Salmo trutta (river trout): 115199815
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Entry
115199815 CDS
T08542
Name
(RefSeq) sodium-dependent serotonin transporter-like isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115199815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115199815
Transporters [BR:
stru02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115199815
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Motif
Pfam:
SNF
NADH_dh_m_C1
Motif
Other DBs
NCBI-GeneID:
115199815
NCBI-ProteinID:
XP_029618134
Ensembl:
ENSSTUG00000035225
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Position
9:complement(9083789..9102092)
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AA seq
522 aa
AA seq
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MDFLLSVIGFAVDLGNVWRFPYICYQNGGGAFLIPYIVMAIFGGVPLFYMELALGQFHRT
GAISIWKHICPIFKGIGYAICVIALYVSFYYNTIIAWALFYFYSSFASVLPWTNCDNAWN
TENCTNYFLKDNVTWNNYSRSPAEEFYTRNVLEIHKSDGLRNVGGVRWQLMLCLFLIFTI
VYFSLWKGVKTSGKVVWVTATLPYVVLFILLIRGATLPGAWKGVVFYLKPKWEKLFETSV
WVDAAAQIFFSLGPGFGVLLALSSYNPFTNNCYRDAIVTSLVNCLTSFMSGFVIFTVLGY
MAEKRNVNVEDVARDKGPSLLFITYPEAIANMTGSTFFAIIFFVMMITLGLDSTFGGLEA
IITAVMDEYPDYLANRRELFVLGLVVVCFLGSLSTLTNGGAYVVKLLEEFGVGSSIIAVG
FLEAIAVSWFYGITRFSNDIKSMLGYSPGLFWKVCWVAISPAFLAYIIVSSLLKPPPLQL
FDYKYPDWSITVGYVIGASSFMWIPIYMVYKLVWTPGSLKQV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggattttcttttatcggtcattggcttcgcggtagacttaggaaacgtttggcgattt
ccatacatttgttaccaaaatggaggcggggctttcctcatcccctacattgtcatggcc
atctttggaggggtgccactattttacatggaactggccctgggacagttccacagaact
ggcgccatatccatatggaaacacatatgccccatcttcaaaggcattgggtatgcgatc
tgtgtcatcgcgctgtacgtctccttctactacaacaccatcatcgcctgggcacttttc
tacttctactcgtccttcgccagcgtcctgccctggacaaactgtgacaatgcctggaac
actgaaaactgcaccaactacttcctgaaagacaacgtgacctggaacaactactccagg
tcacctgctgaggaattttacacgaggaacgtcctggagatccacaagtctgatgggctg
cgtaacgtggggggtgttcgctggcagctgatgctctgcctctttctcatcttcactatc
gtttacttcagtctctggaagggagtgaagacatcagggaaggtagtgtgggtgacggcc
accttgccatatgtggtgctcttcatcctgttgatccgcggtgccaccctaccaggtgca
tggaagggagtggtcttctacctaaagccaaaatgggagaaactcttcgagaccagtgtg
tgggtagatgctgcggctcagatcttcttctccttggggccaggctttggggtgctcctc
gccctctccagctacaacccgttcacaaacaactgttatcgtgacgccatagtgaccagc
ctggtgaactgcctgaccagcttcatgtctggttttgtgatcttcactgtgctggggtac
atggcagagaagagaaatgtgaatgtggaggatgtagccagagacaaaggtccaagccta
ctcttcatcacctatccagaggccatagccaacatgacagggtcaacattcttcgccatc
atcttcttcgtgatgatgatcactcttgggctcgacagcacgtttggaggactggaggct
atcattactgctgtgatggatgaataccctgattacctggcgaacagacgggagctgttt
gtactgggcttggttgttgtgtgctttttgggctccctcagcacccttaccaatggcggg
gcctatgtggtgaaactgctggaggaatttggggtgggttcctccatcattgctgttggt
tttcttgaggccatcgccgtttcctggttctatggtatcacgagattcagcaatgacatt
aaatccatgttaggctattctcctggattattctggaaggtgtgctgggtggccatcagt
cctgcatttctagcgtatataatagtgagctccctgcttaagccaccccccctccaactc
tttgactacaagtacccagactggagcatcacggtgggctacgtcatcggggcctcctcc
tttatgtggatccctatttatatggtctacaaactggtgtggacccccggatcactgaaa
caggtctga
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