Salmo trutta (river trout): 115198907
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Entry
115198907 CDS
T08542
Name
(RefSeq) RNA polymerase II-associated protein 3-like isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115198907
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115198907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_19
TPR_16
TPR_12
TPR_9
TPR_17
ARM_TT21_4th
ANAPC3
TPR_10
DUF3730
Motif
Other DBs
NCBI-GeneID:
115198907
NCBI-ProteinID:
XP_029617168
Ensembl:
ENSSTUG00000017642
LinkDB
All DBs
Position
8:complement(39861282..39870077)
Genome browser
AA seq
672 aa
AA seq
DB search
MAPNTNRKRQNGMSENKAIELQLQMRQNAEDLHSFMKDLDSWETDIKKKDEQLRSGSVGE
SQKSLPPVRNKDYKKKREKKKASDNNAKIETKQVPRINSYDYQSWDKFDVDKVLESMDKE
DSAAESNDSESEDSGVPATDQDKALAEKEKGNQLFKEGKYDDAIECYTRGMGADPYNPIL
PTNRAACFFRLKKFAVAESDCNLSIALDSNYFKAFARRGAARFALQNYESALEDYVMVLK
LDPENLEAQNEVMKCKEVIAKLGGKAESPEAAVVTPPVVDVKQQQLMEEQQRRQEAVVQK
DRGNAYFKEGKYEAAVEYYTKGMEADSTNVLLPANRAMAYLKLQRYKEAEEDCSKAIALD
GTYSKAFARRGTARAALGLLKQAKEDFEEVLKLEPGNKQAFHEMKKIAIDLGTSGLLATE
EHAQRRTILPVNKPPHLQSTKPLRRVDIEEVGGKILVQKEPSAVFTSTTAPCVRPQKTTS
IADTVREASPPSTSPSAKILKIEEISNIPSHSPVKGPEGDAVRAQTQKHREATVSKPTEP
PATPSTEVVPPAPTNSFQLEADLRKIGNGPEVIYKYLKQIQPQAYAKIFQSSLEPDMLNQ
ILKTLQSFYIKNEEPPVILEILRNLASVRRFDMAVMFMSIPEKKVLQELFDFLRQAGLED
ASVGALQKKYGV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaacacaaacagaaaacgacagaatggcatgtctgaaaacaaagccattgaa
ctccaactgcaaatgcgacaaaatgcagaggacctgcatagcttcatgaaagatcttgac
agctgggaaactgacataaagaagaaggatgagcaactaagaagtgggagtgttggcgag
tctcaaaaaagcctcccaccagtgcgaaacaaggactacaaaaagaagagggagaaaaag
aaggcatcagacaacaatgcaaagattgaaacaaaacaagtacccaggataaattcttat
gactatcagtcatgggacaaatttgatgtggacaaggttttggagtccatggataaagag
gacagcgctgctgagtccaatgactctgaatctgaggattctggggttcctgctactgac
caagacaaagctcttgctgagaaggagaaaggtaatcagctgtttaaagaagggaagtat
gatgacgccattgagtgttacaccagaggcatgggtgcagacccttataaccccattctg
cctacaaaccgagctgcctgcttcttcagactcaaaaagtttgctgttgccgagtctgac
tgcaacttgtccatcgctttggacagtaactacttcaaagcatttgcacgaagaggagca
gctcgattcgccctgcaaaattatgaatctgccctagaagattatgtaatggtgctcaag
ctggatcctgagaacctggaggcacagaatgaagtgatgaaatgcaaagaggtcattgct
aaactgggtggaaaggcagaaagcccagaggctgcagtggtgaccccacctgtggtggac
gtcaagcaacagcagctcatggaggaacagcagaggagacaggaggcggtggtgcagaaa
gacagggggaacgcatacttcaaagaggggaagtatgaggctgcagtagaatactacacc
aagggcatggaagcagacagcaccaatgtcctcctgcctgccaaccgggccatggcttac
ttaaagctgcagagatataaagaggctgaagaggactgcagtaaagccatagccctggat
ggcacctactcaaaggcctttgcccgcagagggacagctagggctgctctgggactgcta
aaacaagctaaagaagattttgaggaggtcctgaagctagaaccaggaaacaagcaggca
tttcatgagatgaagaagattgcaattgacttgggcaccagtggtctgctggcaacagag
gagcatgcacagcggagaacaatactgccagttaacaaaccacctcacctgcagtcaacc
aaaccattgaggagagtggacattgaggaggttggtggaaagatccttgtccagaaggag
ccctcagctgttttcacttcaaccacagccccctgtgttaggccccagaagaccacctcc
atcgcagacaccgtgagagaggcctcacctccctctacctcccccagcgctaagatcctg
aagatagaagaaatatcaaacatcccctcacattcccctgtcaaagggcctgagggggat
gctgtgagagcacagacacagaagcacagggaggcaaccgtcagtaaaccaacagaaccg
cctgctacaccctcaactgaggtcgtacctcctgcccccaccaacagcttccagctagag
gcagacctaaggaagattggaaatggccctgaagttatctacaagtatttgaagcaaatc
cagcctcaggcatacgcaaagatcttccagagctctcttgagccagacatgctcaatcag
attctaaagacgttacaaagcttctacatcaagaatgaagagccacctgtcatactggag
atcctcaggaatctggccagtgtgaggcggttcgacatggctgtcatgttcatgtccatc
cctgagaagaaagttctacaagaattgtttgactttcttcgtcaagcaggacttgaggac
gcttcagtaggagcactgcaaaagaagtatggagtgtga
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