Salmo trutta (river trout): 115198931
Help
Entry
115198931 CDS
T08542
Name
(RefSeq) myosin-binding protein C, slow-type-like isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
stru
Salmo trutta (river trout)
Pathway
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115198931
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115198931
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115198931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
THB
Ig_DSCAM-DSCAML_C
BiPBP_C
Ig_CYK3_C
PHD_4
Motif
Other DBs
NCBI-GeneID:
115198931
NCBI-ProteinID:
XP_029617208
Ensembl:
ENSSTUG00000018454
LinkDB
All DBs
Position
8:40360472..40393499
Genome browser
AA seq
1448 aa
AA seq
DB search
MPEPTKKDETPNGEKESVATDSSEAPMPTPEISLEVSPPPPEQPVETEGKDPQPIEVIKP
EPVENGSKEPEPEAVAVGAKEQVESVNSEVKEEAPSPCSPPPPATVKEEAEPVVTEVTQP
PEPVVTVVTPPPPPPPEPVVMEVTQPPEPVLTVVTPPPPPPPEPVVTEVTQPPEPVVTVV
TPPPPPEPVVTEVTPPPPPEPVVTEVTQPPEPVVTVVTPPPPPEPVVMGVTPPPPPPPEP
VVMGVTQPPEPVVTMVTPPPPPPPEPVVTVQVTPPPPPADKDDDATTNTPSPPPPPEDAN
TAKKLSIELPNDSIHVSAMGRKDSVWSLGDGQAPEDLDKPVDTPPLSSLLIERPQGGSIT
VGGDISFVAKVEAQDLLRKPTIKWFKGKWMDLASKTGKHLQLKETFDRRTKIHTFEMHII
KAKDNYAGNYRCEVTYKDKFDSCSFDLEVKELEQSQSVDIRSAFKRSSEGHEDAGDLDFS
GLLKHRNQREPKQDETPEVDVWEILKSARPDQYEKIAFEYGITDLRGLLKRLKKTKKEEK
KSEAFAKKLDPAYQVDKGGKIRLVVDLADPTVELKWYKNGQEIRPTPNQRKFIFEQKGTQ
RILVINNCGLNDDAAYSVAAGEEKCTTELFVKELPVKITKEIEAVKTTVNERIELECEVS
EEGAQVKWCKNGVEVPTGPRSRYRVKSDGLKHWLIIDDASKEDTGTFSLMASGGTSEAKV
QVELKPLKIIQDLQDMTVLLGQPLKMHCEIFPGNVPGRWYRNGQLIQSNDRINILQRAKN
HRLEIVNSTIHDAGDYTFVPEGYTQSLCAKVHIVDPPRVHLESLNFPDNTVTIVAGNKLR
VEIPISGEPAPRVVWMKGERVILDSGHRVRAETFPDHTSLTIDIAEKDDTGNYKIVLQNE
AGEAGASIKVKVVDIPDPPEVPLVTEVGGDWCSMTWEPPIYDGGSPILGYFIERKKKQSS
RWMRLNFDLNKETTFEPKKMIEGVPYEVRVFAVNAIGVSKPSEPSKAFVPLAVTSEPTML
VVDDVTDTTVTMKWRPPDTIGAAGLDGYLVEYCIEGTDDWRVTNKELTEKTKYTITGLPP
EAKILVRVRAINAAGASTPRTLQHSILVKEVIEPPKIRIPRHLKQTYTRKVGEAVNLVIP
FMGKPRPKVSWLKEGQTVDPTQVTIRNTDCDSIIFIRKAERKHSGKYDMKVEVENHVDTA
IIDIQIVDLPGPPQCVKIDEVWGGNVALDWTPPKDNGNAAITGYTIQKADKKTMEWYTCI
EHYHRTCITITELVVGNEYYFRIYSENMVGLSEGATQTKDSALIVKEGMQLKNPEYIDHD
FKEPPKFTQPLINTFAIAGYNATLNCSVRANPRPKVIWMKNKIAIIDDPRYRMFSNQGVC
TLEIRKPSPYDGGMYSCKAINDLGDALVECKLEVKGGFTFSELMQRGVPLHLIDKYMSET
KAVEQPEK
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcccacaaaaaaagatgagacgcccaatggtgaaaaagagagtgttgccaca
gacagtagtgaggcgccaatgcccacacctgagatatccctcgaggtctcacctccaccc
ccagaacaaccggtagagactgaggggaaggatccacagcccatagaggtgattaagcca
gaaccagtagagaatgggtctaaagaaccagaaccagaggcggttgcggtcggggctaaa
gagcaagtcgagtctgtgaactctgaagtaaaggaggaggccccgtccccttgctcaccc
ccaccgcctgcaaccgtgaaggaggaagcagagccagttgttacggaggttacccaaccg
ccagagcctgttgttacagtggttaccccaccaccacctccacctccagaaccagttgtt
atggaggttacccaaccgccagagcctgttcttacagtggttaccccaccaccaccacca
cctccagaaccagttgttacggaggttacccaaccgcccgagcctgttgttacagtggtt
acaccacctccacctccagaaccagttgttacggaggttaccccaccaccacctccagaa
ccagttgttacggaggttacccaaccgcccgagcctgttgttacagtggttaccccacca
ccacctccagaaccagttgttatgggggttaccccaccaccaccaccacctccagaacca
gttgttatgggggttacccaaccgccagagcctgttgttacaatggttaccccaccacca
cctccacctccagaaccagttgttacggtgcaggttaccccacccccacctccagcagat
aaagatgatgacgctacaaccaacaccccatcaccaccgcccccaccagaggatgccaat
acagccaagaaactgtctattgagctgcctaatgatagcatccatgtgtcagccatgggg
agaaaagactcagtgtggtctctcggagatggacaggctccagaggaccttgacaagccc
gtagacactccaccgctgtccagcctgctcatagaaagaccccagggtggatccatcact
gtgggtggagacatctcctttgttgccaaagtggaggcccaagacctgctccgtaaaccc
accatcaagtggttcaaagggaaatggatggacctggccagcaagaccggaaagcactta
caactgaaagaaacctttgaccgacgcaccaagattcacacatttgagatgcatatcatc
aaggccaaagacaactatgctggaaactacaggtgtgaggtcacctacaaggacaaattt
gacagctgttcttttgacctggaagtgaaagaactggaacagtcacagagtgttgatatt
cgatcagccttcaaaagaagcagtgaaggacacgaggatgcaggggatcttgactttagt
ggtcttcttaaacatagaaaccaaagggagcccaagcaggatgagacccccgaagtggac
gtgtgggagatcctgaagtcggccaggccagaccagtacgagaagatcgcctttgagtac
ggcataacagacctgcggggtctgctcaagaggctgaagaagaccaagaaagaggagaag
aagagtgaagcttttgccaagaagttggatccagcataccaggtggacaaaggagggaag
atccgtttagtggtggatcttgcagaccccacagtagagctgaaatggtacaagaacggc
caggagatccgtccaactccaaatcaaaggaagtttatctttgagcaaaagggcacacag
cggatcctggtcatcaacaactgcggcctgaatgatgatgctgcttattctgtagccgcg
ggagaagagaagtgtaccacagagctgtttgtcaaagagttaccagtgaagattactaaa
gagattgaggcggtgaaaacgacagtgaacgagaggattgagttggagtgtgaagtgtcg
gaagaaggagctcaagtaaaatggtgtaagaatggcgtggaggtaccgacggggccccgg
tcacgctaccgtgtcaagtctgacgggctgaaacactggctaatcattgacgatgcctca
aaggaggacactggaaccttctcccttatggcctctgggggcacctctgaagccaaagtc
caggttgaattgaagccactgaagattattcaggatttgcaggacatgacagtgcttttg
ggccagccactgaagatgcactgtgagatcttccctgggaatgttccaggtcgctggtac
aggaacggacagttgattcagtccaacgaccgcatcaacatcctgcaaagagccaagaac
caccgattagaaattgtgaacagcaccattcacgatgccggggattatacctttgtgcca
gagggatacactcagagcctctgtgccaaagttcatatcgttgatcctcccagggtgcac
ctggagagcttgaacttccctgacaacacggtgaccattgtggcaggaaataaacttcgt
gtggagatccccatcagtggagaaccagcacccagagtggtgtggatgaagggagagagg
gtaatccttgactcgggccaccgtgtgcgagctgaaacctttccggaccacaccagcctc
accatcgacatcgcagagaaggacgacacaggaaactacaagatagtcctgcagaatgag
gctggggaagcaggggctagcatcaaagtcaaggtggtggatatcccagaccctcctgaa
gttcccctagtcacggaggtgggaggagactggtgctctatgacatgggaacccccgatc
tatgacggaggctcacccatcttaggctacttcatcgaaaggaagaagaagcagagttcc
agatggatgaggctgaactttgacctgaacaaagagaccacatttgagcctaaaaagatg
attgagggtgtcccatacgaggtccgcgtctttgctgtgaatgccatcggcgtgtccaaa
cccagcgagccgtccaaagcctttgtgcccctggctgtgaccagcgagcccaccatgctg
gtggtggatgatgtcacagacaccacggtgaccatgaagtggcgtcccccagacaccatc
ggagctgcaggcttagacggctacctggtggagtattgcatcgaaggaactgatgactgg
agagtaaccaataaggagctgacagagaagacaaagtacaccatcactggcctccctcca
gaggctaagatcctggtaagggtaagggccatcaatgctgcaggcgccagcactcccaga
acacttcagcactctatcctggtcaaagaggtcatcgaaccacctaagatccgcatcccc
cgtcacttaaagcagacgtacactcgtaaagtcggagaagccgtcaatctcgttattcca
ttcatgggcaagcccaggccaaaggtgagctggctgaaggagggtcagacggtggacccc
acgcaggtcactatccgcaacacagactgtgacagcatcatcttcatccgcaaagcagag
aggaagcactctgggaagtacgatatgaaggtggaggtggagaaccacgtggacacggcc
atcatagacatccagatagtagacctcccagggcctccacagtgtgtgaagatagatgag
gtctgggggggaaacgtggctctggactggacccctccaaaggacaatggcaacgccgcc
attacaggctacaccatccagaaagcagacaagaagaccatggagtggtacacgtgtatt
gagcactaccatcgcacctgcatcactatcaccgagctggtggtggggaacgagtactac
ttcagaatctactctgagaacatggtgggtctgagcgagggtgccacccagaccaaggac
agcgcactcattgttaaagaaggcatgcaactgaaaaacccagagtacatcgaccacgac
ttcaaagagcctcccaagtttacccagcccctcatcaacaccttcgccatcgctggctac
aatgccaccctcaactgcagcgtccgcgcaaacccacggcccaaagtgatttggatgaag
aataagatagccatcattgacgacccgcgctaccgcatgtttagcaaccaaggggtctgc
accctggagatccggaaacccagcccctacgacgggggcatgtactcctgcaaggccatt
aatgacctgggtgatgcactagtggagtgtaagctggaggttaaagggggctttaccttc
tctgagctcatgcagcgtggagtgcctttacacctgatcgataagtacatgagcgagacc
aaggccgtggagcagccagagaagtag
DBGET
integrated database retrieval system
