Salmo trutta (river trout): 115199801
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Entry
115199801 CDS
T08542
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03030
DNA replication
stru03410
Base excision repair
stru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115199801 (pole)
03410 Base excision repair
115199801 (pole)
03420 Nucleotide excision repair
115199801 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115199801 (pole)
03400 DNA repair and recombination proteins [BR:
stru03400
]
115199801 (pole)
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115199801 (pole)
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
115199801 (pole)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
115199801 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
115199801
NCBI-ProteinID:
XP_029618109
Ensembl:
ENSSTUG00000013062
LinkDB
All DBs
Position
9:complement(8507144..8531848)
Genome browser
AA seq
2293 aa
AA seq
DB search
MVLQNSGRYKSERGQGGDQDNQQDDRSSMSAAIRLERSQFTDEMDSRFGFERMKDPGEKT
GWLINMHPTEILDDDKRMVSAVDYYFIQEDGSRFKVPLPFKPYFYIATKKNCEREVISFL
SKKFQGKVAKLEMLPKEDLDLPNHLVGLKRSYVKLSFNTVDDLMKVKREISPAVRKNRER
EKSNDTYTSMLSSALAGGSVSAADEDGMSKKTSDQMDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGSAYPPEIILRSDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEAGLIQRWFEHVQETKPEIF
VTYNGDFFDWPFVETRAAHHGLNMYREIGFQKDNQGEYRASQAIHMDAFRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEESQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEETLRHAIEEEEKIPLEQVTNFNEV
CDEIKKKLISLKEVPNRIECPLIYHLDVAAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GANCQRKMSWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGRPRAFHELNLEEQARHE
KKRLGDYCRRAYKKVRQTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQESGDAALVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELVEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNNQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYDSVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRKLEDYGEQKSNTISTAKRLAEFLGDQMVKDAGLSCRYI
ISRKPEGTPVTERAIPLAIFQAEASVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHHA
LEAGQAADIEDFGMPARPLQPAILISTKRKRVSQGENSQAVESQEMELTQSWREILGPPP
PSGETQEARLVWLRYHKKKWELQLRQRKERRKRRRLQDGEVQAMGGGVIRDAGPATGLGS
FLRRTARSILDMPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQKVPKQEE
GATYRKVNRLLPRSNIVYYLYQYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRA
LVQLGCMCMVNKQLVRDLGGREAETYDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHK
ALFGLFIPSQRKASIFVLDTVRSNQMPNLNTLYGAERTALLEKTSEELLPPEKHTFEVRA
ENDVKAIHRALQRILLNYKGERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVHMVDEI
SYNVLDWQRHGARRMVRHYLNLDSCLSQAFDMARYYHLPVGNLPHDVSIFGSDLFLARHL
RKHNHLLWLSPTARPDLGGKEADDSRLVMEADDRGSMEINAQGCYSTVCVELDLQSLAVN
TILQSQHVNDMEGGASLGVSFDVIQQASLEEMMSGNQGASAVASYDETALCSNTFRILKS
MVVGWVREITRYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFK
RLGSTVVYGNFNRILLCTKKRRIDDAIGYVEYITNSIHSREIFHSLSISFSRCWEFLMWM
DLANYGGVKGKLPSSVLYGENGTAQKKGKEDGEEEGSEDEEEADEEEEDGAGEVDEVEEL
IESSWNIMQYLPQTASCQKYFLMIISAYIAAIYHSMREELRRNAPGATPIKRRGGSQTSQ
QAAGDSTALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVTQPSEMFPVLPGSHL
PLSNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPE
VICHQCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQTQYETESIEMALVEALQKKLMSYT
LQDLACAKCKGVKEANMPLYCTCAGDFELTFPTKSFSEQIKVFRNIAAHYNMNFLEETID
WLLVMSPQINQSR
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagtggacggtacaagtcagagagaggacaagggggtgaccaggac
aatcaacaggatgaccggtcatccatgtcggctgctatccggctggagcgcagccagttc
accgacgagatggactcccgcttcgggttcgagaggatgaaggacccaggagagaagact
ggctggctcatcaacatgcaccctacagaaattctggacgatgacaaacggatggtcagc
gctgtggactattatttcatccaggaagatggcagcaggttcaaggtacccctccccttt
aagccctatttctacatagccactaaaaagaactgtgagagagaagtcatctcattcttg
tccaagaagttccaagggaaggtggcgaagctggagatgctccctaaggaggacctggat
ctgcccaatcacctggtgggactaaagaggagctacgtcaagctttcattcaacactgtg
gatgacctcatgaaggtcaaacgggagatctcgccggcggtgcgcaagaaccgggagagg
gagaagtccaacgatacctacacctcaatgttatcaagtgcgttggcaggaggcagtgtc
tcggcagcagatgaagatggcatgtccaagaaaacctctgaccagatggacaacatagtg
gacatgagagagtacgacgtgccttaccacgtgcgcctgtccatcgaccttaagatccac
gtggctcactggtacaacgttcggtacaggggtagtgcataccctccagagatcatactg
agaagcgacctggtggaacgaccagacccagttgtgctggcctttgacatagagaccacc
aagcttcctctgaaattccctgatgcagaaacggaccagattatgatgatatcctacatg
atcgacggacagggctacctgatcacaaaccgagagattgtctctgaggacattgaggac
tttgagttcacccctaagccagagtacgagggacccttcactgtattcaatgagcctgac
gaggcgggtctcattcagcgatggttcgagcacgttcaagaaaccaagcccgaaatcttt
gtcacctacaacggagactttttcgattggccctttgtggagaccagggctgcccaccac
ggcctgaacatgtacagagagattggcttccagaaggacaaccagggcgagtacagggct
agccaggccatccacatggacgcctttaggtgggtaaagcgtgacagctacctgccggtg
ggcagtcacaacctgaaggcggcggccaaggccaagctgggctatgacccagtggagctg
gaccccgaggagatgtgccgcatggccacagaggagtcacagactctggccacttactct
gtgtcggatgccgtggccacgtattacctttacatgaagtacgtccaccccttcatcttt
gctctttgcaccatcatccctatggagccggatgaggtgctgcgtaagggttcggggacc
ctgtgtgaggcgctgctcatggtgcaggcctaccatgccaacatcgtcttccccaacaag
caggagcaggtgttcaacaagctgacagacgatggccacgtcatggactctgagacctac
gtggggggtcacgtggaggccctggagtccggcgtgttccgcagcgacatcccctgccgc
ttcaaaatgaatccggcggcattcgacttcctgcttcagcgggtggaggaaacgctgcgt
cacgccatcgaggaggaggagaagattcccctggagcaagtcaccaacttcaacgaggtg
tgtgacgagatcaagaagaagctcatctctttgaaggaggtccccaacaggatcgagtgt
cccctcatctaccatctggacgtggcggccatgtaccccaacatcatcctcaccaaccgc
ctgcagccctctgctatggttgacgaggccacgtgtgctgcctgcgatttcaacaagccg
ggggccaactgtcagaggaagatgagctggcaatggaggggggagatcatgccggccagc
cgcagtgagttccatcgcatccagcagcagctggaatcagagaagtttcctccgctcttc
cctaacggcaggccgcgggccttccatgagctcaacctggaggagcaggcccgccacgag
aagaaacgcctgggcgactactgcaggagggcctataagaaggtccgccagaccaagctg
gaggagcgggtcaccaccatctgccagagagagaactccttctacgtggacactgtgcga
gccttcagagaccgccgctacgagtttaagggactgcacaaggtgtggaagaagaaactg
tctgcagcccaggaaagtggtgacgctgccctggtgaagcgctgtaagaacatggagatc
ctctacgattctctccagctcgcccacaagtgcatcctcaactccttctatggctacgtc
atgaggaaaggggcccgctggtactccatggagatggctggcatagtgtgctacaccgga
gccaacatcatcacccaggccagagagctcgtggaacagatcgggaggcctctggagctg
gacactgatggcatctggtgcgtcctgcccaacaccttccccgagaactttgtggtgaag
acgagcaacgagaagaagcccaaggtgaccatctcctacccgggcgccatgctcaacatc
atggtgaaggaaggcttcaccaacaaccagtaccaggagctggtggaccctgcctcgctg
acctacgagacgcgggcggaaaacagcatcttcttcgaggtggacgggccctacctggcc
atgatcctgcccgcctccaaagaggagggaaagaaactgaagaaaaggtacgccgtgttc
aacgaggacggctctctggccgagctgaagggcttcgaggtgaagaggcgaggcgagctg
cagctcattaagatcttccagtcgtccgtgttcgaggccttcctcaaaggcaccactcta
gaggaggtctatgactcggtggccaaggtggccgactactggctcgacgtgctctacagc
aaggctgccaacatgccggacgcggagctgtttgagctcatctcggagaaccgctccatg
tcgcggaagctggaggactatggcgagcagaagtccaacaccatcagcacggccaagcgg
ctggccgagttcctgggtgaccagatggtgaaggacgccgggctgagctgccgctacatc
atctcccgcaagccagagggcacgccggtcacagagagggccatccccctggccatcttc
caagctgaagccagtgttaagaaacacttcctgcgcaagtggctgaagatgcccagcctc
cacgacctggacatccgctccatccttgactggagctactacattgagagattgggtagt
gccatccagaaaatcatcaccatcccagcagccctgcaacaggtgaagaaccccgtgccc
agagtgcgccacccggattggctccacaagaagctgctggagaagaacgacatctacaag
cagaagaagatcagcgagctgttcaccagcgagggcaagagacaggtggcccatcatgcc
ctggaggcagggcaggcggctgacattgaggactttgggatgcctgcccgacccttgcag
ccggccatactgatcagcacgaagcgcaagcgggtgtcgcaaggagagaacagccaggcc
gtggagtcccaggagatggagctcacccagtcctggcgggagatcctcggcccgccacca
ccctcgggggaaacacaggaggcgcgcctggtgtggctgcgctaccacaagaagaagtgg
gagctgcagctgcggcagaggaaggagcgccggaagcgccggcgcctgcaggacggcgag
gtccaggccatggggggaggggtgatccgggacgcgggtcccgccacaggcctgggtagc
ttcctccgccgcacggcgcgcagtatcctggacatgccctggcagatcgtacagattgca
gagaccagtcaccctgggctgtataagctgtgggctgtgattggcagtgacctgcactgc
atgaagctcaacatcccacgggtgttctacgtcaaccagaaggtccccaagcaggaggag
ggagccacatacaggaaggtgaaccgtcttctgccgcgctccaacatcgtctactacctg
taccagtactctgtccctgaggacatgtaccaggagcacatcaacgagatcaacgctgac
ctctctgccccagacatagagggggtctacgagacacaggtccctctgctgttccgggcc
ctggtacagctgggctgtatgtgcatggtcaacaagcagttggtccgggacctgggcggc
cgggaggctgagacgtacgacctggagcacctggagatgaggtccctggcccagttcagc
tacctggagcctgggagcgtccgacacatctacctttaccaccacagccagggccacaaa
gccctgttcggcctgttcatcccctcacagcgcaaggccagcatctttgtcctggacacg
gttcgcagtaaccagatgcccaacctgaacaccctgtatggggcagagcgtacagccctg
ctggagaagaccagcgaagagctcctgccccctgagaaacacacctttgaggtgcgggca
gagaacgacgtgaaggccatccaccgagccctgcagcgcatactgctcaactacaagggg
gagcgccgcgggcccaccctgatcgcagtgcagtccaactgggagctgcggcggctggcg
gcgggcatgccggtgctggaggagttcccggtggtgccggtgcatatggtggacgagatc
agctacaacgtgctggactggcagcgccacggtgcccgccgcatggtccgccactacctc
aacctggacagctgcctgtcgcaggcttttgacatggccagatactaccacttgccggtg
gggaacctgccccacgacgtgtccatctttggttctgacctgttcctggccaggcacctg
aggaagcacaaccacctgctgtggctgtcccccaccgccaggcctgacctggggggcaag
gaggccgacgacagcaggctggtgatggaggctgacgacaggggctccatggagatcaac
gctcagggctgctactcaacagtgtgtgtggagctggacctgcagagtttggctgtgaac
accatcctgcagtcgcagcatgtcaacgacatggagggaggagccagcctgggcgtcagc
tttgacgtcatccagcaggcctcgctggaggaaatgatgtcggggaaccagggagccagt
gccgtggccagctacgacgagaccgccctctgctccaacaccttcaggatcctgaagagc
atggtggttggctgggtgcgggagatcacgcggtaccacaacgtctacgccgacaaccag
gtgatgcacttctaccgctggctgcgctcgcccagctcgctgctttacgacccggcgctg
caccgcaccctacacaacatgatgaagaaggtattcctccagctggtggcagagttcaag
cggctgggctccaccgtggtgtacgggaactttaaccgcatcctcctttgcactaagaag
cggaggattgacgacgccatcggctacgtggagtacatcaccaacagcattcactcgcgg
gaaatcttccactccctctccatctctttctcccgctgctgggagttccttatgtggatg
gatctggccaactatggaggagtgaagggcaaactgccctccagcgtcctgtatggagag
aacgggacagcccagaagaagggaaaggaggatggcgaggaggagggcagcgaggacgag
gaggaagctgacgaggaggaggaggatggagccggagaagtggatgaggtggaggagctg
atcgaaagcagctggaacatcatgcagtatctgcctcagaccgcctcctgtcagaaatac
ttcctcatgatcatctccgcctatattgctgccatctaccacagcatgcgggaggagcta
agacgcaatgccccgggagccacgcccattaagaggcggggcggaagccagacttcccag
caggcagccggagattccacagcacttcccggtatgatctccttctctcaagagtatgtg
tccagcgagctgacccagaacttcttcaccatcacccagaagatccaaaagaaggtgacg
ggcacccggagcgtgacccagccctcggaaatgttccctgtcctgcctggctcccacctg
cctctcagcaacccagctctggaatttatcaaatacgtctgccaggtcctctccctggat
gccaacatagtgaaccaggtgaacaagctgaagagggacctgctgcgtctggtagacgtt
ggtgagttctcggaggaagcccagttccgcgacccctgcaactcttacatcctgcccgag
gtcatctgccaccaatgcaacttctgccgcgacctcgatctttgcaaggacccctcggtg
gcacaggacggctctgttttgccccagtggttctgctccaactgccagacccagtatgag
actgagtccattgagatggccctggtggaggccttgcagaagaaactgatgagctacact
ctgcaggacctggcgtgtgccaagtgtaaaggagtgaaggaggccaacatgcctctttac
tgcacttgtgcaggagactttgaactcaccttccccaccaagagtttctcagagcagatc
aaagtgttccggaacatcgccgcacactacaacatgaacttcctggaagagaccattgac
tggctactggtcatgagtccacaaataaaccagtctagatga
DBGET
integrated database retrieval system
