Salmo trutta (river trout): 115199932
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Entry
115199932 CDS
T08542
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-A-like isoform X1
KO
K08561
germ cell nuclear factor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115199932
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115199932
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
115199932
Nuclear receptors [BR:
stru03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
115199932
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115199932
NCBI-ProteinID:
XP_029618350
Ensembl:
ENSSTUG00000023380
UniProt:
A0A674AAI2
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Position
9:complement(13499087..13606439)
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AA seq
499 aa
AA seq
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MEIEKRTNGFDYPERNNAKSVNGFYGDHPLEAEPNNGIDGMNDSNLDVAADPRVCLICGD
RATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMGM
NRKAIREDGMPGGRNKSIGPVQITDEEIERIMSGQEFKEEASLPEHTWSNNGDSSDHSSP
SNGASEGNQPSPASTLSSNRSVELNGGYTAALRDQYMNTPMNTPYQLLPHLFSYHAQSGL
LPPQPRSLYPQSHPLVLQLVAAEDLAPLATPMLIEDGYKVTQVELFALLCRLADELLFRQ
ISWIKKLPFFCELSIEDYTCLLSSTWQELILLSCLTIYSAQIFGDLADVTAKYTPSEGEM
QGFSENGMEVMERLIYLFRKFHQLKVSNEEYACMKAINFLNQDIRGLTNVSQLEQLNKRY
WYVCQDYTEYKYPHQPKRFPEIMMCLPEIRFMAGKLVNVPLEQLPLLFKAVLHSCKSSLI
SYRTGSSPCLTSTGTSPGN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggagatagagaagaggacgaatggtttcgattacccagagagaaacaatgcgaagtcc
gttaacggcttctacggtgaccatcccttggaagctgaaccaaataatgggatagatgga
atgaatgacagtaatcttgatgttgcagctgacccacgtgtttgccttatctgtggagac
cgcgccacaggcctgcactacggcatcatctcctgcgagggctgcaagggcttcttcaag
cgcagcatctgcaacaagcgcgtgtaccgctgcagccgcgacaagaactgcgagatgtca
cgcaagcagcgcaaccgctgtcaatactgccgcctgctcaagtgtctacagatgggaatg
aaccgcaaagcaatcagggaagatggcatgccaggagggagaaacaaaagcattgggcct
gtccagatcacagatgaggagattgagcggatcatgtcgggacaggagtttaaggaggaa
gccagtctcccggagcacacctggagcaacaatggtgacagtagtgaccacagttcccct
agcaacggcgcctccgagggcaaccagccatcacccgcatccactctgtcatccaatcgc
tctgtggagttgaatggcggctacacggctgctctcagggaccagtacatgaacaccccc
atgaacaccccctaccagctgctacctcacctcttcagctaccatgcccagtcaggcctg
cttcctccccagccccgcagcctctacccccagtcacaccccctggtgctgcagctagtg
gctgcagaggacctggctccactggccacccccatgctgatagaggatgggtacaaggtg
actcaggtggagttgtttgcgctgctgtgtcgtctggccgacgagctgctgtttcgtcag
atctcgtggatcaagaagctgccgttcttctgcgagctgtccatcgaggactacacctgt
ctgctcagctccacctggcaggagctcatcctgctctcctgcctcaccatctacagtgcg
cagatctttggagacctggccgacgtcaccgccaagtacacgccctctgagggcgagatg
caggggttcagtgagaatggcatggaggtgatggagaggctgatctatctgttccgcaag
ttccaccagttgaaggtcagcaacgaggagtacgcctgcatgaaagccatcaacttcttg
aaccaagatatccgcggtctgactaacgtctcccagttggagcagctgaacaagcgctac
tggtacgtgtgtcaggactacactgagtacaagtaccctcaccagcccaaacgcttccct
gagatcatgatgtgtctgccagagatccgcttcatggcaggcaagctggtgaatgttccc
ctggaacagctcccccttttgttcaaagcagtcttgcactcctgcaaatccagcctaatc
agctacaggacaggaagttccccctgtctgacttctacgggtacctcccctgggaactga
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