Salmo trutta (river trout): 115199951
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Entry
115199951 CDS
T08542
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115199951 (gle1)
03015 mRNA surveillance pathway
115199951 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115199951 (gle1)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115199951 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
115199951
NCBI-ProteinID:
XP_029618383
Ensembl:
ENSSTUG00000006383
UniProt:
A0A673X233
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All DBs
Position
9:13936279..13943398
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AA seq
723 aa
AA seq
DB search
MPAESLRWDTLEALKNSPKGRLKYNPDWLEKGEDILSGCNEAPSLSPLSGLILKRLNMSP
RALQKTCSLGSASRDPSPGLSEEAPVSSTSPFASANAQPTPLSSPLLVPRLKKDTEQQIV
GDEDSAPDASDDLSPATNPIPPPTISLLSPRATQMEGCIRICEEKHRAKAKMELSLRQEL
QEKLVASVASRESEQLKRFEELMELKQRQEDQSMRDMMDRETQESIGRQEKLKEEHKNRI
KILNLRLREAEQQRLREVEFERQRQVEGRERLRALNAIQEEILQLNQLLEPAAPTQSGPS
PDLTSYSTRANQLCSQVSEVVRMTAEGEFPSVEDMTVAERALHEMRSLIRVMQEAAAQAQ
EKRKKEQEEEEKRRKMAMLQAQQEEQKKSAALSAKEKARKKGLQTKAEQSTLKWYRELQD
SANQCAQSFEGLNNTKDIQTKKLRMELQKAATIPVSQISSISGSKLREIFDKIDKLLSGR
SVVSGGKSVSTSQHPNGLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPK
VGDLILAHLHKKCPYAVPHYPPMKDGTSVEEYQKILGYRVEDGGVEAQDSFLKRMSGMIR
LYAAIIQLRWPYGSKQGPDPHGLNNGWRWLAQMLNMEPLADVTATLLFDFLEVCGNALMK
QYQVQFWKLILLIQEEYLPRIEAVTSQGQAGSVTRLKQFLESSLRSRQIPPPKGQLSSHF
WRS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaaagtttacgatgggatacgttggaggccttgaaaaactcaccaaaggga
agactgaaatacaacccagactggctcgaaaagggggaggatattttgtcaggttgtaat
gaagctcctagcttgtccccactctctgggctcatcttgaagaggcttaacatgagccct
cgagcgcttcagaagacctgctctttgggctctgcttctcgtgacccaagtccaggcctg
tctgaggaagccccagtctcctcaaccagccccttcgcttcagccaatgctcagcccact
cccctctcttctccactactggtccccaggttgaagaaagacacagagcagcagattgtt
ggtgatgaggacagtgccccagatgccagcgacgatctcagtccagccaccaaccccatt
cctccccccaccatctcccttctgtctcccagggcaactcaaatggaaggatgtatacgc
atttgtgaggagaaacatcgtgccaaagctaagatggagctgagtctgaggcaggagctg
caggagaagctggtggcctcagttgcgagccgtgagtcggagcagctcaaacgctttgag
gagttgatggagctgaagcagagacaggaggaccagagtatgagggacatgatggacaga
gaaacacaagaaagcattgggcgccaagaaaagttgaaagaagagcacaaaaacagaata
aagatcctgaacctgcgcctgcgggaagcggagcaacagcgtttgcgggaggtggaattt
gagaggcagagacaggtggagggtagggagagactgcgtgctctcaacgccatccaggaa
gagatacttcaactcaatcagctcctggagccggccgcacccacccagtcaggcccctcc
cctgatcttacatcctatagcacccgtgccaaccagctatgctcccaggtgtcagaggtg
gtgcgcatgacagcggagggggagttccccagtgtggaggacatgacggtggcggagcgg
gcactgcatgagatgaggtcactgatccgggtgatgcaggaggcggctgcccaggcccag
gagaagaggaagaaggagcaggaggaggaagagaagcgcaggaagatggcaatgctgcag
gcccagcaggaagagcagaagaagagtgcagctctgtcagctaaagagaaggcacggaaa
aagggcctgcagactaaagctgagcagagcactctgaagtggtaccgagagctgcaggac
tccgctaaccagtgtgcacagtcttttgaaggcttgaacaacactaaggatatccagaca
aagaaactaaggatggagctccagaaggcagccacaatccctgtcagccagatctccagt
atctcaggttccaagctcagggaaatatttgacaagattgacaagctgttgtctgggaga
tcagtggtatccggagggaagtctgtctccacctcccagcatcccaacggcctggacttt
gtcagctacaaactggccgagaagtttgtgaaacaaggagaagaggaggtggcgtcccac
cacgaggcagccttccccatcgctgtggtggcctcaggggtgtgggagcttcatcccaaa
gtcggagacctcatcctcgcccaccttcataagaaatgcccctacgccgtgccccactac
ccacctatgaaggatggcacgtctgtagaggaatatcagaaaatcttaggctaccgtgtg
gaagatggaggggtggaggctcaggacagctttttgaagaggatgtcaggaatgatccgc
ctctatgctgctatcattcagctcagatggccttatggctccaagcaggggcctgaccca
catgggctgaacaatggctggcgctggctggctcagatgctgaacatggagcccctggca
gacgtcacggcaacactcctttttgacttcctagaggtctgtggcaacgccctgatgaag
cagtatcaggttcagttttggaagctcattctgctcatccaagaggaatacttgccaagg
attgaagctgtcacaagccaaggccaggcgggctcagtcacgaggctcaagcagttcctg
gagagttcattaagaagcaggcagatccctccccccaaaggccagctgagctcccacttc
tggagatcctga
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