaagcaggag
gtagagaggaggaggctgtgcatagtgctgcaggttaagttcctcttgcagaccctgctg
cagcacgagcacatcaggaaggacctcctctctgcccgcaacctccaggttgcagagcta
cagagcctgcttgagctcgctgaactactgggcgtgaagagggacaacaatgtgagtttg
gaggatcagatggagagagcagccctggtctacctggacctgctggaggggaataataaa
gcagtagccggaaccacctacaaggtcctgaaggctaagttggcgaagctgatggattgt
gggtactttgattgtgtaccgccgcctccgagcaagagtcccaaggaagtagaggatccg
atgaccaagaagacggtgtctcagacagccagcctctctaccctaatgatgtcaaacaaa
aaagatgtgcctagcagagagtttcttaacagacactacctgcctgacacagaccccaat
gggtgtcgagacactcccattactccgaactggaaggctgagttccaggctatgaaggaa
caggagccaccggactcgtgggatatggagtccgactccactcagcctgtaatccagaaa
ccatggagaggggcggctgtgttaatctccaaagttccagttacctccaagaaacaaaat
gccgaacccaaacagagaagagcgaagtctaaaagggagcgggacgccacagctgcactt
cgtgtggacacccctgtggaggtgttcaactcccagtcttccttgcccaaggaccccatc
ctgcgcaaacagcagctggaggacctgatgaccaagatcagaggctccttcagcttcatg
caggactctcttctggatggagaaggatcacccactaacggccatcctagactgggccgg
cgtgcctctggatcccaatctccactcgcacagagagattcaaggagaagcccggtggac
cttctccccaaaacactacattccactccattgccttctaaactcctccctgttgatgac
aaacccagtctgaccaatggagatgggggttgtctagagagctgtgacctggacctaact
acagaggacctggctcacgtcataaccattgatccatgtctgctgctgtctgagagtgag
acttcctgccccgctcctcctcccctctaccgtagggagtcctccatcaccctggatgag
aagacctctgctcggactcccatctctgaatccggtaagcaatccccctgtaacggggtg
gtgcctccttgtacccccacccaagggcagcccttttcaacccctcccagcagacgtaca
ctccccatggccccccctgttcccttccagaccatgcattcggtattcaaggtgaacgcc
cccttacttccgactggagactttaaatccgatattatcccctattcggactccaacagc
ctgtgctatgtcaccaccagcacccagaccccaccggagtttgctccgtcggaggacgaa
cacctacagtcggtgaaccagtctgaatgtctggcgggtagtggtgggcagatcttcctg
tcccctggccaatcaggtggcaccatgggccgttctgaccaatcatactacagaggatct
gttagaggtattgcacgtggtggcaaggggctggcacactcctactttcgctcttctggt
gggcacagaggaggaggcttcatcccccaggctcacctgtatggagctcgggacactggc
taccaacacagctacaggcgcggtggaggcaatgcaggacaaaggcacaataatagtggt
tggagtgactcctcccaggtgagcagcccagacagggagggcaactactccctggtggac
tctgcccacggcgactcgctgcatggtgttggcatggacctcacccctcatgccccccac
accctgatgcacgtacccatgtacccgctcccccagcatccccagccccttcgcgtggcc
ttcacagcagcccgcacagccaactacaccccgggcaccctggaccagcccatcgccttt
gaccagctgcacagcaacctgggggaaatgttcaacaccaacgtgggtcgtttcacctgc
ccagccaacggcacctacgtcttcctcttccacatcctcaagctggcggtcaacgtgccg
ctctacgtcaacctgatgcgcaacgacgaggtgatggtgtctgcgtacgccaacgacggg
gctccggaccacgagacggccagcaaccactccatcctgcagctgtaccagggagaccag
gtgtggctgcggctgcaccgcggctccatctatggcagcagctggaagtacagcacattc
tctggcttcctgctctaccaggactga
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