Salmo trutta (river trout): 115199403
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Entry
115199403 CDS
T08542
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K20995
Notch 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru04330
Notch signaling pathway
stru04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115199403
04371 Apelin signaling pathway
115199403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NODP
NOD
EGF_3
Ank_3
Ank_4
Ank_5
EGF_DL_JAG
EGF_Teneurin
Plasmod_Pvs28
cEGF
Motif
Other DBs
NCBI-GeneID:
115199403
NCBI-ProteinID:
XP_029617752
Ensembl:
ENSSTUG00000015211
UniProt:
A0A673Z6G9
LinkDB
All DBs
Position
1:52303612..52353190
Genome browser
AA seq
2474 aa
AA seq
DB search
MGGNYKVWIFLPILFLVHNCEGFRCVDKYRPCDNGGTCIDSPSQCICRPGYIGPLCQSLD
PCHRSPCLNGAACKSQVANGMPQFTCVCQRGFRGQDCSLIDACATSPCANGARCASWNNH
YNCSCPPGFQGKNCRNDIDECRKSGVCLNAGLCMNTHGSFRCQCPPGYSGRTCEVSSLPC
APSQCINGGTCRPTGDHTYDCACLPGFEGHNCETNVDDCPGHRCMNGGLCVDGVNTYNCQ
CPPEWTGQYCAEDVNECLMQPNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENIDDCATA
VCFNGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPA
GFVGGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYAGPRCEIDINECLSMPCQ
NDATCLDRIGEFTCICMPGYMGTYCEVDVDECESNPCVNDGICRDMVNGFTCTCQPGFTG
TMCQIDIDECASTPCQNGAKCYDRPNGYECRCAEGYEGTLCESNTNNCQPDPCHHGTCLD
GIASYTCNCEAGYTGYRCENQLNECHSNPCQNGGKCVDLVNKYICQCQHGTSGTNCEINF
DDCASKPCDYGICKDGINRYDCVCKPGFTGPLCNVEMDECSSGPCRNGGTCVDEENGFHC
QCPEGFQPPYCYSQVDECGSNPCVHGACRDDINGYRCDCEPGWVGKNCDLDRNDCLPSPC
QNAGTCIDQLNGFTCKCRHGFRGNLCQVNINECSSSPCLNQGTCVDGVASFTCLCELPYS
GPTCADVLTPCSPNPCANHALCSNTPDYLGYQCNCQQGWQGQLCNIDVNECIANPCKNRG
TCTNTLGGFVCSCRGGFTGPNCETDINDCAPNPCLSGGSCTDGVNSFRCSCLPGFTGPRC
AVEVNECQSAPCKNGGTCTDYVNSYTCTCRPGFTGINCETNIPDCTESSCFNGGTCTDKI
NGYSCTCRSGFTGSHCQYEVNECDSQPCLNGGVCQDALESFRCSCPKGYTGNRCQMSVDW
CRRSSPCQNGGRCRQKDASFSCECLGGWSGRYCDIPGVSCEVAALKRGLQTDELCHHGGH
CVNTGNTHYCKCPTDYTDSYCESQVDHCEDKHCRNGATCRGYVGGYQCDCMPGYTGENCE
MEVNECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCALPLRLRGTPPKCLNN
GTCVDRVGGYRCNCPPGFTGERCEGDINECHSNPCSPANSLDCIQLPNDYQCVCKPGFTG
RRCQSRFSVCESQPCQNGGACSVSSSSALGYACTCQLGYAGNNCERSMSCRELSCYNGGS
CALTTRGARCTCLTGYAGPQCQHRSNEGCSSQPCRNGGLCTEETSFPFFLCQCAQGWTGK
RCEQGSTRLIEVPLPPSCPLADCHGKANDGVCDKECNTFPCRWDGGDCSLAVNPWARCTD
PRCWRVFNNSQCDESCKNADCLYDNFDCKSKEKICNPIYEAYCIDHYADGRCDQGCNSEE
CGWDGLDCAGKVPENLADGVLVLVVLLPPDELVNTAPAFLQKLSAILRTTLRFRLDHNGE
PMIRPYTRREARLKRELQPHQEVIGSIVYLEIDNRLCSQRSDDCFPSADSAADYLGALSA
VEMLRFPYPIKEVRGEKIQDPEDMPEWAKLMLAGVAALFLLVILVVGVLIGRRKREHSTL
WFPEGFFPKKEPSSNKNRREPLGQDALGMKYMPKTVEESLLGDHSDSWIDTDCPEAKRLK
VEEPSLLSDSEDTVDCRQWTQHHLAAADIRMPPSMALTPPQGEFDQDCMDVNVRGPDGFT
PLMLASFCGGGLEPELPEEEESEECSANIISDLIYQGATLVAQTDRTGETALHLAARYAR
ADAAKRLLDAGADANAQDNTGRTPLHAAVAADAQGVFQILIRTRATDLDSRMYDGSTALI
LAARLAVEGMVEELITCHADINAVDELGKSALHWAAAVNNVEATMALLKNGANKDMQDLK
EETPLFLAAREGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVR
SPQVHGGAPHHLAGGHTLSPLMCPPSAFMPGLKNTPQGKKSRRPGAKGSGLGGQHAQNLK
DSAKARNKKLTLDMQSALLESSVTLSPVDSLDSPRGGANNAGYITNPCSPVAMPSSGLFH
SSMSVPSTPMVHSSMMDGSGPFTVSLAQLNDLGDGGMSMQGRVSMASQVNQGPHGYVLNA
GQLGLNMGLVSPVSVPFDWHSRMPSSSQCGGQVVNLVHSSQAGMHPQSPMQQQQNSLMMQ
QHQQHQQNLYRSAQQAMLQPTPVIASTPISHSPVKLPSIAEQQQQLHNHSMASQQSLRMG
TSSPPTPQTTQPPPAFFQQQPPQPQPAPQPTSPQASQAPPPQASGSTAGLEDYPTPPSQH
SYSALDATPKHYLRLSSEHPYLTPSPESPEPWSSPSPHCVSDWSDSTPSPAVAGPAQTQI
PHVQESNGKMQVFA
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atgggggggaattataaagtttggatatttttaccaattttattcttggtccataattgc
gaaggattccgctgcgtggataaatacagaccttgtgacaatggaggaacgtgcatagac
tcaccctcgcaatgcatatgtcggccggggtacatcgggcctctgtgccaaagcctggac
ccctgtcaccggtcgccatgcctcaacggagccgcctgcaagagccaggtggccaacgga
atgccacagttcacctgtgtgtgccagagagggttcagaggtcaagactgctccctcata
gacgcctgtgccaccagcccctgtgccaatggcgcccgctgtgccagttggaataaccac
tataactgttcctgcccgcctgggttccagggaaagaactgccgcaacgatatcgacgag
tgccgcaagtctggcgtctgtctcaacgcaggcctctgcatgaacacccatggttccttc
cgctgccagtgcccacctgggtacagcgggcgcacctgcgaggtgtcctccctgccctgc
gccccctcccagtgcatcaacgggggcacctgccgcccgaccggagatcacacctatgac
tgtgcttgcctaccagggttcgagggacacaactgtgagacgaacgtggacgactgccca
gggcataggtgtatgaatgggggcctgtgtgtggatggagtcaacacctataattgccag
tgcccacctgagtggacaggtcagtactgtgcagaggatgtcaatgagtgccttatgcag
cccaacgcctgccataacggaggcacctgcttcaacaccatcggggggcacacctgcgtg
tgcgtcaacggctggacgggagacgactgcagcgagaacatcgacgactgtgccaccgcc
gtgtgcttcaacggcgccacctgccacgaccgcgtggcttccttcttctgcgaatgcccc
gtggggaaaaccggtctgctgtgtcacctggacgacgcgtgcgtcagcaacccatgtaac
gagggcgccgtgtgtgacaccaaccccctgaacgggcgcgccatctgcacctgtcccgcc
ggcttcgtgggcggagcctgcaaccaggacatggacgagtgttccattggtgccaacccc
tgtgaacactttgggaagtgtgtgaacacggaggggtccttccagtgccagtgtggtcga
ggctatgccggcccccgctgtgagatcgacatcaacgagtgtctgtccatgccctgccag
aacgatgccacctgtctggaccgcatcggagagttcacctgcatctgcatgccaggctac
atggggacctactgtgaggtggatgtggatgagtgtgagagcaacccttgtgtgaacgac
ggaatctgccgcgacatggtcaacggcttcacatgcacctgccagccagggtttactggc
accatgtgtcagatcgacattgatgagtgcgccagcacgccctgccagaacggagccaag
tgttacgaccgacccaacggatacgagtgccgctgtgctgaagggtacgagggcacactg
tgcgagagcaacaccaacaactgccagcccgacccctgccaccacggcacctgcctggac
ggcatcgccagctacacgtgtaactgcgaggccggctacacgggctaccgctgcgagaac
cagctgaacgagtgccacagtaacccctgccagaatgggggcaagtgtgtggacctggtc
aacaagtacatctgccagtgtcagcacggcacctcaggtaccaactgtgagattaacttt
gatgactgcgccagcaaaccatgtgactatggcatctgcaaggacggcatcaaccgctac
gactgcgtgtgcaaaccaggcttcaccggcccgctgtgcaacgtggagatggacgagtgc
tcgtccggcccctgcaggaacggggggacgtgtgtggacgaggagaacggcttccactgc
cagtgtcccgagggcttccagcctccctactgttactcccaggtggacgagtgtggcagc
aacccctgtgtgcacggcgcctgcagagacgacatcaacggctaccgctgtgactgtgag
cccggctgggtggggaagaactgtgacctagaccgtaatgactgtctgcccagcccctgt
cagaacgctggcacctgcatcgatcagctgaacggattcacctgcaagtgtcgccacggc
ttcagaggtaacctgtgccaggtaaacatcaacgagtgttcgtccagtccgtgtctgaac
cagggcacgtgtgtggacggcgtggccagtttcacctgtctgtgtgagctgccctacagc
ggtcccacctgtgccgacgtgctcaccccctgctcccccaacccctgtgccaaccatgcc
ctgtgcagcaacacacctgactacctgggctaccagtgcaactgccagcaaggatggcaa
ggtcagctgtgcaacattgacgtgaacgagtgcatcgccaacccgtgtaagaaccgtggt
acctgcaccaacacgctgggagggttcgtgtgctcctgccgcggcggcttcaccgggccc
aactgtgagacagacatcaacgactgtgcccctaacccgtgtctgagtgggggttcctgt
acggacggtgtgaactcgttccgctgcagctgtctgccaggcttcacggggcctcgctgt
gccgtggaggtgaacgagtgtcagagcgccccctgtaagaacggaggcacctgcacagac
tacgtcaacagctacacctgcacctgcagacctggcttcactggcattaactgtgagacc
aacatcccagactgcactgaaagctcatgcttcaacggaggtacctgtacagacaagatc
aacggctactcctgtacctgtcgctcaggcttcacaggctcccactgccagtatgaggtg
aatgagtgtgactcccagccctgcctcaacggaggggtctgccaggacgctctggagtcc
ttccgctgctcctgccccaagggatacacaggcaaccgctgccagatgtcagtggactgg
tgcagacgctcgtctccctgtcagaacggagggcgctgtcgtcagaaggacgcctccttc
tcctgtgagtgtctgggaggctggtctggacgctactgtgacatccctggggtttcctgt
gaggttgccgcgctcaagagaggcctccagacagacgagctgtgtcatcacggaggtcac
tgtgtcaacacaggcaacacccactactgtaagtgtcccacagactacacagacagctac
tgtgagagccaggtggaccactgtgaggacaaacactgtcgcaacggcgccacctgcagg
ggctacgtgggaggataccagtgtgactgtatgccgggctacaccggagagaactgtgag
atggaggtcaacgagtgccagtctcacccgtgtcagaacggtggcacctgcattgacctg
gtgggacactacatctgctcctgcccacctggtaccttgggtgttctgtgtgagatcaat
gaggatgactgtgctcttcctctgaggctgcgcgggactcctcctaagtgtctgaacaat
ggtacctgtgtggacagggtggggggctaccgctgcaactgtccccccggcttcactgga
gagaggtgtgagggggacatcaacgagtgtcactccaacccctgcagccccgccaacagt
ctggactgcatccagctccccaacgactaccagtgtgtctgcaagcccggcttcacaggt
cggcggtgccagagcaggttcagtgtgtgtgagtctcagccctgtcagaacggaggggcc
tgttctgtctccagcagctcagcccttggatacgcctgtacctgtcagctgggctatgct
gggaacaactgtgagaggagcatgtcatgtcgggagttatcttgctataatggaggtagt
tgtgctctgaccacgcggggcgcccgctgcacctgcctgacaggctacgccgggccccag
tgccagcaccgtagtaacgagggctgctcctcgcagccgtgccgcaacggaggcctctgc
accgaggagaccagcttccccttcttcctctgccagtgtgcccaaggctggacgggcaag
cgctgcgagcagggcagcaccaggctgatagaggtccctctgccgccctcctgccccctg
gccgactgccacggcaaggctaacgacggtgtctgcgacaaggagtgcaacacattcccc
tgccgctgggacgggggcgactgctcgctggcggtgaacccatgggcgcgctgcaccgac
ccgcgctgctggcgtgtcttcaacaacagccagtgtgacgagtcgtgcaagaacgccgac
tgcctctacgacaactttgactgcaagagcaaggagaaaatctgcaatcccatctacgag
gcgtactgcatcgaccactacgctgacggccgctgtgaccagggctgtaactcagaggag
tgtggctgggacggtctggactgtgcagggaaggttccagagaacctggctgacggagtg
ctggtcctggtggtcctgctacccccggacgaactcgtgaatacggcccctgccttcctg
cagaagctcagcgccatcctgagaaccaccctgcgcttccgcctggaccacaacggagag
cccatgatccgaccctacacccgccgagaggcgcgcctcaaacgagagctgcagccccac
caggaggtcattgggtccatagtgtacctggagatagacaaccgtctgtgttcccagcgg
tctgacgactgtttcccgtcggcagacagcgcagcagactacctgggagccctgtcagcc
gtggagatgctccgcttcccctaccccatcaaggaagtccgcggtgagaagatccaagac
cctgaggacatgccagagtgggccaagctgatgctggcgggcgtggcagccctgttccta
ttggtcatcctggtggtgggcgtgctgatcggccgcaggaagagagaacacagcaccctg
tggttccccgagggcttcttccccaagaaggaacccagcagcaacaagaaccgcagggaa
cccttaggccaggacgcactgggcatgaaatacatgcccaagacggtggaggagtctctg
cttggcgaccacagtgactcgtggatcgacacagactgccccgaggccaagagactgaag
gtggaggagcccagcctcctgtcagacagtgaagacactgtagactgtagacagtggacc
cagcaccacctagcggctgcagacatccgcatgcccccctccatggccctcaccccgccc
cagggagagttcgaccaggactgcatggacgtcaacgtccgaggacctgacggtttcacc
cctctgatgctggcgtcgttctgcggaggcggtctggagcccgagctccccgaggaggag
gagtcagaggagtgttccgccaacatcatctctgacctcatctaccagggcgccacattg
gtcgcccagacggaccgcaccggagagaccgcccttcacctggctgcccgctacgcccgc
gcagacgccgccaagcggctgttggacgccggggccgacgccaacgcgcaggacaacaca
gggcgcacgccgctacacgccgccgtggccgccgacgcccagggggtcttccagattctg
atccgaacccgggctacagacctggactctcgtatgtacgatggctccaccgccctgatc
ctggctgcccgcctggccgtagagggcatggtggaggaactcatcacctgccacgcagac
atcaacgctgtcgacgaactgggtaaatctgctctgcactgggcagctgctgtcaacaac
gtggaggccaccatggccctgctgaagaacggagccaacaaagacatgcaggacctcaag
gaggagacgcctctattcctggcggcgcgtgagggtagttgtgaggcggtcaaggtcctc
ctggcccatttcgccaacagggagataaccgaccatatggatcgtctgccaagggacatc
gcccaggagagaatgcaccatgacatcgttcagctgctggatgagtacaacacagtgagg
agcccccaggtccacggaggggccccacaccacctggccgggggacacaccctgtccccc
ctcatgtgcccccccagcgccttcatgcccggcctgaagaacaccccccaggggaagaag
agtcgccgccccggggccaagggttcaggtctgggagggcagcatgcccagaacctcaag
gattcagctaaggcccgcaacaagaagctgaccctggacatgcagagcgccctgctggag
agctctgtcaccctgtcccccgtcgactccctggactccccccgcggaggggccaacaac
gccggctacatcaccaacccctgctccccggtcgccatgccctcctcggggctcttccac
tcctccatgtcggtgcccagcactcccatggtgcacagcagcatgatggacggctctggc
cccttcactgtgtctctggcccagctcaacgacctgggagatggaggcatgtccatgcag
ggccgcgtgtccatggccagccaggtcaaccagggcccccacggctacgtgctcaacgcc
ggccagctggggctcaacatgggcctggtgagccctgtcagcgtgcccttcgactggcac
agccgcatgccctcctcctcccagtgcgggggacaggtggtgaacctggtccacagcagc
caggcgggcatgcaccctcagagccccatgcagcagcagcagaacagcctcatgatgcag
cagcaccagcagcaccagcagaacctgtaccgcagcgcccagcaggccatgctgcagccc
acgcctgtcatcgccagcacgcccatctcccacagccccgtcaagctgccctccatcgca
gagcagcagcagcagcttcacaaccactccatggccagccagcagagcctccgcatgggc
acctcctccccacccaccccccagacgacacagccccctccagccttctttcagcagcag
cctcctcagccccagccagctcctcagcccacctctccacaggcctcccaggcccctcct
ccccaggccagtggcagcactgcaggcttggaggactaccccaccccgccctcccagcac
agctactccgccctggatgccacccccaagcattacctccgcctgtccagcgagcatccc
tacctgaccccctccccagagtcgcccgagccctggtccagcccctccccccactgtgtg
tctgattggtcagactccacccccagcccggcggtggccggtcctgcccaaacccagatc
ccccatgtccaggagtccaacggcaagatgcaggtgtttgcatga
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integrated database retrieval system
