Salmo trutta (river trout): 115199728
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Entry
115199728 CDS
T08542
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115199728
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115199728
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
HDA2-3
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
115199728
NCBI-ProteinID:
XP_029617971
Ensembl:
ENSSTUG00000016126
UniProt:
A0A673YWE0
LinkDB
All DBs
Position
9:2735718..2761957
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AA seq
1017 aa
AA seq
DB search
MSLFNLERFRFDKNKPTSNQDKYSGSVSPESEKENKPAQVTTPVSDLGKPGRGVVFEDVI
SDSDDLASDSRSDKLTERVTEPVKESLKREVREMTETSDKEDKMDKELEERLAKLQEIFP
QRDGKELLEVIKSTSTLDGAIASCLMFGDKDSTRKRKQDGSSSSQDSEVVQQPSKKRRPS
LTEDSEEGAEPSWERREAMVRKLQRKFPDQDKEELRSVLQEHEWNVDDALEVLRMFSDPD
EDSSAPEVSSSPEVKQKELNAKSNGKAKSDAKSSRDRWESKDSKEEARRSNASALKWMFK
KPAPEFRPYSSSSSSTSTSQKLSNGTSVAKKEASERKRKARASYERASSSEDEDTEGASS
EFEGEDDELDFLAGDEGTSTLKDQILHFFQEASLDELSLIAGCSLKKGQKIVELRPFAVW
QDLEEVFHKENGLSAELLLGCRVVLRERAVVQGLMSKCQTISGKMVKGVTQVIDKGMGSM
TQPSVLNRKLQLKPYQLIGLKWLLLLHQHKLNGILADEMGLGKTIQAIAFLGRLHQDGID
GPHLITVPSSTLDNWVRELKLWCPSLKVLVYYGSVEDRRYLRHDILSNQVDFNVIVSTYN
LAIGNDSDRSLFRKLRLKYAVFDEGHMLKNMNSLRYRHLMAINAEHRLLLTGTPLQNNLL
ELMSLLNFIMPSMFSSSTTQIAKMFSMKSHEEQSRFERDRIAQAKLIMKPFILRRVKSEV
LKQLPAKEEKLEFCTMSEKQQLLYQNMVGKLKKSAIGEKKELCNVMMQLRKMANHPLLHR
QYYTTERLKAMSHLMLKEPTHFDADPVLIQEDMAVMSDFELHRLCQQYSSLHEFQLDKDL
LLDSGKFHLLQTLLATLKTKGDRVVLFSQFTMMLDIVEILLKHLGHRYVRLDGSTPIADR
IVLIDDYNMDPEIFVFLLSTRAGGLGINLTSANVVIMHDIDCNPYNDKQAEDRCHRLGQT
RTVQVIKLIHKDTIEGGMLQLGQKKLKLEQDMTAAEEGDEGTMSEDMAALLKASLGL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttaatttagagcggtttcgttttgacaagaataaaccgacatcaaaccag
gacaaatacagcggttccgtaagtccagagtcggaaaaggagaataaaccagcacaagta
acaacacctgtatccgaccttggaaaacctgggcgaggagtagtatttgaagatgtcatc
agtgactctgacgatttggcaagcgactcgagaagtgataaattaacagaaagggtgacg
gaacctgtaaaggaatcactgaagcgagaggtaagagagatgactgagacatctgataag
gaagacaaaatggacaaggagctggaagagagactggccaaactgcaggaaatcttccct
caaagagacgggaaggagctgttggaggtgattaaaagcacaagcactttggatggtgcc
atagcctcatgcctgatgtttggtgacaaagactcgacacgaaagaggaaacaggatggc
tccagcagttcccaagacagcgaagtggttcagcagcccagtaagaagaggagaccgtct
ctgactgaagactctgaggagggagcagagcccagctgggagagacgggaggccatggtc
aggaaactgcagaggaagttccccgaccaggataaggaggaactgaggtccgtgctccag
gaacatgagtggaacgtggatgatgccctggaggtgctgcgcatgttctcggacccagat
gaagactctagtgcacctgaagtatccagctcccctgaagtcaagcaaaaggaactgaat
gccaagagtaatggcaaagcaaagagtgatgccaagtcgagcagagaccgttgggagtct
aaggatagcaaggaggaggccaggcgaagcaatgcttccgctctgaaatggatgttcaag
aaacctgcacctgaatttaggccttactcctcgtcctcctcttcgacttctaccagccag
aagctctccaacgggaccagtgtggctaagaaggaggcgtcggagaggaagaggaaggct
cgagcctcctacgaaagggccagcagctcggaggatgaggacacggagggggccagcagc
gagtttgagggcgaggacgacgagctagattttctggcgggggacgagggcacatccacg
ctcaaagaccagatcctgcacttcttccaggaggcctcgctggatgagctgtccctcatc
gccggctgctcgttgaagaaaggccagaagattgtggagctacggccctttgctgtttgg
caggacctggaggaggtgttccacaaagagaacggcctgtctgcagagctgctgctgggc
tgcagggtggtgctgagggagagagccgtggtccagggcctcatgtccaagtgccagacc
atctcgggcaagatggtgaagggagtcacccaggtcatagacaagggcatgggctccatg
acccagccctcagtcctcaacagaaagttgcagttgaaaccctaccagctgattgggctg
aagtggcttctcctgctgcaccaacacaagctgaatggaatcctggctgacgagatgggt
ttgggaaagaccatccaagccatagccttcctgggcagactgcaccaggacggcatcgac
ggcccccacctcatcacagtgccctcctccacccttgataactgggtgcgtgagttaaag
ctgtggtgccctagtctcaaggtgttagtgtattacggctctgtggaggaccggcggtac
ctgcgacatgacatcctcagcaatcaggtggacttcaacgtcatcgtgtccacctacaac
ctggccatcggcaacgacagcgaccgcagtctcttccgcaagctcagactgaagtacgcc
gtgttcgacgagggccacatgctgaagaacatgaattccctccgttaccgccacctcatg
gccatcaacgccgagcaccggctgctcctgaccggcacccctctgcagaacaacctgctg
gagctgatgtcgctgctcaacttcatcatgccctccatgttctccagcagcaccacgcag
atagccaagatgttctccatgaaatcccacgaggaacagagtcgttttgagagggaccgc
atcgcccaggctaaactcatcatgaaacctttcatcctcagacgagttaagagcgaggtt
cttaagcagctgccagcgaaggaggagaagctggaattctgcaccatgagcgagaagcag
cagctgctttaccagaacatggtgggcaagctcaagaagtctgccatcggagagaagaaa
gagctgtgcaacgtgatgatgcagttgaggaagatggccaaccaccctctgctccaccgg
cagtactacaccacagagagactcaaggccatgagtcacctcatgctcaaggagccgacc
catttcgacgcggacccggtgctgatccaggaggacatggcggtgatgtcggactttgag
cttcaccggctgtgccagcagtactcgtcactgcacgaattccagctggacaaagaccta
ctgctggactccgggaagtttcacctgctccagacgctactggccacacttaagaccaag
ggagaccgggtggtactcttcagtcagttcaccatgatgctggacattgtggagattctg
cttaaacacctgggccatcgctacgtccgactggatggctccacaccaatagcagacagg
atcgtgctgattgacgactacaacatggatccggagatctttgtgttcctgctgtcgacg
cgggcgggtggcctgggcatcaacctgacctcagccaacgtggtcatcatgcacgacatc
gattgtaacccctacaacgacaagcaggcagaggaccgctgccacagattgggccagact
aggactgtccaggtgatcaagctgatccataaggacacaatagagggtggcatgctgcag
ctgggccagaagaagctcaaactggagcaggacatgaccgctgccgaggagggtgatgag
ggcaccatgtctgaggacatggccgccctcctcaaggcatcgctgggcctgtga
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