Salmo trutta (river trout): 115200026
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Entry
115200026 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115200026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115200026
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115200026
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115200026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
WWE_5
zf-rbx1
zf-C3HC4
zf-RING_2
zf-ANAPC11
zf-RING_5
zf-RING_Vps41
zf_RING_Vps8
PHD_NSD
zf-UDP
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
115200026
NCBI-ProteinID:
XP_029618536
Ensembl:
ENSSTUG00000016674
LinkDB
All DBs
Position
9:complement(15363284..15424095)
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AA seq
653 aa
AA seq
DB search
MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYSAATCHHIENVLKGDVRGTV
VLGQVDTQLASYIIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMIQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLYGGAAGAPGATGTL
NVVRQSNTFAGTTLWSPTSGDGSNNIQHNNISAGSGQAKAEQVQSPLSSSNFPCSPALPS
LPLAHGHSHTHAHSHGHHVIINGQNNLNRPGTQRISMGTARGAIPPGVPALPVKNLTGSG
PVHPAIAGMTGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHLR
KGKNPEDVVRRYTEKVKVAPDEDCTICMERLVMSSGYEGVLQHKGIKPEMVGKLGKCGHI
YHLLCLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMDYHVIPHCLPGYLEAKTIRI
VYDIPAGIQATEHPNPGKKFSARGFPRHCYLPDNDKGRKVLKLLIMAWDRRLIFTIDTSS
TTGESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVVEDNLKD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcccaggctctggggtgctggtgtcggtcaacgggctggggtaccctcctcag
aacctggcccgggtggtggtgtgggagtggctgaacgaacatgggcgctggcggccctac
agcgcggcaacgtgccaccacatagagaacgtactgaagggagacgtgcgggggactgtg
gtccttggacaggtggatacccaactggcctcttacatcatcgacctgcagtccatgcac
cagtttagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtcg
tcggccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggtttctgctacctcattgacttcaacagcatgatccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctggcctaccctctcatc
atgggctccatccccaagtcccagtcgtggcctgtgggcgccagctccggccaaccctgc
tcctgccagcagtgcattctagtcaacagcacgcgggccgcctccaacgccatcctggcc
tctcagcgccgtaagctgtacggaggggccgcaggagctccaggggccacaggcacgctc
aatgtggtacggcagagtaacactttcgccggaaccacactctggtccccaacctccggt
gacgggagcaacaacatacagcataacaacataagtgcaggaagtggccaagctaaagct
gaacaggtgcagtcacctctgtctagttccaacttcccttgttccccggcactgccgtcc
ctaccgctcgcacatggccactcccacacccatgcacactcccacggccaccatgtcatc
atcaacgggcagaacaacctgaaccggccgggcacccagcgcatttccatgggcactgct
agaggagccatcccaccaggggtcccggccctccctgttaagaacttgacaggctctgga
ccagttcacccagcaattgcaggtatgacaggtatcctaatgtgtgctgctggcctgccc
gtgtgtctgacccgggcccctaaacccatcctgcacccgccgcccataaacaagagtgac
atgaagcctgtgcccggggtcaatggcatccgccgcaagaccaagaagaagcacctcagg
aaagggaaaaacccagaggatgtggtgcggagatacacggagaaagtgaaggtagcccct
gatgaggactgcaccatctgcatggagaggctggtgatgtcatcgggctacgagggtgtc
ctgcagcacaagggcataaagccagaaatggtgggcaagcttggcaagtgtgggcacatt
taccatctgctgtgcctggtggccatgtacaacaatggcaacaaggatggcagtctgcag
tgccccacctgtaaggctatctatggggagaagacaggcacacagccccctgggaagatg
gactaccatgtcatcccccactgcctgcctggctacctggaagccaagaccatccgcatc
gtctatgacattcctgctggcatacaggccacagagcatcccaacccagggaagaagttc
agcgcaagaggcttcccacggcactgctacctcccagacaatgacaagggcaggaaggtc
ctgaaactcctgatcatggcctgggaccgccgcctcatcttcaccatcgacacgtccagc
accacgggagagtcagacacggtggtgtggaacgagatccaccacaagacagagtttggc
tccaacctgacgggacacggctacccagaccccaactacctggacaacgtcctgacagag
ctgtcagcccagggggtcgtagaggacaacctgaaggactga
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integrated database retrieval system
