Salmo trutta (river trout): 115200221
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Entry
115200221 CDS
T08542
Symbol
ung
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115200221 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115200221 (ung)
Enzymes [BR:
stru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
115200221 (ung)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115200221 (ung)
Prokaryotic type
115200221 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
115200221
NCBI-ProteinID:
XP_029618954
Ensembl:
ENSSTUG00000033062
LinkDB
All DBs
Position
9:23246840..23256430
Genome browser
AA seq
303 aa
AA seq
DB search
MNVPYLRRSPIMFLTAPLTATRVSPTLHFAQYIKVGRVKKLKLSGNGKTESPPSSLCPEL
LARIAKNKQAALEKLSASNTPDAFGESWRKSLGSEFGKPYFRNLMYFVDGERKLNTVYPP
PQHVFTWTQMCDIQDVKVVVLGQDPYHGPNQAHGLCFSVQRPIPPPPSLLNMYKELASDI
EGFQHPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVQWLSSNREGLV
FMLWGAYAQKKGAAIDRKRHHVLPTVHPSPLSAHRGFFGCKHFSKTNELLEKSGKEPIDW
KAL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaccatatttgagacgttctccaataatgtttttaactgcaccattaacagcc
acacgtgtttcaccaaccttgcattttgctcaatatatcaaggttggacgggtgaagaag
ctgaagctatcaggcaacggaaagacggagtcacccccttcttcattgtgtccagaactg
ctggcccgaatcgccaaaaacaagcaagcagcgttggagaaactgagcgccagtaacaca
ccggatgcatttggggagagttggcgaaagagtttgggctctgagtttggaaagccttat
ttcagaaacttgatgtatttcgttgatggagagaggaaactgaacactgtctacccaccc
cctcagcatgttttcacctggacacagatgtgtgacatccaagatgtcaaggttgtagtc
ctcggccaggacccatatcacggtccaaaccaagcccatggattgtgcttcagtgtgcag
agacctatcccacctccacccagcttattgaatatgtacaaagaattggcgtctgatata
gagggcttccagcaccctggacatggagatttaactggatgggctaaacaaggtgtcttg
ttgctcaatgctgtgctgaccgtccgagcgcaccaggccaactctcataaagacaaggga
tgggaaaccttcactgacgctgtggtgcagtggctcagctccaaccgggagggcctcgtc
ttcatgctgtggggggcctatgctcagaagaagggagcagctattgataggaaacgtcac
catgtcctccccactgtacacccctcccctttatctgctcatcgagggttcttcggatgc
aagcacttttccaagaccaatgagttgctggagaaatcagggaaggagcccatagactgg
aaggcactttga
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integrated database retrieval system
