KEGG   Salmo trutta (river trout): 115199800
Entry
115199800         CDS       T08542                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
stru  Salmo trutta (river trout)
Pathway
stru04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    115199800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:stru03036]
    115199800
Enzymes [BR:stru01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     115199800
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     115199800
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln Clp1
Other DBs
NCBI-GeneID: 115199800
NCBI-ProteinID: XP_029618112
LinkDB
Position
1:52941698..53017253
AA seq 1145 aa
MLLRPTVPGLCAMLQTIYETESCFSSDAVSSRAQPLELLPQSQVSDMPSAAVEVKTTLPS
GMQSPVGGSEQGVGGGGGPVDLRTDPRLGPLGGGGVGGGVDPAMREQQLQHELLLLKQQQ
ELQKQLLFAEFQKQHEVLTRQHEVQLQEHLKASLQQQQEILAAKRQQELEQKRKLEQQRH
EELEKQRLEQQLLMLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGTPGGLNHSFPQKCW
GAHHTSLDPNSPPQSNTPGTPPSYKLPPLLGSYEVRDDFPLRKTASEPNLKVRSRLKQKV
AERRSSPLLRRKDGTVISTFKKRAIEISVSSMCSSAPGSGPSSPNSSNSAIAENGSSGSV
PNIHAEQLRSLHQTLNADGTVSPLSLYTSPSLPNISLGLPANSHLTANQKLLQEAERQAI
QTMRQGGALTGKFVSTSSLPASCLPPGMQHDLDSTQAPNSHSSHSSLLQHVLLLEQARQQ
SALLSVPMYGQSPLVTGERVSNSMRTVNKLPRHRPLSRTQSAPLPQSPQALQQLVMQQQH
QHFLEKQKQYQLNKILSKGVELPRQPPTHPEETEEELTETQEMQEEWAGSERLGEGRPQE
QRLQKEESGETSPPSERLLTPLKGESTESDLEEEDDEDEAIELRECDEEGVPYGQHHLQQ
LNVFQASLSISGMPHRPLGRAQSSPATASIKGAPMGEVPIKHLFTTGLVYDTFMLKHQCM
CGNTHIHPEHAGRIQSVWSRLQETGLLGRCERIRGRKATLDEIQTVHSEYHTLLYGTSPL
NRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSGAVRMAVGCVIELAFKVAA
GELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVSKILIVDWDIHHGNGT
QQAFYNDPNVLYISMHRYDDGNFFPGSGAPEEVGVGPGVGFNTNIAWTGGVEPPMGDVEY
LTAFRTVVMPIANEFSPDVVLVSAGFDAVEGHQSPLGGYNVTAKCFGHLTKQLMKLAGGR
VVLALEGGHDLTAICDASESCVAALLGDELDPLPQAVLQQKPCPKAAASLERVIEIQSKH
WSSLQRLAPTVGQSLMDAQRREKDEADTVTAMASLTVDTEQAAASTVSTETSRSTEEPME
EEPVL
NT seq 3438 nt   +upstreamnt  +downstreamnt
atgcttttaaggcccacagtgccggggctgtgtgcaatgttgcagaccatctatgagacc
gagtcctgcttctcctcagacgccgtgtccagcagggcgcaacctctggagctgctgccc
cagtcccaagtgtctgacatgcccagtgctgctgtggaggtgaagacaactctcccctcg
gggatgcagagccctgtgggcggcagtgagcagggtgttggaggtggcggaggtcccgtg
gacctgaggacagatcccaggctgggacccctgggcggaggaggagtaggaggaggggtg
gacccagccatgagggagcagcaactgcagcatgaactgctcctcctcaagcagcagcag
gagcttcagaaacagcttctcttcgctgagttccagaagcagcatgaggtgctgacacgc
cagcatgaggttcagctgcaggagcacctgaaggcgtccctgcagcagcagcaggagatc
ctagcggccaagcggcagcaggagctggagcagaagaggaagctggagcagcagaggcat
gaggagctggagaaacagaggctggagcagcagctcctcatgctacgcaacaaagagaag
ggcaaagagagtgccattgccagtacagaggtgaagctgaagctccaggaattcctcctg
agcaaaaaagagcctggcacacctggcggactaaaccattccttcccccagaaatgctgg
ggggcccaccacacctctctggaccccaactcccctcctcagagtaacactccgggaacg
ccgccctcctacaaactacccccgctactggggtcctacgaggtcagggacgatttccct
ctccggaagactgcctctgagcccaatctgaaggtgcgttcgcggttaaaacagaaggta
gctgagaggcggagcagtcctctgctgaggaggaaggacgggacagtgataagcaccttc
aaaaagagagccatcgagatctctgtgtcctccatgtgcagcagtgcccctggctccggg
cccagctcgcccaacagctccaacagcgccatcgcagagaacggctccagcggctctgtc
cccaacatccatgcagagcagctgcggtccctccaccagacccttaacgccgatgggaca
gtcagtccgctgagcctctacacatccccctcgctgcccaacatctccctgggcctgcca
gccaactcgcacctcaccgccaatcagaagctgttgcaggaggcggagaggcaggccatc
cagaccatgcgtcagggtggggctctgacgggcaagtttgtcagcacctcgtccctgccg
gcatcatgcctgccacctgggatgcaacacgacttggactccacccaggcccccaacagc
cacagcagtcactcctccctactgcaacacgtcctcctgctggagcaggcccgccagcag
agtgccctcctctcagtccccatgtacggtcagtcgccgttggtgacgggggagcgggtg
tccaacagtatgcgcacggtgaacaagctaccacgccaccggcccctgagccgcacacag
tctgcacccctcccccagagcccccaggctctgcagcagctcgtcatgcagcagcagcac
cagcacttcctggagaagcagaagcagtaccagctcaacaagattctgtcaaaaggggtg
gagcttcctcgccaaccgcccacccaccccgaggagacggaggaggagctcacagagacg
caggagatgcaggaggaatgggcggggtctgagcgtctgggggaggggcgtcctcaggag
cagaggctccagaaggaagagtcaggggagacgtcgcccccttcagaacgcctgcttacc
cccctgaagggcgagagcacagagagcgacctggaggaagaggatgatgaagacgaggca
atcgagctgagggagtgtgatgaggagggcgtaccttacggccaacatcacctgcaacag
ctcaatgtgttccaggcgtccctgtccatttcgggcatgccccacagacctctgggaagg
gcccagtcctcccctgccactgccagcatcaagggggctcccatgggtgaggtccccatc
aagcacctcttcactacagggttggtgtacgacacctttatgctgaagcaccagtgtatg
tgtgggaacacccacatccacccagagcacgccggccgcatccagagtgtgtggtcccgg
ctgcaggagactgggctgctgggccgctgtgagaggattcgggggaggaaggccacgttg
gacgagatccagactgtgcattcagaataccacaccctgctgtacggcaccagtcccctc
aacagacagaaactagacagcaagaagctcttaggtccaatcagtcagaagatgtatgct
gtgttgccctgtggaggcattggggtggacagtgacactgtgtggaacgagatgcactcc
tcgggcgctgtccgaatggctgttggctgcgtcatcgagctggctttcaaagtggccgcc
ggggaactgaagaacggttttgccgtggtgcgtccaccaggccatcacgctgaggaatcc
actgccatgggcttttgcttcttcaactcagtggccatcacagccaagctgctacagcag
aaactaggagtgagcaagatcctcatcgtggactgggatattcaccatggtaacgggaca
cagcaggctttttacaacgaccccaacgtactttacatttccatgcatcgctacgacgat
ggaaacttcttccctggcagcggggctcctgaagaggtgggggttggacctggtgttggc
ttcaacacaaacatcgcttggacagggggcgtagaaccgcccatgggtgacgtggagtac
ctgactgccttcaggacggtggtgatgcctatagccaacgagttctcccctgacgtggtc
ctagtgtccgctgggtttgatgccgtggagggccaccagtcccctctgggaggatacaac
gtcactgctaaatgtttcggccacctcaccaagcagctgatgaagctggcggggggacgt
gtggtcctggcgctggaaggaggtcacgacctcacggccatctgtgatgcctccgagtcc
tgcgtggcggccctgctcggcgatgagttggaccccctgccacaggctgtcctgcaacag
aagccctgtccaaaagctgctgcctctctggagagggtcatcgagatacagagtaaacac
tggagctctctccaaaggttggctcccacggtgggccagtccttaatggatgcccagcgg
agagagaaggacgaggccgacacggtcactgccatggcatcgcttaccgtggatactgag
caggccgccgcttccaccgtctccacggagaccagcaggtctacagaagagccaatggaa
gaggagcctgtcttgtag

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