Salmo trutta (river trout): 115200075
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Entry
115200075 CDS
T08542
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
stru04261
Adrenergic signaling in cardiomyocytes
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115200075
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115200075
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115200075
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115200075
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115200075
03036 Chromosome and associated proteins [BR:
stru03036
]
115200075
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115200075
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115200075
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115200075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
115200075
NCBI-ProteinID:
XP_029618638
Ensembl:
ENSSTUG00000009114
LinkDB
All DBs
Position
9:complement(17897458..17927939)
Genome browser
AA seq
447 aa
AA seq
DB search
MAGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEL
ESKNQPQCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFHPMDLMVEASPRRVFANGHTYH
INSISVNSDCETYLSADDLRINLWNLEITDRSFNIVDIKPANMEELTEVITAAEFHPNQC
NTFVYSSSKGTIRLCDMRASALCDQHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY
MMTRDYLTVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGYRQDVTLEASRESSKPRSVLKPRKVCTGGKRKKDEISVDSLDFNKKI
LHTAWHPQDNIIAVATTNNLYIFQNRL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagccggcggcgggggcaatgatgtgcagtggtgtttttctcaagtcaaagga
gcgattgatgacgatgtggctgaagctgacatcatatccactgtggaattcaatcactct
ggggagctactagccactggggacaaggggggccgtgttgtcatctttcagcaggagcta
gagagtaagaaccagccacagtgccgtggagagtacaatgtttacagcaccttccagagc
cacgagcctgagttcgactacctgaagagccttgagatcgaggagaagatcaacaagatc
cggtggctgcctcagaagaacgctgcacagttcctcttgtccacgaatgataaaactata
aagctgtggaaaatcagtgaacgggacaagagaccagaggggtacaacctgaaggaagag
gatgggcgttacagagaccccaccactgtcacaacactacgggtcccagtgtttcatccc
atggacctgatggtggaggccagccccagacgagtgtttgctaatgggcacacctaccac
atcaactccatctcggtcaacagcgactgtgagacctacctgtctgccgatgaccttcgc
atcaacctctggaacctggagatcactgaccgcagctttaacattgtggacatcaagcca
gctaacatggaggagttgacagaggtgattacagcagcagagttccatcctaaccagtgc
aacacctttgtctacagcagcagcaagggcaccatccgcctctgtgacatgagggcatca
gctctctgtgaccagcactccaaactgtttgaagagcctgaggatccaagcaaccgctca
ttcttctctgagatcatctcctccatctctgatgtcaagttcagccacagtgggcgctac
atgatgacccgggactacctcaccgtcaaaatctgggacctcaacatggagtcccgtcca
gtagagacttatcaggttcatgaatacctcaggagtaaactgtgctcactctatgagaat
gactgcatctttgataagtttgagtgctgctggaatggaaatgacagtgttgtgatgacg
ggctcgtacaacaacttcttccggatgtttgaccgaggctaccggcaggatgtgaccctg
gaggcgtctcgggagagcagtaagcctcgctctgtgctcaagccccgcaaggtgtgcaca
ggtgggaagcgcaagaaggacgagatcagtgtagacagcctggactttaacaagaagatc
ctccacacggcctggcacccccaggacaacatcattgccgtggccaccactaacaacctc
tatatatttcagaacagactgtaa
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