Salmo trutta (river trout): 115199966
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Entry
115199966 CDS
T08542
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115199966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115199966
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115199966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
DNA_pol_phi
BUD22
CobT
Nop14
Motif
Other DBs
NCBI-GeneID:
115199966
NCBI-ProteinID:
XP_029618421
Ensembl:
ENSSTUG00000026304
LinkDB
All DBs
Position
1:complement(53346578..53351881)
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AA seq
564 aa
AA seq
DB search
MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRSVQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNL
SFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGEEGCDALREVMDGLNMGDLLGSLSDD
EGEPEDDDEDDEEEEDDYEEDDDVEEEDSSVNQVSSPPSVPRPPDAASFLCFPSPDKLLK
LGTKRALLFEQQVDVADAGKTAEAFLKISSVYNEEDEDVKSAVLDSIDAILRKAFASPSF
QGYNFVSSLLVMLGLLKSEDKVKPVRVVPGHLQALEYVVRQDYFPQDHIAVLEAFMSRHI
QALESCSSARNILKSTLEQVRPEN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatgctgttgcccagttggccgactctctggccaaaactcaggtgactgag
ggagagttgagttataaaggccaaggacgcaaattcgacaatgcacaatctgtggaagag
atggtgaaagagatccaggagttcaaggggttgcaagcgctcaggctggaggggaacact
tatggagtggaggcagcacaggccatcgctaaagccctggagacaaagagtgaatttaag
tactgttactggagtgacatgtttactgggcgactgcgttctgagatccctccagccctg
aactccctgggtgcggccctgatgacagcaggcgccagactgactgtgctggacctcagt
gacaacgcctttggaccagacggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcattggtggaggcaag
atcttagctgcagcgttgacggagtgctataagcagtccagtgcacagggcacccccctc
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctc
gcccaggccttccagctgatgggtagtctggaggaggtgcacgtgccccagaatgggatc
aaccaccctggagtgactgctctggccactgccatgcaacacaacccccaactccgggtc
ctcaacctcaacgacaacaccttcactaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgaagtgtccaggtgataaactttggagactgtctggtgcgttccgagggt
gctatagccatcgccgaggcagttactgagggccttcccatcctcaaggagctgaatctg
tcattcggggagatcacaggagaagctgcactgctggtggcacaatcagtcgagggcaaa
gccacactggagaaactagacctaaatggtaactgcctgggggaagagggctgtgatgct
ctcagagaggtaatggatggcctgaacatgggagacctgctgggatcactcagcgacgat
gaaggggagccggaggatgatgatgaggatgatgaggaggaagaggatgactatgaggag
gatgatgatgtggaggaagaagacagcagtgtgaatcaggtttcctcccctccgtcagtg
ccccgacccccagatgccgcctccttcctctgcttcccatcccccgacaagctgctcaaa
ctgggcaccaagagggccctgctcttcgaacagcaggtagatgtggctgatgctggtaag
acagcggaggctttcctgaaaatctcctctgtgtacaatgaggaagatgaagatgttaag
agtgctgtcctagacagtattgatgcaattctcaggaaagccttcgcaagcccctccttc
caaggttacaactttgtatcatcgctgttagtaatgctgggactcctcaagagtgaggac
aaggtgaagccggtacgtgtggtacctggtcatttgcaggccctggagtacgttgtgcgt
caggactacttcccccaggaccacatcgccgtgctggaggccttcatgtcccgacacatc
caggcccttgagtcgtgcagcagcgccaggaacatcctcaagtccacgctggagcaggtc
aggcctgaaaactga
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