Salmo trutta (river trout): 115198840
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Entry
115198840 CDS
T08542
Symbol
rbm17
Name
(RefSeq) splicing factor 45
KO
K12840
splicing factor 45
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115198840 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115198840 (rbm17)
Spliceosome [BR:
stru03041
]
Complex A
U2 snRNP components
U2 related factors
115198840 (rbm17)
Complex B
115198840 (rbm17)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
115198840
NCBI-ProteinID:
XP_029617031
Ensembl:
ENSSTUG00000015925
UniProt:
A0A673YRS4
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Position
8:37858304..37866281
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AA seq
430 aa
AA seq
DB search
MSLYDDMGVGSATSDTKTEGWSKNFKLLQSQLKVKKAALTQAKSQRMKQGTVLAPVIDLK
RGGSADDRQIIDTPPHIAAGLKDTGPSGFSSGDALIPLADEYDPMFPNDYEKVVKRHREE
RQRQREQERLKEIEEREKKRKDRHEGSSAPSGFSRFPAAEGESDEEEEDYEKEKRKRSMG
GAAIAPPSSLVDSRDSSSYSYEDDMRPSRGSKAAIPPPMYEDSDRPRSPPGGPTNSFLAN
MGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDATEKTPGSSSQT
AAAEPLGWGSASIVDPSKKSEANPLTEILKCPTKVVLLRNMVGRGEVDEDLEGETKEECE
KYGKVIKCVIFEIAQVTDDEAVRIFLEFERVESAIKAVVDLNGRFFGGRVVKACFYNQDK
FRVLDLGEQM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttacgacgacatgggcgtcgggagtgcgaccagtgacaccaagaccgagggc
tggtccaagaattttaagctactgcagtcacagctgaaagtaaagaaggcagctctgact
caggctaagagtcagcggatgaagcagggtactgtcctggctccagtcatcgacttaaag
agaggaggttccgctgatgacagacagataatagacacacccccacacattgcagcagga
ctcaaggacacaggacccagcgggttctcctcgggggacgctctaatccccctggctgat
gagtatgaccccatgttccccaacgactacgagaaggtggtgaagagacaccgcgaggag
aggcaaaggcagagggagcaggaacgactgaaggagatagaggaaagagagaagaagagg
aaggaccgacacgagggcagcagcgctccgagtggattctcccgcttccccgcggcagag
ggagagtcagatgaggaggaggaggactatgagaaggagaagaggaaaaggagtatgggt
ggagcagccatcgccccaccctcatcgctcgtggatagtagagacagctcgtcatactcc
tatgaggatgacatgcgaccctcccgtggttctaaagcagccatccctccccccatgtac
gaggactccgaccgcccccgctcgccacctggcggtcccaccaactcattcctggccaac
atgggagggaccgtggcccataagatcatgcagaagtatggcttccgggagggccagggt
ctgggcaaacacgagcagggtctcagcacagccctgtctgtagagaagaccagcaagagg
ggtggcaagatcatcataggagacgccactgagaagacaccaggatccagtagccagacg
gcagcagctgagcctttaggctggggctcggcttcaatagtggacccctccaagaagtca
gaggccaaccccctcacagagatcctcaaatgccccaccaaagtcgtgctgctacggaac
atggtgggcagaggagaagtagatgaagatttggaaggggagaccaaagaagagtgtgag
aaatacggcaaggtcatcaaatgtgtcatctttgagattgcccaggtgacagatgatgaa
gctgtgaggatatttctggagtttgagagagtcgagtctgccatcaaagctgtggtggat
ctgaacgggaggttctttggtggtcgggtggtaaaagcctgcttctataaccaggataaa
ttcagagtgttggacctgggagagcagatgtga
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