Salmo trutta (river trout): 115200242
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Entry
115200242 CDS
T08542
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115200242
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115200242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115200242
03009 Ribosome biogenesis [BR:
stru03009
]
115200242
04131 Membrane trafficking [BR:
stru04131
]
115200242
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115200242
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115200242
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115200242
Membrane trafficking [BR:
stru04131
]
SNARE
SNARE associated proteins
Others
115200242
Autophagy
Aggrephagy
Other aggrephagy associated proteins
115200242
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115200242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
nSTAND3
AAA_28
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_7
AAA_18
ATPase
ABC_tran
DUF815
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
Sigma54_activat
NACHT
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
115200242
NCBI-ProteinID:
XP_029619002
Ensembl:
ENSSTUG00000035520
UniProt:
A0A674CF84
LinkDB
All DBs
Position
9:23691033..23702608
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESRNDDLSTAILKQKTRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRESVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLNDDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWGDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRECIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSAAGG
SGPSQGTGGTGGGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaggagaatccagaaatgatgatctttccactgcgattctgaagcagaag
accagacctaacagattgattgtcgatgaatccatcaatgaagacaacagtgtggtctct
ctctctcaggcaaagatggatgagctgcagctgtttcgtggagacacagtgctgatgaag
gggaagaagcgcagggagtcagtatgtattgttttgtctgacgacacctgctctgatgag
aagatccgcatgaaccgtgtggtccgcaacaacctccgcgtccgtctgggggatgtcatc
agtatccagccgtgtcctgatgtgaagtatgggaagaggatccacgttctgcctattgat
gatacagtggagggaatcactggcaatctatttgaggtctacctcaaaccctacttccta
gaggcctacaggcccatccgcaagggtgatatcttcctggttcgggggggtatgcgtgcg
gtggagttcaaggtggtggagactgaccccaacccctactgcatcgttgcccccgatacc
gtcatccactgtgagggagagcctatcaggagagaggatgaggaggagtccctgaatgag
gtgggctatgacgatatcggaggagtgaggaagcagctggctcagatcaaggagatggtg
gagctgccactcagacaccctgcactattcaaggctataggagtcaagcccccccgtggt
atcttgctgtatggaccccccggtacagggaagactctgattgccagagctgtcgctaat
gagaccggagccttcttctttctcatcaacggtcctgagatcatgagtaagctggctgga
gagagtgagagcaacttgaggaaggcctttgaggaggctgagaagaactctcctgccatc
atcttcattgatgagctggatgctatcgctccaaagagagagaagacccatggagaagtg
gagaggcgtatcgtgtctcagctgctgaccctgatggacgggctgaagcagagggctcat
gtcattgtcatggcagccaccaacagacccaacagcatagacgctgcacttaggagattt
gggcgttttgacagggaggtggacattggaatccctgatgctacaggcagactggaaatc
ctgcagattcacaccaagaacatgaaactgaatgacgatgttgaccttgaacaggtggct
aatgagacccacggccacgtgggtgctgacctggctgccctgtgctctgaggctgctctc
caggccatcaggaagaagatggacctaatcgacttggaggacgagaccatcgatgcggag
gtcatgaactccctggccgttaccatggacgacttcaggtgggctctgagccagagtaac
ccatcagctctgagggagacggtggtagaggttcctaacatcacctggggggacattgga
ggactggaagacgtcaagagggagttgcaggaactggtgcagtacccagtggagcaccct
gataagttcctgaagttcggtatgaccccgtctaagggagtgttgttctacgggcccccg
ggttgcggtaagaccttgctggccaaggccatcgccaacgagtgccaggccaacttcatc
tccatcaaaggacctgagcttctcaccatgtggttcggagagtctgaggctaatgtcagg
gagatctttgacaaggctcgccaggcagccccgtgtgtgttgttctttgacgagctggac
tccatagcgaaggcccgtgggggtaacgtgggagatggtggcggagcggccgaccgtgtt
atcaaccagatcctgactgagatggacggcatgtccagcaaaaagaacgtcttcatcatc
ggcgccaccaatcgccctgacatcattgaccccgccatccttcgacccggccgtctggac
cagcttatttacatccctctgcctgacgagaagagcaggatcaacattctcaaggctaac
ctccgcaagagccccattagcaaggatgttgatctggacttcctggctaagatgaccaat
gggttctcgggtgctgaccttacagaaatctgccagcgggcctgtaagctggccatcaga
gagtgcatcgagaacgagattcgccgagagagggagaggcagaccaacccttctgctatg
gaggtggaggaggatgaccctgtgccagagatcaggaaggaccactttgaggaggccatg
cgattcgctcgccgctccgtcagcgacaatgacatccgcaaatacgagatgtttgcccag
acactgcagcagagccgaggctttggcagcttcaggttcccatccagtgctgcagggggc
agtggtccaagccagggtaccgggggaactggcggggggccagtgtttaacgaggataac
gatgacgacctgtatggatag
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