Salmo trutta (river trout): 115199680
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Entry
115199680 CDS
T08542
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
stru00535
]
115199680
04091 Lectins [BR:
stru04091
]
115199680
Proteoglycans [BR:
stru00535
]
Cell surface proteoglycans
Others
115199680
Lectins [BR:
stru04091
]
C-Type lectins
Others
115199680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
115199680
NCBI-ProteinID:
XP_029617847
LinkDB
All DBs
Position
9:44245384..44302548
Genome browser
AA seq
1785 aa
AA seq
DB search
MCKPSATTTIGSVGMRVGMRVGMRSDMRVRVDMRVGIRVGMRVGMRVGMRVGMRVGVRMV
VRVCVDMRVGMRVDMRVGMCVGMRVGMCSDMRVGMRVDMRVGMCVGMRVGMCSDMRVGMR
VDMRVGMRVGMRVGMRVGMCVGMRVGMRVGMRVDMRVGMRVGMCSDMRVGMRVDMRVGMR
VGMHSDMRSDMCVGIRSDMRVGMRVGMRVDMRVGIRVASIYGDGYVQLKAVESSNRNSLR
VRFRTSSPHGLLFLAAGHTDYLLVELNSGCLQVVVYDITVVYDITVVYDITVVYDIIVVS
YLWSDSLSSQLTVKLDLGSGECLLRSESSTQLNDLAWHTAELLHDRHNVTLTVDQHSHTS
LRMPGHGSQKQELSIQEGLYIGGSGGLDKLYLPSDLTGFRGCMDEAVFNEHDMLSSLRPY
AGFKSVYEVYLGCSPQFFANEEDPVSFFSSRAYVSLPPWNISHVQQEALFECVVHTSAKE
GIILYNSARQGGFVAVEIQEGLPVALVGKGDTKTELRSLTFVNDRNWHSIKLFFSPKTLQ
LTVDEETVKTSISSRSKGLQLRGSVFVGGIDDKTRSEVRKMGLVSVSGKRVRGGSFKGCL
KDMKVNGVKMGLPNAAVTKDISVGCGPEKEPEPSTTMSPMTLPTVPKSHFDPTSVTPTPE
FPMSTLDRGLDKRYGMNFVLLRNLVVPEGGRGSLESKHIKVLLDFKKLRIRQSQIMFRIQ
EQPVHGQIRLDVDQDQEENTFSMLDLWYGKVMYIHGGSENPEDFFTFSIFSSSRKEVPDY
LKGTRMYRYNITVMPINDAPELSLPQGNLFILLDNSRKHLTTEVLKATDIDSNHTNLIFS
VLGNLNTDAGYLEVEDKTGAAVTTFSHSDLNEGKVNYVHTGARNSRIVLRVSDGDKVSNT
VVLRIMAIGLEYKIGNNTGLEITQGEVSVISNKHLAVQTNAVKQVVDIRYDVVEPPQYGE
LQRLHSSGEWKPTGSFSQRLLEKERLRYLSTFQEIQTANATDYFKCKVTVAGRVDTELVF
PITVKWVHYNLVRNVMADIDKVRKVTLDSQYLYATVDVVTLSEDDLHFRVLSSPKKGQLL
LVNKLLKKNSTFSQRNVTDLKVQYELVDRPCEDTSDTFKFQVFSKHAQTQSYDFQISIKA
DVNSVFIRNYGLLIKEGESKLITKAELFAETLSTKEMYYTVTSSPKHGTLQRINLSNSKT
SYNIIQTFSNQDLLEERVMFIHDDTETTQDQFTFIASTSQESKSSVTDDEVSSEEGTFNI
SIQLVNDEKPVRVVDKVFHVVRDGQRLLTLDDLCYHDADSDFSDGQLVYTRRGIPMGDLV
LVNDTSRRLFQFTQKDLEEKRVLFLHRGVSSGRFVLFVSDRKHFVSTLLDVTAEDPFLRL
GNNTGLLVQKGQEVTLTTGNFSVLTNLDIRDDSEVTYKVSEPPRNGGLYRHGNISMQSFT
QRDLKKGLVSYRHDDRKNLADSFDVTVKVKGTYLNARINVKVYLDSHQRPPILQHNNTLL
VEESKPVKIDQSRLEVIHEDNLPSEIVFTVKAAPLHGVIRRFVKAEEQYVGTEQTPVQTF
SQEDVNAGNVQYMQTAPGQVNDTFLLDVSNGVTEVNNISMSVDIIAHLIPLQVLNFTLRE
GGSKALTQEVLRVTNRHFSGLNFLYSLSEPPQNGHIEHSRYPGVPLRVFTRHQVEQGIIY
YIHDSSETLEDNFTVVANDTGLRKQSSPCTVYIQVTAVNDQHPIITANRVLRVSPPVITT
KQGSQGESSSHHHQQGSQGESSSHHHQQGSQGESSSHHHQTGFSG
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaagccaagcgccaccaccactatcggtagtgtgggtatgcgtgtgggtatgcgt
gtgggtatgcgttcggatatgcgtgtgcgtgtggatatgcgtgtgggtatacgtgtgggt
atgcgtgtgggtatgcgtgtgggtatgcgtgtgggtatgcgtgtgggtgtgcgtatggtt
gtgcgtgtgtgtgtggatatgcgtgtgggtatgcgtgtggatatgcgtgtgggtatgtgt
gtgggtatgcgtgtgggtatgtgttcggatatgcgtgtgggtatgcgtgtggatatgcgt
gtgggtatgtgtgtgggtatgcgtgtgggtatgtgttcggatatgcgtgtgggtatgcgt
gtggatatgcgtgtgggtatgcgtgtgggtatgcgtgttggtatgcgtgtgggtatgtgt
gtgggtatgcgtgtgggtatgcgtgttggtatgcgtgtggatatgcgtgtgggtatgcgt
gtgggtatgtgttcggatatgcgtgtgggtatgcgtgtggatatgcgtgtgggtatgcgt
gtgggtatgcattcggatatgcgttcggatatgtgtgtgggtatacgttcggatatgcgt
gtgggtatgcgtgtgggtatgcgtgtggatatgcgtgtgggtattcgtgtggcctcgatt
tacggtgatggctatgtgcagctcaaggcggtggagtcttcgaaccgtaactccctgcgt
gttcgcttccgtacctccagcccccacggcctgctcttcctcgctgccggccatacagac
taccttctagtggagctgaactctggatgcctgcaggttgtggtctatgacatcacagtg
gtctatgacatcacagtggtctatgacatcacagtggtctatgacatcatagtggtctct
tacttgtggtcggactcactcagctcccagctgaccgtgaagctggacttggggtccggt
gagtgtttgctacggtctgagagtagcacccagctaaatgacctggcctggcacactgct
gagctcctccacgaccgccacaatgtcaccctgaccgtggaccagcactcccacaccagc
ctcaggatgccagggcatgggtctcagaaacaggagctgagtatccaggaagggctgtac
atcggcggctctggaggcctggacaagctctacctccccagtgacctgactggtttccga
gggtgtatggacgaggctgtcttcaacgagcatgatatgttatcgtcgttgagaccttac
gcaggattcaagagcgtctatgaggtttatttgggctgtagtccccagttcttcgctaat
gaggaggaccctgttagtttctttagttctagagcgtatgtctccctgccaccctggaat
atctcccacgtccagcaggaggctctgtttgagtgtgtggttcacacctcagctaaagag
gggatcatcctgtataactcggccagacaggggggctttgtggcagttgagatccaagag
gggttgcctgtggccctcgtgggtaaaggagacaccaaaacagaactccgctcccttacc
ttcgtcaatgacaggaactggcattcaatcaaactgttcttcagccccaagaccctccag
ctgacagtggatgaggagacggtaaagactagcatcagctctcgctccaagggactacag
ctgaggggttctgtctttgttgggggcattgacgacaaaacgcgctcagaagtccgcaag
atgggtctggtgtctgtgtcagggaagagagtcagaggaggctcgttcaagggctgtctg
aaggacatgaaagtcaacggggtgaagatgggtctgcccaacgctgctgtcacgaaggat
atctctgtgggctgcgggccagagaaagaaccagagccctcgaccacgatgagtccaatg
actcttccgactgtccccaagtcccacttcgatcccacttccgtcacccccacaccagaa
ttccccatgtctactctggacagggggctggacaagaggtacgggatgaacttcgtgctg
ctcaggaaccttgtggtccctgagggaggacgtggatctctcgaatccaaacacatcaag
gttctcctggacttcaagaagctccgaatacggcagtcccagatcatgttccggatccaa
gagcagccggtgcacggtcagatcagactggatgtagaccaggaccaagaggagaacacc
ttcagcatgctggacctgtggtacggcaaggtgatgtacatccacggaggatcagagaac
ccagaagacttcttcaccttttctatcttctccagcagcaggaaggaggttcctgactat
ctgaaagggaccaggatgtatcgctataacatcacagtgatgcccatcaacgacgcccca
gagctcagcctgccccaggggaaccttttcattctgttggataactctagaaaacacctg
accacggaggtgttgaaggccacagacatcgacagcaaccacaccaacctaatcttctcc
gtcctgggaaatctgaacactgacgcaggttacctggaggtggaagacaaaaccggcgct
gcagtgaccacgttctcccattctgacctaaatgaagggaaagtgaactatgtccacact
ggggcgaggaactccaggatcgtcctgagggtcagtgatggagacaaggtgagcaatacg
gttgtgcttaggatcatggccattgggttggagtataagatcggcaacaacaccgggctt
gagataactcagggtgaggtgtctgtgatcagtaacaagcatctggccgttcagaccaat
gctgtgaagcaggtggtggatatccgatatgatgttgtcgagccccctcagtatggtgag
ctgcagaggcttcactccagcggtgaatggaagcccactggttccttctcccaaaggcta
ctggagaaagaacgccttcggtacctcagcactttccaagaaatccagactgcaaatgct
acggattacttcaaatgcaaggtcactgtagctggtagggtcgatactgaactggtcttc
cccatcactgtgaagtgggtacattataacctagtaaggaatgtaatggccgacattgat
aaagttcggaaagtgacgttggactcgcagtatctttatgccactgtggacgttgtgaca
ctatcagaggatgatctgcacttcagagttctatcctcaccaaagaaaggacaacttctg
cttgttaacaagttactgaagaaaaactcaacattcagccaaaggaatgtcactgatcta
aaggtacaatacgaactggtcgacagaccgtgcgaagacacgagcgacacgtttaaattc
caagtgttctccaaacatgctcaaacgcaaagttacgatttccagatctcaataaaagcc
gatgtcaatagcgtatttataagaaattatggacttttgattaaggagggagagagtaaa
ctcatcacaaaggcagagttgtttgcagagactctcagcaccaaggagatgtactacact
gtcacaagtagccccaaacacgggacgctgcaacgcatcaacctgtccaactccaaaacc
agttacaacatcatccaaacgttcagcaatcaggatctcttggaggagcgcgtcatgttc
attcacgacgacacagaaaccactcaggaccagttcacattcatagcctccactagtcag
gagtccaaatcctccgtcacggacgacgaagtcagctctgaagaagggacgttcaacatc
tccatccagctagttaatgacgagaagccagtgcgcgttgtcgataaagttttccatgtg
gtgagggatgggcagcggttgctcaccctggacgatctatgttaccatgatgcagactcg
gacttcagcgatgggcagttggtctacacgcgacggggaatcccgatgggagacctggtt
ctggtgaacgacacctctcgcaggctgttccagtttacccagaaggacctggaagagaag
agagtgctgttcctccatcgaggcgtgagctccggacgcttcgtgctcttcgtgtccgac
aggaaacactttgtctccactctgctagacgtcactgccgaagaccctttcctaagactc
ggcaacaacacaggtctgttagtccagaagggacaggaagtgaccctaaccacaggtaac
ttcagcgtgctcacgaacctcgacatccgagatgacagcgaggtcacatacaaggtgtcc
gagccgcctagaaacggcgggctgtatcgccacggcaacatctccatgcagtcattcacc
cagcgcgacctgaagaagggccttgtttcgtatcgccatgatgacagaaagaacctggcg
gactctttcgacgtgacagtgaaggttaaaggcacttatctgaacgccagaatcaatgtt
aaggtttacctggacagccatcagaggccccctatccttcagcacaacaacactttactg
gtggaggagagcaaacctgtgaagattgaccagagtagactggaggtcatccacgaggac
aacttgccgtctgagattgtatttacagttaaggcggccccgcttcacggggtcatccgg
cgtttcgtgaaggctgaggagcagtatgttggaacagaacagacccccgtccaaaccttc
tcccaggaagacgtaaacgctggcaacgtccagtacatgcagacagcccccggccaggtc
aatgacaccttcctattggatgtctccaacggggtcacggaggtcaacaatatcagcatg
tccgtggacatcatcgcccacctcatccctctacaggtgttgaacttcaccctcagagag
ggcgggtccaaggctttgacccaggaagtgctcagggtcaccaaccgacacttctctggc
ctcaacttcctgtatagcttgtctgaacccccgcagaatggccacattgaacattcacgt
taccccggggttcctctacgggttttcaccagacaccaggtggagcaggggataatctac
tacatccatgacagcagtgagacattagaagacaacttcaccgttgtggccaacgacaca
ggcctgaggaaacagagctctccctgcaccgtgtacatccaggtcacagccgtcaacgac
cagcatccaatcatcaccgccaacagggttctcagggtgagtcctccagtcatcaccacc
aaacagggttctcagggtgagtcctccagtcatcaccaccaacagggttctcagggtgag
tcctccagtcatcaccaccaacagggttctcagggtgagtcctccagtcatcaccaccaa
acagggttctcagggtga
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