Salmo trutta (river trout): 115200185
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Entry
115200185 CDS
T08542
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115200185
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115200185
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115200185
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115200185
NCBI-ProteinID:
XP_029618881
Ensembl:
ENSSTUG00000029634
UniProt:
A0A674BIT0
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All DBs
Position
1:53700134..53717800
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AA seq
644 aa
AA seq
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MRGGSSYGDRDRDRGRDRGSPRFGSSRGPPPNKKFGNPGERLRKKKWDLNELPKFEKNFY
NEHPDVQRMSQYDLEEFRRKKEITIRGSGCPKPVSSFSQAHFPQYVMDVLIQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAHEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLKDYVQ
INVGALELSANHNILQIVDVCTEREKDNKLLQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKTQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVNTGR
GGGGRSRFRGNGSNANNPNLMYQDECNRRMRTVGSKDSRGSSSGTGSSSSISRDSRDGGS
SRAGDRSSSSYRSSRDSRSYGSSSSYSQYQSGSSQYKSGSSNGGQDQSAGQFGSVSRSSK
PPPPPSGPQPLMAQKFTPAQPMMGLMGHSPFQFAPPPPPTSQRK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcggttcgtcgtatggagatcgggacagggaccgtggtcgcgacagggggagt
cctcgttttgggtctagcagaggtccccctcccaacaagaagtttgggaacccaggggag
cgtttgcgcaagaagaaatgggacctaaacgagcttccaaagtttgagaagaacttttac
aatgaacatccagatgtccagcgcatgagccagtatgacttggaggagtttcgcaggaag
aaggagatcactatcagggggtcaggctgcccgaaacctgtcagtagcttctcccaggcc
cattttccccagtatgtgatggatgtgctgatacagcagaactttaaggagcccacagct
atccaggcacaaggcttccctctggccctgagtggcagggacatggtgggcatcgcacag
acaggttctgggaaaaccttatcgtatctcctgcctgccattgtgcacattaaccaccag
ccctacctagaaagaggagacggaccaatctgtttggttctggcaccaactcgagagctg
gcccagcaggttcagcaagtggcacatgaatacggcaagtcatcacgcatcaagagcacc
tgtgtctacgggggagcgcccaagggaccccagatccgtgacctggagagaggtgttgag
atctgcatcgccaccccgggtcgtctcattgacttcctggaggcagggaagaccaaccta
cggcgctgcacctacttggtgctggacgaggctgacagaatgctggacatgggctttgag
ccacagatccgcaagattgttgaccagattaggcctgacaggcagaccctgatgtggagt
gccacctggcccaaggacgtgcggcagctagcagaggacttcctgaaggactatgtccag
atcaacgtgggagccctggagctgagcgccaaccacaacatcctgcagattgtggacgtg
tgcacggagagggagaaggacaacaagctgctccagctgatggaggagatcatggctgag
aaggagaacaagaccatcatctttgtggagaccaagaaacgctgcgacgatctgacccgc
agaatgagacgcgatgggtggccagcgatgtgtatccatggtgacaagactcagccagag
agagactgggtgctgacagagttccgtagtggcaaggctcctattcttattgctactgat
gtggcctcacgtggtttggatgtggaggatgtcaaatttgtcatcaattatgactaccca
aactcctctgaggactacatccaccgtatcggccgtactgcccgtagcaccaacaagggt
acagcctacacattcttcaccccgggcaaccttcgtcaggcccgtgagctcatacgtgtc
ctagaggaggcccggcaggccataaaccccaagctgctgcaactggtcaacactggccgt
ggaggaggaggcaggtcacgtttccgtggcaacggctccaacgccaacaaccccaacctg
atgtatcaggatgagtgcaaccggcgcatgcgcaccgtgggcagcaaggacagccggggg
agcagcagcggcacggggagcagcagcagcatcagccgcgacagccgagatggagggagc
agccgtgccggggacaggtcgtcctcttcctacaggagcagcagggacagccgcagctat
ggctccagctcctcctacagccagtaccagagcgggagcagccagtacaagtctgggagc
agcaatggggggcaagatcagtcagcggggcagtttggttcagtcagcaggtccagtaag
ccccctccacccccctcagggccgcagccccttatggcccagaagtttaccccagcccag
cccatgatgggattaatggggcactcgcccttccagtttgctcccccaccccctccaacc
tcacagaggaagtaa
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