Salmo trutta (river trout): 115199661
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Entry
115199661 CDS
T08542
Name
(RefSeq) whirlin-like
KO
K21879
whirlin
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115199661
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
USH complex and associated proteins
115199661
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Motif
Pfam:
PDZ
PDZ_6
PDZ_2
LCL2_C
Motif
Other DBs
NCBI-GeneID:
115199661
NCBI-ProteinID:
XP_029617830
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Position
9:complement(35842686..35979746)
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AA seq
906 aa
AA seq
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MNPHEPQLPHDLSCFTSPEACPCPDSFSTTADGTAPQAFMQGEAVGEIRQVTLRRSKSNE
GLGFSIRGGSEHGVGIYVSLVEPGSFAENEGLRVGDQIVTVNGMLFDRVSHLEAVKVLKG
CKKLAMSVCSVGRIPGGYVTNNIYAWVDPHGRSVSPPSDLEQQSTLGPQHSQRRTGHTQE
KTVNLNLDDGLSLGLMIRGGAEYGLGIYITGVDPGSAADHGALKVGDQLLEVNGRSFVAI
PHDEAVRILKTSRHLLVKVRDVGRVPHARTVVDQTKWISSPNPPSPPPITESTASPAASR
PSSARATPVLGKSVCQGVGPPGFQVSLEEQAFLLLTDPERQTMGYYLREYKEGHIGLEPL
TMALFELFNTHAKLSLLSEVRSQVAPQELELYDGLVLHREREALKAWHGGIGSLHPAHLY
SRCLHTEPSASHSHSNPATLCSAKQECSHGDIVQQDPGATTNVLPDDTLNEVQSTAESPL
FFKPPPPSGPGQTQPRHPRDREREQSKRLLSRHSQSGLVFTAPTRLHQECHHKHLKAFQS
FSNHQTSTSPCSDLHHTCPNPGHHNSSNPGHHTTPNAGHHTTPNPGHHTTPNPGTSHSVY
PSSGNDTSMNSLHHTCQNSLHISTTTSSDHHTHQTHHGCSSSGHHSCPGSLHPKPSGPQN
KEKFIKLPIFRSCSHEKPLSPFPSPCPSPCPSLSVLGPPPCSPDRPCSPCSPSLSQGGLC
VMADAHRLTAEVRPEPQQRGTTLSQLSDSGQTLSEDSGVDIAEARGLSKDSSPWPTKNQA
SQATQGPQGTQGSAVLASKQQPGSPVPILTLVRVVKNANTLGIAIEGGANTRQPLPRIVT
VQKGGSAHSCGQLKVGQVILEVNGVSLRGREHRDAARIIAEAFKTKEKDHIDFLVTEFNT
ALLQGL
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcatgagcctcagctgcctcatgatctttcttgtttcacatcaccagaagct
tgcccctgcccggatagtttcagcaccaccgcggatgggacagctccccaggctttcatg
cagggggaggctgttggagagatccgccaagtgacactgagacgcagcaagagcaatgag
ggcttagggttcagtatccggggaggttctgagcacggtgtgggaatctatgtgtcgcta
gtagaacccggatcttttgccgagaatgaaggactgagggtcggggatcagatagtgact
gttaacggcatgctgtttgacagagtctcacacttggaggcagtcaaggtcctgaaaggc
tgtaagaagctggccatgtcggtgtgttcagtgggtcgcatccccggggggtatgtcacc
aacaacatttatgcctgggtggatcctcatggccgcagtgtgtcccctccctctgacctg
gagcagcaaagcaccctgggaccacaacacagccagagacgtacaggacatacacaggag
aagacagtaaacctgaacctggacgacggtctctctctgggcctgatgatcagaggaggg
gcggagtatggcctgggtatctacatcactggggtagaccccggctcagctgcagaccac
ggggcactcaaggtgggcgaccagttgctggaggtgaatgggcggagcttcgtggccatc
ccccatgacgaggcggtgaggatcctgaagacgagtcgtcacctgctggtgaaggtgagg
gacgttggccgcgtgccccatgcccgcaccgtggtggaccagaccaaatggatcagcagc
cccaacccccctagcccaccgcccataacagagagcaccgccagcccagccgcttcacgg
ccatcttcagcgcgggctacacctgtattaggaaagtctgtgtgtcaaggtgtggggccc
ccgggtttccaagtgtctctggaggagcaggccttcctgctgctgacagacccagagaga
cagaccatgggctactacctgcgggagtacaaggagggacacatcggcttggagcccctg
accatggccctgtttgagctcttcaacacccatgccaagttgtccctgctatctgaggtg
cgtagtcaggtggctccccaggaactggagctgtatgatggcctggtgctgcaccgcgag
agggaggctctgaaggcctggcacggaggaataggatccctacaccctgcgcacctatac
agccgctgtctacacactgagccctcagccagccacagccactccaacccggccactctc
tgctctgccaagcaggagtgctcacatggtgacattgtacagcaagatccaggggcaacc
actaatgtcctacctgacgatacattgaatgaagtgcagtctacagctgagtctcctctg
tttttcaagcctcctcctccctccggacccggacagacccagcccagacatccgagggac
agggagagggagcagtccaagcgcctcttatccagacactcccaatctggcctggtcttt
actgcccccaccaggctgcaccaggaatgtcaccacaaacaccttaaagccttccaaagc
ttctccaaccaccaaacttccacctccccttgctctgacctccatcacacctgtcccaac
cctggccatcataacagctccaaccctggccatcataccacccccaacgctggacatcat
accacccccaaccctggccatcataccacccccaaccctggcactagccatagtgtctat
ccaagctctggcaatgacacatccatgaactctcttcaccacacctgccaaaactccctc
cacatctccacaactacctcctccgaccaccacacccaccaaacacaccacggctgctcc
agctccggccaccattcctgccctggctcccttcatcccaagccctctggtcctcagaac
aaggagaaattcatcaagcttcccatcttcagatcctgctcccatgagaagcctctgtcc
ccctttccctccccctgtccttcaccctgtccctctctctcggttctgggacctccccca
tgtagtccagataggccctgctccccctgctctccctccctcagccagggaggtttgtgt
gtcatggccgacgcacacagactgactgctgaggtcaggcctgagccccagcagagaggc
accacattgtcccagctgtcagacagtggtcagactctgagtgaggacagtggggtggac
attgctgaggcacgagggctcagtaaagacagcagtccttggccaactaagaaccaggcc
agccaagccacacaggggccccaggggacccaggggtctgcagtactggcatccaaacag
cagcctggctctccagtgcccatacttactctggtacgtgtggtaaagaatgccaacact
ctgggcatcgctatagagggaggggcaaacacacggcagccactgccacgcatcgtcacc
gtacagaaggggggctcggcacacagttgtgggcagctgaaggtgggacaggtgattctg
gaggtgaacggggtctccctgaggggtagagagcaccgggacgctgctcgcatcatcgct
gaggccttcaagactaaagagaaggaccacattgacttcctggttaccgagtttaacaca
gccctactgcaaggcctttag
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