KEGG   Salmo trutta (river trout): 115200070
Entry
115200070         CDS       T08542                                 
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1-A isoform X1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:stru03036]
    115200070
   03400 DNA repair and recombination proteins [BR:stru03400]
    115200070
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    115200070
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115200070
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_RIG_2nd ANAPC4_WD40 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_EML eIF2A NBCH_WD40 Beta-prop_DCAF12 Beta-prop_TEP1_C WDR90_beta-prop_4th B-prop_COPA_B_2nd Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_ELP1_1st RMC1_N
Other DBs
NCBI-GeneID: 115200070
NCBI-ProteinID: XP_029618631
Ensembl: ENSSTUG00000005393
UniProt: A0A673WRV9
LinkDB
Position
9:complement(17768328..17770488)
AA seq 372 aa
MIFALSSWRYGFVGIIHSYDQFCGCTLCLSVASSCKIASLLAMKDTLALLQKFNAHPDSR
CWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGNYLAS
ASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEED
EYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVW
GLTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTG
ALATACGDDGVRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDN
GEIAVWNYQSEV
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgatatttgcattatcctcttggagatacggttttgttggtatcattcatagctacgac
cagttttgtggctgcacattgtgcttatcagttgccagcagctgcaagatagcaagcttg
ttagcaatgaaggacactttggcccttctacagaaattcaacgcgcatccagattctcgc
tgttggtatgttgcatggaaccccaagggcacattgctggcctcgtgtggtggtgaccgg
gccattcggatatggggaagggaaggtgactcttgggaatgcaagacagtgctccaggat
ggacaccagagagctgtcagaaaggtggcatggtccccatgtggaaactacctggcctca
gccagctttgatgccacaacctgcatctggaagaagaagaatgacgactttgagtgcttg
actgtgttggaaggacatgagaatgaggtgaaatgtgtggcctgggccccatccggtaac
ctgctggccacatgtagcagagacaagagcgtctggatctgggaagtggatgaggaggat
gagtatgagtgtgtgagcgtggtgaactctcatacacaggatgtcaagcatgttgtctgg
cacccaacacaggagctcctggcctcgtgtagctacgacaacaatgtgtgtgtctataaa
gaagaggatgatgactgggagtgcagggcgaccttggagggtcacacctccactgtctgg
ggtttgacctttgacccaagtggccagagactggcctcctgcagtgatgaccgtactgta
aagatctggaaagaatgtcagcctggaggtgggcaggacacggcttggaaatgtgtttgc
accctttcagggtttcatggacggacagtgtatgatattgcatggtgtccgctgaccggt
gccctggcgactgcatgtggtgatgacggagtgcgtgtgtttaaggaggatgagacagct
gatccagaccagcctgttttctccctgtctgcccatgtacccaaggcccacagccaggat
gtcaactgtatcgcctggcaccccaaggaggctgggctccttgtctcctgcagtgacaat
ggggagatagcagtctggaactaccagtctgaggtctga

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