Salmo trutta (river trout): 115200062
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Entry
115200062 CDS
T08542
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115200062
Membrane trafficking [BR:
stru04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115200062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
115200062
NCBI-ProteinID:
XP_029618615
Ensembl:
ENSSTUG00000003193
LinkDB
All DBs
Position
9:complement(17607393..17646699)
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AA seq
1475 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNGDVLKTAERLYRAAWITKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFLDGYKTLGFQESIYGEFLGRVRENPRLLASCLVAGERL
NQEHTQGVIYTVFTSLYGNCIMQEDERYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERFTPAQQERLFGEKGS
EGYRQKVAAAVEANEAKLVTLVNKFIGYLKQNTYCFPHNLRWIVSQMYKTLSCVERLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDGDP
RRKNSLAKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTVAYMTHSQLLCLVDFV
RSVMAGDHLREEEHMLLETMLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRNIG
QQLATSWDSTTTTLSAHIPLVTPFAASRSRSRSELAQQGEAEASSLESLQEVMPEEVLVI
SLGSSQQTIPGMMSENEVLTMQLTDGSQGDTPADDTKHHGKPDKTLRFSLCSDNLEGISE
GPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEHATTQDNLDDKLRKFEIRD
MMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGATVENMLGSLLCLPGSSSV
LLDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTEIREVSS
RPSTPGLSVISATSEDRGKTEDLRSECSSDFGGKDSVTSPDGEESSHGAHHSLSSPASQA
DSLLAMFDPLSSGEGFSTGTIVRPKVHYARPLHPPPDPPIPEACALGQEPRYSLFTPHCL
VQAELEHTKQRHSYPDRLVRSRSSDIVCQGRRPTSDPGLNRRAAAEERDPAGHFSMGPSS
SPSKDSLKGEVEERKDSDEEKSDRNRPWWKKRFQSAIPKVLYWTAESEVPAPIAFRKRDR
QEKDDVGHERVPQDDTLSRNSQAQAAEDILDKYRNIKRTSPSEGATAAAYDTTGELCGEE
GLHDEALQNMSTDDLPDSASQTAQQHDSSKFSFSDAKKKLRLALCSADSVAFPLMAPATT
RNGLPDHTDSEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSRFDARTCRKLLAAI
AEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMEA
KSLDFIKAFQGCTASDDKTAAVEDFLRYLYGAMAHDAIWQYASEDQLQDAQMAIERSVMN
RIFKLAFYPNQDGDILRDQLLQEHIARLSKVVTANHKALQIPEVYAREAPWPSAQSEIRT
ISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTIQ
YINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtatgtg
gcttcagagaagcagctgatccagcggctcaacggggacgtgctgaagactgctgagagg
ctgtaccgtgctgcctggatcaccaaacagcagaggatcaacctcgaccggctcatcctc
accagtgctgaggcctccccggctgaatgctgccagcatgccaaagtgctggaggacacg
cagttcctggacggctacaagactctgggctttcaggagagcatctatggggagttcctg
ggtcgggtgcgcgagaaccctcggctgttggcctcctgcctggtggctggggagaggctg
aaccaggagcacacacagggggtcatttacaccgtcttcacctcactctacggcaactgt
atcatgcaggaggatgagcgctacctgctgcaggtcctccgctacttggtggagtttgag
ctgaaggagagcgacaaccctcggcggctgctgcggcggggcacgtgcgccttcagcatc
ctcttcaagctcttctccgaggggctgtactcggccaagcttttcctcaccgccaccctc
cacgagcccatcatgcagctgctggtggaggacgaggaccacctggagacggacccctcc
aaagtgacggagcgcttcacgccggcccagcaggagcgcctgtttggggagaagggctcg
gagggctacaggcagaaggtggcggccgccgtggaagccaacgaggccaagctggtgacc
ctggtcaacaagttcatcggctacctgaagcagaatacctactgcttcccccacaacctg
cgctggatagtgtctcagatgtacaagacgctgtcgtgcgtagaacgactggaggtggga
gaggtgcggaccatgtgcacggacctgctgctcacctgcttcatctgcccagcgatagtc
aaccctgagcagtacggcatcatctcagacgcccctatcaacgaggtggctcgcttcaac
ctcatgcaggtagggcagcttcttcaacagttggcaatggctgacgatgatggagacccc
cggaggaaaaacagtttggccaagtttgataagagctgtgtagctgccttcttggatgtg
gtaatcggagggagagctgtggagacaccgcccatgtcctccatgaacctactagaagga
ctcagcaggactgtggcgtacatgacacacagtcagctcctctgcctggtggactttgta
cggagtgtgatggcaggggaccacctccgggaggaggagcacatgctcctggagaccatg
ctggccaacgtgccccagtcccgtacggtgaagagcaacagtctggagctcaccccctcc
aacaccccccagctctccccagccaccacccccgccaacaaaaaaaacaggaacatagga
caacagttagcaacttcctgggactccacaaccaccaccctgtctgctcacattccatta
gttaccccttttgcagcctcccgcagtcgtagccgttccgagctggcccagcagggggag
gcagaggctagttctctggagtccctgcaggaggttatgccagaggaggtgctggtgatc
tcactaggaagcagccagcagaccatccctgggatgatgtcagagaatgaggtgttgacc
atgcagctgactgatgggtcacaaggggacactcctgcagatgacaccaagcaccatggc
aagccagacaaaaccctgcgcttctccctctgcagtgacaacctggagggcatctcagag
ggcccgtccaaccggtctaactcggtgtcgtctctggacctggagggagagtctgtgtct
gagctgggagctgggccatcagggagcaatggggtggaggctctacaactactggagcat
gagcatgccaccactcaggacaacctggatgacaaactgcgtaagtttgagatccgcgac
atgatgggcctgacagatgaccgggacatctctgagacagtgagtgagacctggagcaca
gacgtgctgggcagcgactttgaccccaacatggatgaggatcgactgcaggaaatagct
ggggcgactgtagagaacatgctgggcagcctgctgtgcctaccaggctccagctcagtg
ctgctagacccttatggatccaccatctcagagaccaccagcgaggcctggagtgtggag
gtcctgcccagcgactcagaagccccagacctgaagcaggaagagcgtctacaggagttg
gagagctgctcagggctgggcagcacctccgatgacacagagatcagagaggtcagctcc
cggcccagcaccccagggctcagcgtcatctcagcgacatcagaagatagaggcaagacg
gaggacctgcggtcggagtgcagctcggactttggggggaaggactctgtcaccagtcca
gatggggaggagtcgtctcatggagcacaccacagtttgtcttctccggcctcgcaggca
gactccttactggccatgttcgatcccctatcctccggggaaggtttctctactggtacc
atcgtgaggcccaaagtgcactacgccaggccccttcatcctccccctgaccctcccatc
ccagaggcctgtgccctgggccaggagccccgctactccctgttcacgccccactgcctg
gtccaagctgagctggagcacaccaagcagcgccactcctacccagacaggctggtacgc
agccgcagctctgacattgtctgccaaggccgccggcctaccagcgacccgggcctcaac
cgcagagcggcagctgaggagcgggaccctgccgggcacttctccatggggccgtcctcg
tcccccagcaaggattccctaaaaggagaggttgaggagagaaaggacagtgatgaggaa
aagtctgatcgtaatagaccatggtggaagaaacgctttcagtcagccattcccaaagtg
ctgtattggacggctgagagtgaagtcccagctccgatagccttccggaaaagggacagg
caggagaaagatgatgtgggccatgaacgcgtcccacaagacgacactctgtccaggaac
tcccaggcccaggcagcagaagacatcctggacaagtacaggaacatcaagaggaccagc
cccagtgaaggagccaccgctgcagcctatgacaccacaggagagctatgtggagaggag
ggtttgcacgacgaagctctgcagaacatgtccacagacgacctgccagactcagccagc
cagacagcccagcaacacgactccagcaagttctcattcagtgatgcaaagaagaagttg
agactggccttgtgttcagcagactctgtggctttccccctcatggctcctgccaccaca
cgcaatgggctgcctgaccacacggactctgaagacaatgagatcgtgtgcttcctgaag
gtccagctggcggaggccatcaacctgcaggataagaaccagatggcccagatccaggag
accactcgctgcgtcagccgcttcgacgcacgtacctgcaggaagctgctggcagccatc
gccgaggattacaggaagcgggcgccctacatagcgtatctgacgcggtgtcggcaaggc
ctgcagacgtcccaggcccacctggagcggctgctgcagcgggtgctgagggacaaggag
gtggctaaccgctacttcaccacagtctgtgttcgtctcctactggaacacatggaggcg
aagtccctggacttcatcaaagccttccaggggtgcacagcatcagacgacaagacggcg
gcggtggaggacttcctgcgctacctgtatggggccatggcccatgatgccatctggcag
tacgccagcgaggaccagctgcaggatgcccagatggccatagagcgcagcgtcatgaac
cgcatcttcaagctggccttctaccccaaccaggatggggacatcctgagagaccagctt
cttcaggaacacatagcgcgtctctcaaaagtggtgacagcaaatcacaaagctcttcaa
atcccagaggtgtatgcgagggaggctccctggccgtctgcccagtcggagatccggacc
atcagtgcctacaagactcctcgggacaaagtgcagtgtatactgcgcatgtgttccacc
atcatgaacctcctgagtctggccaacgaggactctgtccctggagctgacgacttcgtc
cctgtgctcgtctttgtcctgataaaggcaaacccgccctgcctgctgtccactattcag
tacatcaataatttctacgccagccggctgagtggggaggagtgctattggtggatgcag
ttcaccgcggcagtggaattcattaagaccatcgatgatcgcaagtga
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integrated database retrieval system
