Salmo trutta (river trout): 115199674
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Entry
115199674 CDS
T08542
Name
(RefSeq) extracellular matrix protein FRAS1
KO
K23379
extracelluar matrix protein FRAS1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04512
ECM-receptor interaction
stru04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115199674
04518 Integrin signaling
115199674
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Cadherin_3
VWC
VWC2L_2nd
VSP
GF_recep_IV
Furin-like_2
Motif
Other DBs
NCBI-GeneID:
115199674
NCBI-ProteinID:
XP_029617840
LinkDB
All DBs
Position
9:42358933..42510745
Genome browser
AA seq
3059 aa
AA seq
DB search
MALDLCISRARTGVAAMGHDSSCSWEDHEYRDGEEWRPSPCSKCVCDSGLPQCYAAECQP
VACQPLDNLVIQPGHCCPQCVPNPCLSAGKEYKHGEQWQKSGCTRCVCDRGQSRCHTQTC
PPRTCEKGQTKVKRAGQCCDECVAAKGSCLYELTVRYHGDMWNGTGCEFCTCERGQVLCQ
RAQCARVECPTGSELVHLAGKCCPECQSMKTSCVYSHQASGKEQRRLANLERWSEGPCRE
CECREGRVTCYLASCPTCPLGMLAVPRQGQCCPECKQVQCQRDCMSCSGSPDHCESCKDS
NSLLLDGRCVSICPRGFYANGKVCAACQSSCATCEKDYECSSCGGSLLLNNRQCVATCEP
GSYKDHTQCLSCHASCSVCSGPSQQDCVWCSDPSHLLRDGLCVPDCDPGYYTQQGTCYAC
DSSCATCYPDNPKCTSCPQGSAMHHGKCISHCPEQHYIDDHGRCRACHSSCWSCSGPSVS
QCTLCSQGLSLHQGQCLEACGEGLYHQEQTCHICHPSCRRCLGPLASDCLRCLKPEEALL
PRNTHTHRTTPHGVCVATCPARFYLDALHTCRECHTSCLQCTGGSGQNCTSCTPPYVLLE
GQCVLSCPPGFNIQDNTCQGCHPSCQECSGPSKADCVSCPPLAKFHNGYCTTSCPEGEFL
HPQGYCQECNSDCLRCAADLQTGVGSVCLWCKAVRTLLLEDHCVTRCPLGHYPWHGACKR
CHASCEGCSGEGPLSCTSCPAPSFLLTSGLCAPTCPLGYYAEGDRRCRACGSQCLSCEMG
GVCTSCRDPGKVLMFGECQYDSCAHQYYLNTTIRACRECDWSCNECKGPLRTDCLQCMEG
HVLQDGLCTQSCSPGSYQNGERCLSCDEHCEVCHGPGQCGRCQTPYSTLQGHCVLECGRT
FFLDSSLKLCTPCSADCVECEGMGRCTVCRQNTYLRDGYCTPDCGHGFYSDKKTRTCHAN
SQSPTLHISGSLLVPIGGTKPLDSTILSAQDQDSPPESLVFQLLQPPATGRMVVLEGGRE
IEMSRDDTFSWAQLQSRQVRYTHDKDQAKSGQFTLRVADPQLFSQPETIQVQAVSMQPPQ
ILTNNPLLVDGGETAVISKAVLQIDDPDNPQDVLVMVLDPPQHGRLTRLNGDLALSQFKM
EELSREQVQYVHDGSPGQRDRMLLQVNDGNSYQNILMQITITQKLTQAPHVLSVPVTWVR
EGGMVQLGKRYLRTEYQGSSDDQIIYTIVSSKGSPKYGEVLLVPMPADGPLEGWQPSPDD
RSSTPTSSFTQQDVNEGTVWYKHFGTAGLTEGDTFLFQVSSEGSPDTLSDAQTFTIGVMP
ELPGFPQLAPACDLQITALEDRVTVLTPTALSFVDSETPSEKLVYNITKPLPQGQGSVEH
RDRPYNQVSFFSQADVNQGRILYRPPQAPSHLQELYQYSFTGLPESLNLYFTGIYYITSM
AYRAIILLLLLSSLHHSIPYNTIPYNIIPHRQEYMDNKATNLISKKELLSMDPDTDDGQL
VYEVTAEPKHGFLESKLKPGAPITSFTQADINLGLIRYVLHEESVTETMDNFKFLVKDSK
PNVVSDNLFHIQWSLISFQHRSYNVSEKAGTVSVTVKRTGNLNQYAIVLCRTEQGTATST
SSVGSRPGQQDYVEYAGQVQFDEREDTKVCTIVIQDDKVFEGVESFQVELSMPVYALLGQ
VTHASVNINDTEDEPTLQFDKKIYHVNESTGFIHAPIERKGDTSSTVSALCYTVPKSAKG
SSLHGLESGSDYKSRGMTVDSRVIFGPGVSMSTCDVKLIDDSEYELSEEFELHLSDASDN
ARMGDVKVAKVVIDGPNDASTVSLGNATFTYSEDAGTIEIPVLRQGSDLSSVTSVWCATR
PSDPPSATPGVDYIPSSRKVEFKAGKTMETCSLTIMDDIQNPAIEGAEAFVVFLSSPQGA
VLLEPFEASVVITDTLDLPSMQFEKTAYKVKEKAGVLNIPIVRTGDLTVKSSVRCFTRTM
SAMVMDDFEERRNADDSRIAFLKGEKVKNCTVHINDDSVFEPEEEFQVHLGTPQGDHWSG
AMVGVSDIVTVTITNDEDAPTIEFEQTSYQVREPPGPDGIEVLNIKVVRTGDQDRTSKVR
CSTRDGSAQSGVDYNPNSRVLKFTPGMDNILFKVEILSNEDREWHESFSLVLGPDDPVEA
VLGEITTATVTILDQEAAGSLILPATPIVVSLSDYDNVAEVSKEGSKKQPAPGYPLVCVT
PCDPHYSKYSVMRERCNEAGINQTSVHFSWEVAAPTDTNGARSPFETVTDTTPYTGVNHM
VLDSIYFSRRFHVRCVAQARDKSGHLGTPLRSNIATIGTEGSICHTPVTTGTARGFQAQS
FIASLKYLDVKHKEHPNRIHISVQIPHQDGMLPLVSSMPLHNLHFLLSESIYRQQHICSN
LVTLKDLQGVSETGFLDDVQYDSISLGPGYDRPYQFNPSVREAKSIQLYKHLNLKSCIWT
FDAYYDMTELIDVCGGSVTADFQVRDSAQSFLTVQVPLYVSYIYVTAPRGWASLEHHTEM
EFSFFYDTVLWRTGIQTDSVLSARLQIIRIYIREDGRLVIEFKTHAKFRGQFVPEHHTLP
GHKSHLMAPDHLGGIEFDMQLIWSAQSFDSPYQLWKATSSYSRKDYSGEYTVFLIPCTVQ
PTQPWTDPGDKPLSCTAHAPEKFQLPIAFQQTNRPVPVVYSLNTEFQLCNNEKVFMMDPA
VADMSMAEMDYKGAFSMGQTLYGRVLWNPEQNLNSAYKLQLEKVYLCTGRDGYVPFFDPT
GTLYNEGPQYGCIQPNKHLKHRFLILDRKQPDICDRYFHDVPFEANFASDITELQTMTAI
PGVDGFTMKVDALYKVEAGHQWYLQVIYVIGPDSISGPRIQRSLTYQLTHSSGGGRTRRD
LVNQLSQSIGHSRARRDLVDHSGRLTLDQSLIYDNEGDQTKNGTNMKTLRLEVPAASTFN
HQMGGSVGGGVAALTLLVLVLLASCLLFRKCRRSAGKKPSQMAEEYPLNTKVEVCLERTL
EKNFSSKHCTVRNININRNYDNVNSKVNRGAKVNGGAKVKQVNLEVKLHNNLNNDGTEV
NT seq
9180 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgacctttgcatctcccgagcccgtacgggagttgcggcgatgggacacgat
tcatcctgttcctgggaggaccatgagtacagggatggggaggagtggaggcccagcccg
tgctctaagtgtgtgtgtgatagcggactacctcagtgctatgcagcagagtgtcaacct
gtcgcctgccaaccgctggataatctggtgatacagccgggacactgctgcccacagtgt
gtccctaacccttgcctctccgctgggaaggagtacaagcatggtgagcagtggcagaag
agtggctgcaccaggtgtgtgtgtgatcgtggccagtctcgctgtcacacacaaacctgt
ccacccaggacctgtgagaagggccagaccaaggtaaagagggcagggcagtgttgtgac
gagtgtgtcgccgccaaaggaagctgtctgtacgagctcaccgtgcgttaccacggtgac
atgtggaacggcaccggctgcgagttctgcacctgcgagaggggacaggtcctctgccag
agagcccagtgtgctcgagtagaatgcccgacgggatcagagctggtccacctagcaggg
aaatgctgtcccgagtgtcagtccatgaagacctcttgtgtctactcacatcaggcctct
gggaaagaacagaggcgactagcaaacctggagaggtggagtgagggcccctgcagggag
tgtgaatgtcgtgagggcagggtgacctgctacctggcatcctgtcccacctgtcccctg
gggatgctggctgtgccccgccagggacagtgctgcccagaatgtaaacaggttcagtgc
cagagggactgcatgtcttgctcggggagccctgaccactgtgagagctgtaaggactct
aactctctgcttctggacggacgatgtgtgtccatctgtccacgtggtttctatgccaac
gggaaagtgtgtgcagcctgccagtcgtcctgtgccacatgtgagaaggactatgaatgc
tcttcctgtggggggtccttgctattaaacaacaggcagtgcgtggccacctgtgagccg
gggtcctacaaggaccacacacagtgcctgagttgtcatgcatcctgttcagtgtgctca
gggccgagccagcaggactgtgtgtggtgttctgatccgtctcacctcctcagagatgga
ctctgtgtcccagactgtgacccaggctactacacacaacaaggaacctgttatgcgtgt
gattcgtcctgcgctacctgttaccctgacaaccccaagtgcacgagctgcccccagggc
tctgctatgcatcatgggaaatgtatttcccactgtccagaacagcattacatagacgac
catggccgctgcagagcctgtcacagctcctgctggtcctgctccggcccctctgtgtcc
cagtgtaccctctgttcccagggactgtccctacaccagggccagtgtctggaggcctgc
ggagaagggctgtaccaccaggaacagacctgccacatctgccatccatcttgtaggaga
tgtctaggtcctctggcctctgactgtctgaggtgtctcaaaccagaggaggccctgctg
ccgcggaacactcacacacacagaacaacaccacacggagtgtgtgtggccacatgtccc
gctcgcttctacctggatgctctacacacctgcagagaatgccacacttcctgtttacag
tgcactggaggaagtggtcagaactgcacttcttgtaccccgccctacgtccttttggaa
ggccagtgtgtactcagctgtcccccaggcttcaacatccaggataacacctgccaaggg
tgccacccgtcctgccaggagtgtagcgggccgtccaaggctgactgtgtgtcctgccca
cccctggccaaattccacaacgggtactgcactaccagctgtcctgagggagagttccta
cacccccaaggatactgccaggaatgcaacagtgattgcctgcgctgtgcagcggaccta
caaacgggcgtgggcagtgtgtgtctgtggtgtaaggctgtcaggaccctgttgctagaa
gaccactgtgtcacccgctgtcccctcggccactacccctggcacggggcctgcaagaga
tgccatgcttcctgtgagggctgtagtggggaggggcctctgtcctgtacttcctgtccc
gcccccagctttctgttgacctcagggctgtgtgcccccacctgcccgctgggttactat
gccgaaggagacagacgctgcagagcgtgtggcagccagtgtctgtcctgtgagatggga
ggagtgtgtacgtcgtgccgtgacccgggcaaggttctgatgttcggggagtgccagtac
gacagctgtgcccatcagtactacctcaacaccaccatccgcgcttgcagagagtgtgat
tggagctgtaatgagtgtaagggtcctctgcgtacagattgtctacagtgcatggaagga
cacgttcttcaggatggactctgcacccagagctgctccccagggtcctaccagaacgga
gagagatgcctcagttgtgatgaacactgtgaagtgtgccatgggccaggccagtgtggg
cgatgccagactccttattccaccctgcagggccactgtgtgttggagtgtgggaggaca
ttcttcctggactcctctctgaagctatgtacaccatgctcagctgactgtgtggagtgt
gaggggatgggtcgctgcaccgtgtgcagacaaaacacttatctaagagacggatactgt
actccggactgtggccacggtttctatagtgacaagaagaccaggacttgccatgctaac
agccagtccccaaccctgcatatcagtggctctctgctggtacccattggagggactaaa
cccctggactcaaccatactctctgcccaggatcaagacagccccccagagagcttggtc
ttccagctgctgcagccccctgctacaggccgtatggttgtcctagaggggggcagggag
atagagatgtcccgagacgacaccttctcctgggcacagctacagagcagacaggttcgc
tacactcacgacaaggaccaggccaagagtggacagttcaccctgcgtgtagctgacccc
cagctcttttcccaaccagagaccattcaggtccaggcagtgtccatgcagcccccacag
attcttaccaacaatcctttgctggtggacggaggggagacggcggtcatctccaaggcc
gtgcttcagatcgacgacccagacaaccctcaggatgtcctggtcatggttctggacccg
ccccaacatggccgcctaacccgtctcaatggcgacctggcgctaagccagttcaagatg
gaggagttgtcacgggaacaggtgcagtatgtccatgatgggtcgccagggcaacgggac
aggatgctgctacaggtcaacgatggaaacagctaccagaacattctaatgcagatcacc
attactcagaagcttacccaggctcctcatgttctgtcggtgcccgtcacgtgggtgaga
gagggaggcatggtacaactggggaagaggtatctgaggacagagtatcagggttccagt
gatgaccagatcatttacaccatagtgagctctaaaggaagccccaaatacggtgaagtg
ctgttggtgccaatgccagccgacggtccgttggaaggttggcagccctcgcctgacgac
aggagctctacccccacctcctccttcactcagcaggatgtgaatgagggcactgtgtgg
tacaaacactttggcaccgccggcttgacggaaggagacaccttcctgttccaggtgtct
agtgagggctccccagacacgctcagtgatgctcagaccttcaccatcggagtgatgcct
gaactcccagggttcccccagctggcccccgcctgcgacctacagataacggcgctggaa
gatcgtgtgaccgtgctaacacccacagctttgtcctttgtggactctgagacacccagt
gaaaagcttgtctacaacatcaccaagcccctacctcagggacaaggttctgtggagcat
cgtgacagaccctacaaccaagtgtctttcttcagccaagctgacgtcaaccagggacgg
atcctgtaccgtcctccgcaggccccctctcacctccaggagctctaccagtactccttc
actggtctgccagagtctctgaatctctatttcacaggtatatattatattacctctatg
gcttacagggcaatcatactccttctcctcctctcctctctacaccattccataccatat
aataccataccatataatatcataccacatcgtcaggagtacatggacaacaaggccacc
aacctgatcagtaagaaggagctgttgagcatggacccagacaccgacgatggtcagctg
gtctatgaggtcacagcagagcctaaacacggcttcctagagagcaaactgaaacctggg
gctcctatcacctccttcacacaagctgacattaacctgggcttgatccgctacgtgctc
catgaagagagcgtgacagagaccatggacaactttaagttcctggtgaaggacagcaag
cccaacgttgtctctgataacctgttccatatccagtggtccctcatcagcttccaacac
aggagctacaatgtgagtgagaaggctggcacggtgtcagtcacagtgaagaggacgggc
aacctgaaccagtatgccatcgtgctgtgtcgtacggaacagggcaccgccacctcgacc
tccagtgtgggctctcgtcccgggcagcaggactacgtggagtacgctggacaggtccag
tttgacgagcgggaggacaccaaggtgtgtaccatagtgatccaggatgacaaggtgttt
gagggcgtggagagtttccaggtggagcttagcatgcccgtctatgccctcctgggtcag
gtgacccacgccagcgtcaacatcaacgacacagaggacgaacccacgctgcagtttgac
aagaagatttaccacgtcaacgagagtaccggcttcatacacgcccccatagagaggaaa
ggtgacaccagcagtacggtctcagctctctgttacacggtccctaagtcagctaagggt
agcagtctacacggcctggagtctgggtctgactataagagtcgaggtatgactgttgac
agcagggtcatcttcggccccggcgtctccatgtccacctgcgacgtcaagctcattgat
gacagcgaatacgaactctccgaggagtttgagctccacctatcggatgcctcggataac
gcccgcatgggtgatgttaaagtggcaaaggtggtcattgacggaccaaatgatgcttcg
acggtatccctgggcaacgctacgtttacgtacagcgaggacgctggcaccatagagatt
ccggtgttgcggcaggggagtgacctgtcgtcagtgacctctgtgtggtgtgccacgcgc
ccctctgatcccccctccgccacccccggggtcgactacatcccctcctccaggaaggtg
gagttcaaagctggcaagactatggagacgtgcagtctcaccatcatggatgacattcag
aacccagccattgagggggcggaggcttttgtagtgttcctctcctcccctcagggggcg
gtgctcctcgaacccttcgaagcctccgtggtcatcactgataccttggatctacccagc
atgcagtttgagaagacggcgtacaaggtgaaggagaaggcaggcgtgctgaacatcccc
atcgttagaacgggagacctaacggtcaagtcctctgtccgctgcttcacgcgcaccatg
tctgccatggtcatggacgactttgaggagaggaggaacgcggacgactcacgtatcgcc
ttcctcaagggagagaaggtaaaaaactgcacggtgcacatcaatgacgactctgtgttc
gagccagaggaggagttccaggtgcatcttgggacaccgcaaggggaccactggagcggg
gctatggtgggagttagtgacattgtcacggtaaccatcactaacgacgaggacgccccc
accatagagtttgagcaaacgtcgtaccaggtgcgggagcctcccgggccagacggcatc
gaggtgcttaacatcaaggtggtcaggacaggagaccaggaccgcacctccaaggtccgc
tgcagcacccgagacggatcagcccagtccggagtggactacaaccccaacagcagggtc
ctcaaattcacccctggcatggacaacatcctgttcaaagtggagattctgtccaatgag
gacagagagtggcacgagtccttctcattggtcctcggtcctgacgatccggtggaggca
gtgcttggagagatcaccacggcaacagtcaccatcctggaccaggaagcagcagggagt
ctcattctcccggccacgcccatcgtggtatctctgtcagactatgacaacgtggctgag
gtgtctaaggagggcagtaagaagcagcctgcgcctggttaccccttggtgtgtgtgacg
ccctgcgacccgcactactccaaatactctgtgatgagggagcgctgcaacgaggcaggc
atcaaccagacctctgttcacttctcctgggaggtggctgcccctacagacaccaacggg
gccaggtcacccttcgagaccgtcactgataccacaccctatactggtgttaaccatatg
gtcctggacagtatctatttctctcggaggttccatgtgcgctgtgtggcccaggcccgg
gacaagtccggccatcttggaacacccctgaggagtaacatagcaaccatcggcaccgag
ggttccatatgccacacccctgttaccacgggaacagcccgagggttccaggcccagtcg
ttcatcgccagtctgaagtatctggatgtcaaacacaaggagcaccccaaccgtatccac
atctcggtgcagatcccccaccaggatggtatgctgcccctagtgtccagcatgcccctc
cacaaccttcacttcctgctgtcagagtccatctacagacagcagcacatctgttcaaac
ttggtcactctcaaagacctgcagggggtctctgagacgggtttcctggatgatgtccag
tatgacagtatctctctgggtccgggttatgacagaccctatcagttcaaccccagtgtc
agagaggctaagagcatccagctgtacaaacacctcaacctgaagagctgtatctggaca
tttgatgcctactacgacatgacggaactcatagacgtctgtggaggctcagtcactgcc
gacttccaggtgcgtgactcggcccagtcgttcctgacggtgcaggttcctctctatgtg
tcgtatatctacgtaacggctcccaggggctgggcttctctggaacaccacactgaaatg
gagttctctttcttctacgacaccgtgctctggaggacaggcatccagacagacagcgtt
ctgtcagccagacttcagataatcaggatctacataagagaagatggacgtctggtcatc
gagttcaaaacacacgccaagttcaggggccagtttgtccccgagcaccacacccttcct
gggcacaagtcccacctgatggccccggaccacctgggagggatagagttcgacatgcag
ctcatctggagcgcccagtccttcgactctccctaccagctctggaaggctacctcctct
tacagcaggaaagactactctggagagtacacagtgtttctgatcccctgtaccgtgcag
ccaacccaaccatggaccgaccctggagacaagcctctgtcctgcacagcccacgcccca
gagaagttccaactacctatagccttccagcagaccaaccgaccggtgcctgtcgtgtac
agtctcaacacagagtttcagctgtgcaacaatgagaaggtgttcatgatggacccagcc
gtcgctgacatgtccatggctgagatggactacaagggagccttctctatgggccagaca
ttgtatggcagggtgctgtggaacccggagcagaacctgaactcagcctacaagctgcag
ctggagaaggtgtacctgtgtaccggacgagatggatacgtgcctttcttcgaccccaca
gggactctgtacaacgagggccctcagtacggctgcatccagcccaacaaacacctcaaa
cacaggttcctgatcctggaccggaagcagcctgacatctgtgacaggtacttccatgac
gttcccttcgaggctaactttgcgtcggatatcaccgagctacagaccatgacagccata
cccggtgttgatggatttaccatgaaagttgatgccctgtacaaggtggaggcggggcat
cagtggtaccttcaggtgatctacgtgattggtccagattccatatccggccccaggatt
cagcgctctctgacctatcagctcacccacagcagcggcggggggcggactcgccgggac
ctggtcaatcagctgagccaaagcatcggccacagccgtgctcgccgggaccttgttgac
cacagcggacgtctcactctagaccagtctctgatatatgacaacgagggcgaccagacg
aagaacggaaccaacatgaagactctccgcctcgaggtccccgctgcctcaacctttaac
caccagatgggcggttcggtgggcgggggcgtggccgcactaaccctattggtcctcgtc
ctgctggcttcatgtttactcttcaggaagtgccgacgatcggctgggaagaagccgtcc
cagatggcggaggagtaccctctgaacaccaaagtagaggtgtgtttggagaggaccctg
gagaagaacttcagctccaaacactgcaccgtcaggaacatcaacatcaaccgcaactac
gacaacgtcaactccaaggtcaacagaggcgcaaaggtgaacggaggggcaaaagtcaag
caggtcaacttggaggtcaagctccacaacaacctcaacaacgacggcaccgaggtctga
DBGET
integrated database retrieval system
