Salmo trutta (river trout): 115200158
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Entry
115200158 CDS
T08542
Symbol
clip1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
115200158 (clip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115200158 (clip1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115200158 (clip1)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
115200158 (clip1)
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
115200158 (clip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
115200158
NCBI-ProteinID:
XP_029618816
Ensembl:
ENSSTUG00000013889
LinkDB
All DBs
Position
9:complement(21252323..21306493)
Genome browser
AA seq
2271 aa
AA seq
DB search
MSTTKPSGLKAPSKMGRSTGAPATKITPSAAGSKVAAADKSTPGGGAAGTQDGGENFQVG
ERVWVNGNKPGVVQFLGEAQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEALKGIFTRP
SKLSYTEGEANGTQTAPPSRAGSPTPSTASLASHTPSVKKVSTATPATPASNLARTNSES
ISNLSDTSSVKKGERELKNGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDG
AVAGTRYFQCQAKYGLFAPVHKVTRIGFPSTTPAKAKTTARKLVATPSGLKRSPSASSIS
SMSSVASSVSAKPSRTGLLTETSSRYSRKISGTTAVQEVLKEKQQHIEQLMAERDMERAE
VAKATTHVGEVEQELTLLREDQEQMEAKMDQLRTLVEAADKEKVELLNQLEEEKRKVEDL
QFRVEEACITKGDLETQTKLEHAHIKELEQSLLFEKTKAEKLQRELEDTRVATVSEKSRI
MELERDLVLRTREVADLRLRLEVQQSSEGSDSTTSPLLEEVSSLRAQLASQEDQQQVELA
RLKETLAAAEKAHSEAVSQFQVSSTKISTDNEQLKLRLSQNEKENADVIELWRSKLESAI
ASHQQAMEELKVSFSKGAGSQTTELVETKSALERLKVEHKQALEEVGARCEAEAAARARE
TGELNKQLLVVLEEKECLEESLRSSVESAEEQHLVEMEDVLGKLHTAELKVNELEEHEAK
LVQQTQDRAKEVQEQVAAMEALQSQAGQGNQALQNLRTQLEEAQSQTRSQGNRVSELNSE
LEGKQQELLSLQQSLTSVLQDKVSLEQELGNLKQKLSESTDNQAKSTQTMQGLERRLKAG
EERLDQLANEKAKLQSDISDMMKSSGDSSAQLTKMNQDITQKERRLEELQTQLAEEKERA
ACSEEQQQQEVAQKEQELKGARDEHQGQLGNLQGKITQLEKRLQQGEAQAKDLQTSQQKA
LSEASEHHAKQLQELQGQADQTKQELSVSREKAQELERLVTELQPYKEKAQFLSDELDSS
GQHIERLSTDLKKQISVLAHMSKESSDLKAQKGSLKNQLSELEAKLSASEASHQELSGKT
EELLTLRDKLTKEQEELWTTNRKLDGENASLSREVEKLRVAVEEAQANNKSLSQSEAERQ
SQIEELQKTNAEKNEVLLKYQQEILQQETKRKQLAEVYEKTCEERNELQEELKQSREKLT
SEKDSLLLERDAARNAKKSLDAKNVELQARCQSLSLEKEDFYLKNTQLQAQTETLGKDKV
EMFTQINAAIFDKEAFQALNAELQNQLNITKKDLEKSVRDKVELHASKMSLAKMLDQSKT
SSEVTDSERLHLLQEKEDLLATQRKVCSEKDELIKEREELKEKLRLSTEEVATSKEKVKE
LLSSFGEEKEALCLQNAETEKALHSIRKEKMAIELTLEKQNMESDRLVHEKEELEEKHTK
EISEKCTLTKERDKLAGEIRSMKDQLDSSSKANDDLKQANSNLTSLLEELKQKIEKLEAE
GASLKKEKVDLQAQLQKLCSEREALEKSKTELAEEHHELKGNSEQMRLELIQQNDTLTKK
RDLLLSQQTELNRSLQKDKEDLLLQVQEFKGQTESLSMAKMLLESQQQTEASDRSKLSSA
KDDLSREREDLQTQLFTLTQEKITLLQSESSLKAEVASVCVERDTTASERNSLRSDLGQL
KTTHTGLLGERQGLLEENAQMQVKVQDLTQQSVTREKAMDELSANLKVIGVERKALAGEV
ENLKAQLKERDQEKGDLAGDQVCLSAKLEKLVNEVSSLAKEKVDLLAIQSRLEKDLSSLH
SSQESRDGEHSRLMGEVEMLQVSQIQLEADAQALRAEKAVMEGQHKASVEEASVSTKVRE
EMATSLEDLKVQKDALLKERDKATQQVTQLEAQLKHALSKQLEAAESSGKTAEVVELLTQ
EKGLLQQENSKAQSLLEKFRSAKQEMTNQLDSLKQQNSKYKEELNLSKEQLSSENQKISG
LCQEIDELKQAASVKSQSLVVLQEENNKLTRELGSSKKETSGQQKLEAQQSKLNKQLQEM
KQRETTMKKQLDEEKASLQKSIHKSSALISEKDQELETLMSELSVLRGESATAKTLKFTV
QLLEKDKARLQEHVQSLETSLSGGQDTVTSSSGDAALDQLRENKETAESQAAIEFLNSVI
VDLQKKNEELKGKLEKMAEAALNGNNASELDNYDGGFNKGPSKKKVPPRLFCDICDCFDL
HDTEECPTQMQMPDSPPHTTYHGSKDEERAYCDICEAFGHWTDSCNDDQTF
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaccaagcccagcgggctcaaagcgcccagcaagatgggtaggtcaacgggg
gcgccagccaccaagatcaccccctccgctgccggatccaaagtagctgcagccgacaag
tccactccaggtggcggtgcagctgggacacaagatggcggcgagaacttccaggttggg
gagagagtgtgggtgaatgggaacaaacctggcgtggtgcagttcctgggggaggctcag
tttgcaccaggacagtgggccggcatagtgttggatgagcccattgggaagaacgatggc
tcggtggcaggggtgcgctatttccagtgcgaggccctgaaagggatattcacccgcccc
tccaagctgtcctacacagagggcgaggccaacgggactcagacagcacctccgtcccgg
gctgggtcgcccaccccttccaccgccagcctggcctctcacaccccctctgtcaaaaaa
gtctcaactgcaacgccagccactccagcctccaacctggcacgcacaaacagcgagtcc
atctccaacctctcagacaccagctcggtcaagaagggggagagggagctgaagaatgga
gaccgcgttttggttggtggcacaaaagctggtgtggttcgttttcttggtgaaacagac
tttgccaagggagagtggtgtggtgtggaactggatgagcccctgggaaagaacgatggg
gcagtggcaggaaccagatactttcaatgccaagccaagtatggcctgtttgccccagtc
cacaaggtcacgcgcattggcttcccctccaccacgccggccaaggcaaagaccacggcg
cggaagttggtggccacgccctcgggcctgaagcgcagccccagcgcctcctccatcagc
tccatgagctctgtggcctcctccgtcagcgccaagcccagccgcacaggcctgctgaca
gaaacgtcatcacggtactcgagaaagatctctggcaccacagcagttcaggaggtgctg
aaggagaagcagcagcacatcgagcagctgatggcggagcgggacatggagagggcagag
gtggccaaggcaaccacccatgtgggcgaggtggagcaggaactgaccctgctgagagag
gaccaggagcagatggaggccaagatggaccaattacgcaccctggtggaggctgctgac
aaggagaaggttgagctgctcaatcagctggaggaggagaagaggaaagtggaggacctc
cagttccgtgtggaggaagcttgcattaccaaaggagacctggagacgcagaccaaactg
gagcatgcccacattaaggagcttgaacagagcctgctctttgaaaagaccaaagctgag
aaactccagagagagttagaagacactagggtggccacggtgtcagagaagtcccgcatc
atggaactggagagggacttggtgctgaggaccagggaggtggctgacctgcggctgcgt
ctggaggtccagcaaagctcggagggctccgactccaccacctcccctctcctggaagag
gtgagctctctgagggctcagctggcctctcaggaagaccagcaacaggttgagctggct
cggctgaaggagacgctggcagcggcggagaaggcccacagtgaggcagtgtctcagttc
caagtctcatccactaagatctccacagacaacgagcagctgaagctgcgcctcagccag
aacgagaaggagaatgcagacgtcatagagctgtggcgctccaaactggaatctgccatc
gcctcacaccagcaggccatggaggagctgaaggtgtccttcagcaaaggggccggttcc
cagacgacagagctggtggagaccaagagtgccctggagaggctgaaggtggagcacaag
caggcactggaggaggtgggagccaggtgtgaggcagaggctgcagcccgggcacgggag
acgggggagctcaacaaacagctgctggtcgtgttggaggagaaggagtgcctggaggag
agcctgcggtccagtgtggagagtgctgaggagcagcacctggtggagatggaggacgtg
ctgggcaaactgcacactgctgagctgaaggtaaacgagctggaggagcatgaagctaag
cttgtccagcagacccaggacagggccaaggaggtgcaggagcaggtggcagctatggag
gccctgcagtcccaggcaggccaaggtaaccaagctctccagaacctgaggacccagctg
gaggaggcccagagccaaactcgctcacagggcaacagggtcagtgagttgaactctgag
ctggagggtaagcagcaggagctcctctccttgcagcagagcctgacctctgtgctgcag
gacaaggtctccttggagcaagagctgggaaacctgaaacaaaaactgtcagaaagcaca
gacaatcaggctaagtcaacacaaactatgcaagggctggagaggaggctaaaggctgga
gaggagaggcttgatcagctcgcaaatgaaaaggccaagctccaaagtgacatctcagac
atgatgaagtcatcaggcgacagttcagcacagcttaccaaaatgaatcaagacatcact
cagaaagaaaggaggctggaagagttacagacccaactcgcagaggagaaggagcgggct
gcctgttctgaggagcaacaacagcaggaagttgcccagaaggagcaggagctgaagggg
gccagagacgagcatcagggccagctaggcaacctgcaggggaaaatcacacaactggag
aagagattgcagcagggtgaggcccaggccaaggatcttcagacctcccagcagaaggcc
ctgtctgaggcctcagagcaccatgccaagcagctccaggagctgcagggtcaggctgac
cagaccaagcaggagctgagtgtctccagggagaaggcccaggagctggagaggctggtg
actgagctgcagccttacaaagagaaggctcagtttctttctgatgagctcgactcctcc
gggcagcatattgagcgattgtccacagacctgaagaagcaaatctcagtgctggcgcac
atgtctaaggaaagctcagatctcaaagctcagaaaggaagtctcaaaaatcaactctcc
gaactcgaggccaagctctcggcctcggaggctagtcaccaggagctctcaggtaagact
gaagaacttctgacactgagggacaagctcacaaaagagcaggaggaactttggaccacc
aaccggaagctagatggagagaatgcctcactatccagagaggtggagaagctcagagtt
gctgttgaggaggcacaggccaataacaaatccctaagtcaatctgaagcggagcgtcag
tcccaaattgaggagcttcaaaagacgaatgcagagaagaatgaggtccttttgaagtac
caacaggagatcctgcagcaggaaactaagaggaagcagctagcagaggtctatgagaag
acctgtgaggagaggaacgagctccaggaggagctcaagcaaagcagggagaagctgacc
tctgagaaggatagccttttgttggagagggatgcagccagaaatgctaagaaatccctt
gatgcaaagaatgtggagttgcaggcaaggtgtcagtctttaagcttggaaaaagaagac
ttctatctgaaaaacactcagctgcaggcacagacggagaccttgggcaaagataaagtg
gagatgtttactcaaattaatgctgccatttttgacaaagaggctttccaagccttgaat
gcagagcttcaaaatcagctgaatatcactaagaaggatcttgagaagtctgtccgtgac
aaggtcgagctacatgcttcaaaaatgagcctggccaaaatgctggaccagtccaagacc
agcagtgaggttactgactctgagaggcttcacctcctgcaggagaaagaggacctgctt
gctacccagcgaaaggtgtgttctgagaaagatgaacttatcaaggagagagaagagtta
aaggagaagctcagactctctacagaggaagtggcaacctctaaggagaaagtcaaagag
ctgttgtcatcttttggtgaggagaaggaagcactttgtctccagaatgcggagactgag
aaggcgctacactccatacgcaaagagaagatggctatagaattaacactggaaaagcag
aacatggagagtgaccgtttggtacatgaaaaggaggagctggaagaaaagcacacaaag
gagatctctgaaaagtgtactctaacaaaagagcgtgacaagctagcaggtgagatccgc
agtatgaaggaccagctggacagctcctctaaggccaatgatgacctgaagcaagccaat
tccaacctcacgtccttgctggaggaattaaaacagaagatagaaaagttggaggctgag
ggagcttccttgaaaaaagaaaaggttgatctacaggcacagcttcagaagctttgctca
gagagggaggcccttgaaaaaagcaaaactgaacttgcagaggagcatcatgaactaaaa
ggcaactctgagcagatgcgtttggaactcattcagcagaacgataccctaacaaaaaag
cgggatctcctgctttcccagcagacggagcttaacaggagcctgcagaaggacaaagag
gatctgcttctgcaggtccaggagttcaaaggtcaaacagaatcactttcaatggcaaaa
atgcttcttgaatcgcagcagcagactgaagccagtgaccgaagtaaactgtcctctgca
aaggatgacctctccagagagagagaggacttacagacacagttgttcactctgacacag
gagaagattactctcctgcagtctgaatccagcctgaaggcagaggttgcctctgtttgt
gttgaaagagacacaacggcctctgagagaaatagtttgcgtagtgatttagggcaactt
aagacaacccacactggattgttaggtgagagacagggtctgcttgaggagaatgcccag
atgcaagtcaaagtgcaggacctcactcaacaatctgtcaccagagagaaggccatggat
gagttgtctgccaaccttaaggttattggagtggagagaaaagccttggctggggaggtt
gagaacttaaaggcacagctgaaggagagggaccaggaaaagggtgacttggctggagac
caagtgtgcctgtctgccaagctggagaagcttgtcaacgaggtctcctcactggctaag
gagaaggtagacctcctagctatacagtcccgcctggagaaagacctttcctccctccac
agcagccaagagagtagggatggggaacactcaaggctcatgggggaggtagagatgctg
caagtttcccagatacagcttgaagcagatgcccaggccctacgtgctgagaaggcagtg
atggagggacagcacaaagcctctgtggaggaggcatctgtgtctaccaaggtcagagaa
gaaatggccaccagcctggaagacctgaaggtccagaaggatgccttgctcaaggagagg
gacaaagccacccagcaggtcacccagcttgaggctcaactaaaacatgctctttccaag
cagcttgaggcagcggagtcctcagggaagactgctgaggtcgtggagttgctgacacaa
gagaagggccttctgcagcaggagaatagtaaggcccagtctctgctggagaagttcagg
agtgccaagcaggagatgaccaatcagctggattccttgaagcaacagaattccaagtac
aaagaggagctcaacctttctaaagagcagctcagctcagagaaccagaaaataagcggc
ctgtgccaggagattgatgagctgaagcaagctgcctctgtgaagtcccagtccctggtg
gttttacaggaggagaacaacaagctgaccagggagcttggcagcagcaagaaggagacc
agtggccagcagaagctggaagctcagcagtccaagctcaataaacagttgcaagaaatg
aagcagagagagaccacaatgaagaaacagttagatgaggagaaagcctccctccagaag
tccatccataaaagcagcgccttgatctctgagaaggatcaggagctggagaccctgatg
agtgagttatcagtgctgcgtggggagagcgccacagcgaagacactgaagtttactgtc
cagttactggagaaggacaaggcgcggctgcaggagcacgttcagagcctggagacgagc
ctttcaggaggacaggatactgttaccagctcctcaggtgacgcagctttggatcaacta
agggagaacaaggagactgcagaaagccaggcagcgattgagttcctgaactcggttatc
gtagacctgcagaagaagaatgaggaacttaagggcaagctggagaagatggcagaggct
gccctgaatgggaataatgcaagcgagcttgacaactatgacggcggttttaacaaaggc
ccctccaaaaagaaggtcccaccaaggctcttctgtgacatctgtgactgcttcgacctc
catgatacagaagaatgtcccactcagatgcagatgccggactcccctccccacaccacc
taccacggcagtaaggatgaggagagagcttattgtgacatctgtgaggcctttggccac
tggactgactcctgtaacgatgaccagaccttctag
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integrated database retrieval system
