Salmo trutta (river trout): 115199049
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Entry
115199049 CDS
T08542
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115199049
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
90S particles
Other 90S particles
115199049
Pre-60S particles
Other pre-60S particles
115199049
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
DSE1_N
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_RFWD3
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WD_LRWD1
ASA1
Beta-prop_TEP1_C
Beta-prop_WDR41
PAC11
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_NOL10_N
ANAPC4_WD40
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
TRM82_WD
Beta-prop_ACSF4
Beta-prop_DCAF12
Beta-prop_MIP2
Motif
Other DBs
NCBI-GeneID:
115199049
NCBI-ProteinID:
XP_029617424
LinkDB
All DBs
Position
8:complement(43866966..43875033)
Genome browser
AA seq
494 aa
AA seq
DB search
MSSQITCVGWVKRGVSKETPDKVELSKEELQHIIAEAKEQLSERVGEEEDEEDEGMASGQ
EQSDEAEAVQGQEPEQDENEAGREEADELAKYGLDRYDEEDSVTANLGDSLAGLTVFSTN
EEDPYITIKDTDQYEREDFQIKPNDNLIISGRAEKDCCNLEIHVYNTEEESLYVHHDILL
PAYPLCVEWLNFDPSPEGTGNYVAVGNMTPQIDVWDLDVVDCLEPAFTLGSKKASKKKKK
SKKAAAEPVEGHTDAVLDLSWNKLVRNVLASGSADKTVILWDLAQGKPATTLRRHTDKVQ
TLMFHPFEAQTLISGSYDKSAILYDCRSPDSSHRTWRFSGQVERVAWNHFSPCNFLASTE
DGFIYCLDARSDKPVFTLRAHDGEVSGLDLSSQIRGCLVTSSADKHVKIWDILGNKPNLV
HTRDMKMGVLFCAACCPDMPFVYAFGGQRDGLRVWDISDVAAVAEVFGNRERLVATTAPE
ASSSTSSTADMELS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaaatcacttgtgttggatgggtgaagcgtggcgtttcgaaggaaacacca
gataaggtggagttgagcaaagaagaattgcaacacattatagcagaggcaaaagaacaa
ttgagtgaacgcgtaggtgaagaggaggatgaggaggatgaaggcatggccagcgggcag
gaacagagtgacgaggcagaagctgttcagggacaggagccagagcaagatgaaaatgaa
gcaggaagggaggaagctgatgaactagcaaagtatggtttggatagatatgatgaggaa
gactcggtgactgccaaccttggtgacagccttgccggcctcacagtgttcagcaccaat
gaggaggatccttacattaccatcaaagacacagaccagtatgagcgagaggactttcaa
atcaagcccaatgataacctcatcatttcaggcagagcagagaaggactgctgcaacctg
gagattcacgtatacaacaccgaggaggaatccctatatgttcaccatgacatactcctg
ccagcctatccattgtgtgtggagtggcttaactttgaccctagtccagaaggcacaggc
aattatgtggctgtaggcaacatgacaccgcagatcgacgtgtgggacctggatgtggtg
gactgcctagagcctgccttcaccctggggagcaagaaggcctccaagaagaaaaagaaa
agcaaaaaggctgcagcagagccagtggaaggtcatacagacgctgtactggacttatcc
tggaacaaactggtccgcaacgtcttggccagtgggtcagccgacaaaaccgtgatcctg
tgggatctggcacagggtaagccggcaacaacactgcgcagacacactgacaaggttcag
acgttgatgttccacccctttgaagctcagaccctgatatcaggatcatacgataagtcg
gcaatcctgtatgactgccgcagcccggacagcagccatcgcacttggaggtttagcggg
caggtggaaagggtcgcctggaaccacttctcgccctgcaacttcctggcgagcacagag
gacggctttatttactgtctggacgcacgctcggacaagccagtgtttacgctaagggca
catgacggagaggtgtcaggcttggaccttagcagccagatccggggatgcttggtcacc
tcctcagcagacaaacacgtcaagatttgggacatcttggggaacaagcccaatctagtt
cacacccgggacatgaaaatgggggtgctgttctgtgcagcgtgctgtcctgacatgccc
tttgtatatgcctttgggggacagagggatggcctgcgggtttgggacataagtgatgtg
gcagcagtcgctgaggtgtttggcaatcgggagcggttggtggcaaccacagcgcctgag
gcatccagcagcacttcctccacagcagatatggagctttcctag
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