Salmo trutta (river trout): 115200372
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Entry
115200372 CDS
T08542
Name
(RefSeq) vesicle-associated membrane protein 8
KO
K08512
vesicle-associated membrane protein 8
Organism
stru
Salmo trutta (river trout)
Pathway
stru04130
SNARE interactions in vesicular transport
stru04140
Autophagy - animal
stru04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115200372
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
115200372
04140 Autophagy - animal
115200372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115200372
Membrane trafficking [BR:
stru04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
115200372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
CcmD_alt
ODV-E18
Integrase_H2C2
Baculo_F
LMBR1
LRRC37AB_C
RIFIN
RNF152_C
DUF3619
OAD_gamma
DUF2207_C
DUF5693
DotU
Orf78
Motif
Other DBs
NCBI-GeneID:
115200372
NCBI-ProteinID:
XP_029619253
LinkDB
All DBs
Position
9:complement(29400759..29405159)
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AA seq
116 aa
AA seq
DB search
MDNNLEKGEVVEQDKVKTLQSQVEGVKDIMTQNVDRILARGERLDDLMGKSEDLQAGAED
FKHTSQKVARSYWWKNMKLWVVIVVIVLIIILIIILLSTGVIPTSSPVPKPTKKPN
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggataataatttggagaagggagaggtggtggagcaggacaaggtgaagaccctgcag
tctcaggtggagggagtgaaggacatcatgacccagaacgtggaccggatccttgcccgg
ggagagaggctggacgacttgatgggcaagtcagaggacctgcaggctggggctgaggac
ttcaagcacacgtcccagaaggtggctcgctcctactggtggaagaacatgaagctgtgg
gtggtgatcgtggtcattgtcctcatcataatcctcatcatcatactgctcagcactggc
gtcatcccaaccagctcccctgttcccaaacctactaaaaaaccaaactag
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