Salmo trutta (river trout): 115200281
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Entry
115200281 CDS
T08542
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
stru
Salmo trutta (river trout)
Pathway
stru04142
Lysosome
stru04144
Endocytosis
stru05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115200281
04142 Lysosome
115200281
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115200281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115200281
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115200281
Membrane trafficking [BR:
stru04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
115200281
Exosome [BR:
stru04147
]
Exosomal proteins
Proteins found in most exosomes
115200281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
115200281
NCBI-ProteinID:
XP_029619081
Ensembl:
ENSSTUG00000046488
LinkDB
All DBs
Position
9:complement(25006947..25050601)
Genome browser
AA seq
1676 aa
AA seq
DB search
MAQILPIRFQEHLQLQSLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIIDMADPNN
PSRRPISADSAIMNPTSKVIALKEDAAKCLQIFNIEMKSKMKAHTMTEEVMFWKWISVNT
VALVTEAAVYHWSMEGDSQPIKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVV
GAMQLYSVDRKVSQPIEGHAAAFGEFKVEGNTKASTLFCFAVRSQAGGKMHIIEVGHPAT
GNQPFTKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHLYDLESGVCIYMNRI
SAETIFVTAPHEPTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAMRSNLA
GADELFARKFNTLFAQGSYSEAAKVAASTPKGILRTAETIRKFQSVPGQPGQASPLLQYF
GILLDEGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECCEELGDLVKAVDPTLALSV
YLRANVPSKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVSPDQGLQFSQMLVA
DEEPLANINQIVDVFMEGSLIQQCTSFLLDALKNNQPAEGHLQTRLLEMNLLHAPQVADA
ILGNQMFSHYDRAHIAQLCEKAGLLQRALEHYTDLFDIKRTLVHTHLLNPEWLVNFFGAL
SVEDSIECLRAMLSANIRQNLQLCVQVASKYHEQLGTNALVDLFESFKSFEGVFYFLGSI
VNFSQDPDVHFKYIQAACKTGQIKEVDRICRESNCYDPDRVKNFLKEAKLTDQLPLIIVC
DRFDFVHDLVLYLYRNTLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRG
QFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLKENT
FYDSTVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWAN
VLEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVF
SEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVN
TSAIQVLIEHISNLDRAYEFAERCNEAAVWSQLARAQLQRDLVKEAIDSYIKADDPSAYM
EVVSAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTGRLAELDEFVSGPNNAHI
QQVGDRCFEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCF
ACVAGEEFRLAQICGLHIVIHADELEELISDYQDRGYYEELIALLEAALGLERAHMGMFT
ELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVLTM
MSHPTDAWKEVQFKDIIAKVANVELYYKSLSFYLDYKPLLSNDLLTILSPRLDHSRAVIY
FTKMKQLKLVKPYLRSVQSHNNKGVNEALNNLLTEEEDYQGLRASIDAYGNFDTVVLAQR
LEKHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFL
EEGRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLGESES
QRKTEEKVTEPTPIVFGQQLMLTAGSAPVAPQPGYPGGYGYAAPGYPTQPSYSYNM
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagctgcagagcctgggggtg
aatccggccaacatcgggttcagctacctgaccatggagtctgacaagttcatctgcatc
cgggagaaggtgggtgagcaaaaccaggtggtgatcatagacatggctgaccccaataac
cccagcaggcgacccatttccgctgacagcgccatcatgaaccctacaagcaaggtcatt
gccctgaaagaggacgctgctaagtgcctgcagatcttcaacattgagatgaagagtaag
atgaaggctcacaccatgacagaggaagtcatgttctggaagtggatctctgtcaacacc
gtcgccttggtgactgaagcagccgtctaccattggagcatggagggggactctcagcca
atcaaagtgtttgatcggcacgccagtctggctggttgtcagatcataaactacagaaca
gacgaacagcagaagtggcttctgcttatcgggatctcggcacagcaaaaccgtgtggtg
ggggccatgcagctgtactccgtggacaggaaggtgtcccagcccatcgagggacatgct
gcagccttcggagagtttaaggtggagggcaacaccaaagcttctactctcttctgcttt
gctgtgcgcagccaggctggtggcaagatgcatatcatagaggtgggtcatccggctaca
gggaaccagccatttaccaagaaggcggttgatgtgttcttccctcccgaggcgcagaca
gacttccccgtcgccatgcagattggcaccaagcatggcgtgatctacctgatcactaag
tatggctacatccacctgtatgatctggagtcaggagtgtgtatctatatgaaccgcatc
agcgctgagaccatcttcgtcaccgccccccacgaacccacctccggcatcattggggtt
aacaagaagggacaggtgttgtcagtgtgtgtggaggaggagaacatagtgaactatgcc
accaacgtgctgcagaacccagacctgggcctgaggatggccatgcgttctaacctggcc
ggagcagatgagttgtttgccaggaagttcaacacgctgttcgcccagggctcctactcc
gaggctgccaaggtggctgcctccacaccaaagggtatcctgcggacagcggagaccatc
cgtaaattccagagtgtgccaggccagccaggccaggcctctcccctgcttcagtacttt
ggcatcctgctggacgaaggccagctcaacaagtttgagtctctggagctgtgcaggccc
gtgctacagcagggacgcaagcagctgctggagaagtggctgaaagaggacaagctggag
tgttgtgaggagcttggtgacctggttaaggcagtagatcctactctggccctcagcgtc
tacctcagggccaacgtacccagcaaggtgatccagtgcttcgctgagaccggacagttc
cagaagatagtgctttacgccaagaaggtgggctacactccagactgggtgtttctgttg
aggaatgtgatgcgggtcagcccagaccagggtctacagttctctcagatgctggttgca
gatgaggagcccctggccaacatcaaccagatagtggatgtgttcatggagggcagtctg
atccagcagtgcacctcattcctattggacgctctgaagaacaaccagccagccgaggga
cacctacagacacgcctcctggaaatgaacctcctccatgctccccaggtggctgatgca
atcctgggaaaccagatgtttagtcactatgaccgagcccacatcgcccagctgtgtgag
aaggctgggctgctgcagagagctctagaacactacactgacctgttcgacatcaaaagg
actctcgtacacacacacctgctcaaccctgagtggctggtgaacttctttggcgccctg
tcagtagaggactctatagagtgtcttcgggccatgttatcagccaacatccgacagaac
cttcagctgtgtgtccaggtggcgtctaaataccatgagcagctgggaacaaatgccctg
gtggatctcttcgagtccttcaagagctttgagggtgtgttctacttcctgggttccata
gtgaacttcagccaggaccctgacgtccattttaaatacatccaggcggcctgtaagacc
ggacagatcaaggaggtggatcgcatctgtagagagagcaactgttatgacccggacagg
gtcaagaacttcctcaaggaggctaaactgacagaccagctgcctctgatcatagtgtgt
gaccgctttgactttgtccatgacctggttctctacctctaccgcaacactctgcagaag
tacattgagatctatgttcagaaggtgaaccctagccggctgccggtggtgataggaggt
ctgttggatgtagactgtgctgaagacgtcattaagaacctgatcatggtggtgagagga
cagttctccacagacgagctggtggcagaggtggagaagaggaacagactgaagctgttg
ttgccgtggctggagtctcgtatccacgagggctgtgaggagccggctacccacaatgcc
ttggctaagatctacatagacagtaacaacaacccggagcgcttcctgaaggagaacacc
ttctacgacagcactgtagtggggaagtattgtgagaagagagacccccacctcgcctgt
gtcgcctacgagaggggccagtgtgacctggaccttatcaaggtgtgcaatgagaactcc
ctgttcaagagtgaggctcgctacctggtcagacggaaagacccagaactatgggccaat
gttctagaggagaacaacccttttagacgccaactcatagaccaggtggtgcagacagct
ctgtcagagacccaggacccagaggaggtgtcggtgacagtcaaggcctttatgacagct
gacctgcccaatgagctcatcgaactactggagaagatcgtactggacaactcagtcttc
agcgagcaccgaaacctccagaacctgttgatcctgacggccatcaaggcagaccggacg
cgtgtgatggagtacatcaaccgcctggacaactacgacgccccagatatcgctaacatc
gccatcagcaacgagctcttcgaggaggccttcgccatcttcaaaaagtttgacgtcaac
acctccgccattcaggttctgatcgagcatatcagtaacctggacagagcctatgagttt
gcagagcgttgtaatgaggctgctgtatggagtcagctggccagagcccagctccagaga
gacctggttaaagaggccatcgactcctacatcaaagctgacgacccgtcagcctacatg
gaggtggtcagcgcggccagcaagaacaataactgggaggatctggtgaagttccttcag
atggctcgtaagaaggcccgggagtcgtacgtagagacagaactcatctttgctctggct
aaaactggcagactggccgaactagatgagtttgttagcggacctaacaatgcccatata
caacaggtgggagataggtgttttgaggagggcatgtatgatgctgctaagctgctgtat
aataatgtgtccaactttgcccgcctggcgtccacgctggtacacctaggagagtaccag
gctgctgtggacagcgccaggaaagccaacagcacacgcacctggaaggaggtgtgtttt
gcgtgtgtggctggggaggagtttcggttggctcagatctgtggtcttcacatcgtcatc
cacgctgatgaactggaggagctcatcagtgactatcaggaccggggctactatgaggag
ctgatagccctgttggaggcagcattgggtttggagcgtgctcacatgggcatgttcaca
gagctggccatcctctactccaaattcaaaccccagaagatgagagaacatctggaactc
ttctggtcccgtgtcaacatccctaaggtgctgcgagcggcggagcagtcccacctgtgg
gcggagctagtgtttctgtatgataaatacgaggagtatgacaatgctgtcctcacgatg
atgtcacaccctactgacgcatggaaggaggtgcagttcaaggacatcatcgccaaggtg
gccaatgtggagctgtactacaaatccctttccttttacctggattacaaacctctgctg
tcaaacgaccttctgaccatattgtcaccacggttagaccacagccgggcggtcatatac
ttcaccaagatgaagcagttgaagttggtaaagccttacctgcggtcagtccagagtcac
aacaacaagggagtcaacgaggccctcaataacctactgacagaggaggaggactaccag
ggtctgagggcatcgatcgacgcgtatggtaactttgacaccgttgttctggcccagaga
ctggagaagcatgagctgattgagttcagacgcatagcagcatacctctacaaaggcaac
aaccgctggagacagagcgtggaactctgcaagaaggacaaattatacaaggatgcaatg
ctgtatgctgccgagtctaaggatgcagagctggctgagaccctgctgcagtggttcctg
gaggagggcaggaaggagtgtttcgctgcctgtctgtttgcctcctatgacctgctgcac
cctgacgtggtgctggagctggcctggagacacaacatcatggactttgccatgccatac
ttcatccaggtcatgagggagtatctcaccaaggtggacaaactgggggagtcagaaagc
caaaggaagactgaggaaaaagtcacagaacccacccccatagtgtttggtcaacagctg
atgttgacggcaggttccgctccagtggctccccagccaggatatccaggaggctatgga
tacgctgctccaggctaccccacccagccctcctacagctacaacatgtag
DBGET
integrated database retrieval system
