KEGG   Salmo trutta (river trout): 115199661
Entry
115199661         CDS       T08542                                 
Name
(RefSeq) whirlin-like
  KO
K21879  whirlin
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:stru03037]
    115199661
Cilium and associated proteins [BR:stru03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   115199661
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 LCL2_C
Other DBs
NCBI-GeneID: 115199661
NCBI-ProteinID: XP_029617830
LinkDB
Position
9:complement(35842686..35979746)
AA seq 906 aa
MNPHEPQLPHDLSCFTSPEACPCPDSFSTTADGTAPQAFMQGEAVGEIRQVTLRRSKSNE
GLGFSIRGGSEHGVGIYVSLVEPGSFAENEGLRVGDQIVTVNGMLFDRVSHLEAVKVLKG
CKKLAMSVCSVGRIPGGYVTNNIYAWVDPHGRSVSPPSDLEQQSTLGPQHSQRRTGHTQE
KTVNLNLDDGLSLGLMIRGGAEYGLGIYITGVDPGSAADHGALKVGDQLLEVNGRSFVAI
PHDEAVRILKTSRHLLVKVRDVGRVPHARTVVDQTKWISSPNPPSPPPITESTASPAASR
PSSARATPVLGKSVCQGVGPPGFQVSLEEQAFLLLTDPERQTMGYYLREYKEGHIGLEPL
TMALFELFNTHAKLSLLSEVRSQVAPQELELYDGLVLHREREALKAWHGGIGSLHPAHLY
SRCLHTEPSASHSHSNPATLCSAKQECSHGDIVQQDPGATTNVLPDDTLNEVQSTAESPL
FFKPPPPSGPGQTQPRHPRDREREQSKRLLSRHSQSGLVFTAPTRLHQECHHKHLKAFQS
FSNHQTSTSPCSDLHHTCPNPGHHNSSNPGHHTTPNAGHHTTPNPGHHTTPNPGTSHSVY
PSSGNDTSMNSLHHTCQNSLHISTTTSSDHHTHQTHHGCSSSGHHSCPGSLHPKPSGPQN
KEKFIKLPIFRSCSHEKPLSPFPSPCPSPCPSLSVLGPPPCSPDRPCSPCSPSLSQGGLC
VMADAHRLTAEVRPEPQQRGTTLSQLSDSGQTLSEDSGVDIAEARGLSKDSSPWPTKNQA
SQATQGPQGTQGSAVLASKQQPGSPVPILTLVRVVKNANTLGIAIEGGANTRQPLPRIVT
VQKGGSAHSCGQLKVGQVILEVNGVSLRGREHRDAARIIAEAFKTKEKDHIDFLVTEFNT
ALLQGL
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgaacccgcatgagcctcagctgcctcatgatctttcttgtttcacatcaccagaagct
tgcccctgcccggatagtttcagcaccaccgcggatgggacagctccccaggctttcatg
cagggggaggctgttggagagatccgccaagtgacactgagacgcagcaagagcaatgag
ggcttagggttcagtatccggggaggttctgagcacggtgtgggaatctatgtgtcgcta
gtagaacccggatcttttgccgagaatgaaggactgagggtcggggatcagatagtgact
gttaacggcatgctgtttgacagagtctcacacttggaggcagtcaaggtcctgaaaggc
tgtaagaagctggccatgtcggtgtgttcagtgggtcgcatccccggggggtatgtcacc
aacaacatttatgcctgggtggatcctcatggccgcagtgtgtcccctccctctgacctg
gagcagcaaagcaccctgggaccacaacacagccagagacgtacaggacatacacaggag
aagacagtaaacctgaacctggacgacggtctctctctgggcctgatgatcagaggaggg
gcggagtatggcctgggtatctacatcactggggtagaccccggctcagctgcagaccac
ggggcactcaaggtgggcgaccagttgctggaggtgaatgggcggagcttcgtggccatc
ccccatgacgaggcggtgaggatcctgaagacgagtcgtcacctgctggtgaaggtgagg
gacgttggccgcgtgccccatgcccgcaccgtggtggaccagaccaaatggatcagcagc
cccaacccccctagcccaccgcccataacagagagcaccgccagcccagccgcttcacgg
ccatcttcagcgcgggctacacctgtattaggaaagtctgtgtgtcaaggtgtggggccc
ccgggtttccaagtgtctctggaggagcaggccttcctgctgctgacagacccagagaga
cagaccatgggctactacctgcgggagtacaaggagggacacatcggcttggagcccctg
accatggccctgtttgagctcttcaacacccatgccaagttgtccctgctatctgaggtg
cgtagtcaggtggctccccaggaactggagctgtatgatggcctggtgctgcaccgcgag
agggaggctctgaaggcctggcacggaggaataggatccctacaccctgcgcacctatac
agccgctgtctacacactgagccctcagccagccacagccactccaacccggccactctc
tgctctgccaagcaggagtgctcacatggtgacattgtacagcaagatccaggggcaacc
actaatgtcctacctgacgatacattgaatgaagtgcagtctacagctgagtctcctctg
tttttcaagcctcctcctccctccggacccggacagacccagcccagacatccgagggac
agggagagggagcagtccaagcgcctcttatccagacactcccaatctggcctggtcttt
actgcccccaccaggctgcaccaggaatgtcaccacaaacaccttaaagccttccaaagc
ttctccaaccaccaaacttccacctccccttgctctgacctccatcacacctgtcccaac
cctggccatcataacagctccaaccctggccatcataccacccccaacgctggacatcat
accacccccaaccctggccatcataccacccccaaccctggcactagccatagtgtctat
ccaagctctggcaatgacacatccatgaactctcttcaccacacctgccaaaactccctc
cacatctccacaactacctcctccgaccaccacacccaccaaacacaccacggctgctcc
agctccggccaccattcctgccctggctcccttcatcccaagccctctggtcctcagaac
aaggagaaattcatcaagcttcccatcttcagatcctgctcccatgagaagcctctgtcc
ccctttccctccccctgtccttcaccctgtccctctctctcggttctgggacctccccca
tgtagtccagataggccctgctccccctgctctccctccctcagccagggaggtttgtgt
gtcatggccgacgcacacagactgactgctgaggtcaggcctgagccccagcagagaggc
accacattgtcccagctgtcagacagtggtcagactctgagtgaggacagtggggtggac
attgctgaggcacgagggctcagtaaagacagcagtccttggccaactaagaaccaggcc
agccaagccacacaggggccccaggggacccaggggtctgcagtactggcatccaaacag
cagcctggctctccagtgcccatacttactctggtacgtgtggtaaagaatgccaacact
ctgggcatcgctatagagggaggggcaaacacacggcagccactgccacgcatcgtcacc
gtacagaaggggggctcggcacacagttgtgggcagctgaaggtgggacaggtgattctg
gaggtgaacggggtctccctgaggggtagagagcaccgggacgctgctcgcatcatcgct
gaggccttcaagactaaagagaaggaccacattgacttcctggttaccgagtttaacaca
gccctactgcaaggcctttag

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