KEGG   Salmo trutta (river trout): 115200412
Entry
115200412         CDS       T08542                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
stru  Salmo trutta (river trout)
Pathway
stru03420  Nucleotide excision repair
stru04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115200412 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    115200412 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:stru04121]
    115200412 (ercc8)
   03400 DNA repair and recombination proteins [BR:stru03400]
    115200412 (ercc8)
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     115200412 (ercc8)
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      115200412 (ercc8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML_2 EIF3I Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st WDR55 NBCH_WD40 Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st WD_LRWD1 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 115200412
NCBI-ProteinID: XP_029619334
Ensembl: ENSSTUG00000024879
UniProt: A0A674AH34
LinkDB
Position
9:32315045..32334330
AA seq 399 aa
MLGFLTARQAGLDDPLRLRRAESTRRVLNLELNHDRDVDRIHSNGINTIDIEVIEGRYML
SGGADGVIVVYDLENNSRKPQYTCKAVCTVGRSSPYVHRFSVETVQWYPHDTGMFVSSSF
DQTMKVWDTETLKPAEVFQFEGNVYCHHMSPIARKHSLIAVGTKDQKVQLCDLKSGSRIQ
VLQGHRGEVLSVRWSPRYEHILATASTDSRVLVWDVRRASGSLFSLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTVDGLYLLTTGTDDRMRLWNSANGKNTLVNYGKVSNESRKGLKITV
SRSCSPEFVFVPCGSSVAVYTLHTGELVTMLRGHYNNVDCCQFHPDYQELYSGGKDCNIL
AWVPVVRPPDVEEEGTAAKGGSQATVNPAFEDAWSSDED
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgttgggttttctaacagcaagacaggctggacttgacgacccacttcgtctgagacgg
gcagagtcaacacggagggtcctcaatttagagctgaatcatgacagagatgtggatcga
atccatagcaacggcataaacaccatagacatcgaagtcattgagggcagatacatgcta
tctggaggggcagatggggtgattgtggtgtatgacctggagaacaacagcaggaaacca
caatacacctgtaaagcagtctgcactgtaggcaggtccagtccgtatgtccacaggttc
agtgtagagacagtgcagtggtacccacacgacacaggcatgtttgtctccagctccttt
gaccaaaccatgaaggtctgggacactgagacactaaagcccgctgaagtgttccagttt
gaaggaaacgtctactgtcaccacatgtcccccattgccaggaaacacagcctcatcgca
gtgggtaccaaagaccagaaagtacagctctgtgacctgaagtctggctcacgcatccag
gttctgcagggtcacagaggtgaggtcctatctgttcggtggtcgccaagatatgagcac
attttagctacagccagtactgacagcagggtgttggtgtgggatgtgcgtcgggcctca
gggagcctgttctctctggaccaacacaacggggacaagtccaaggcctcgtcagaggca
gtgaacacagcccataatggaagggtaaatggcctctgcttcacggtcgacggcctctac
cttctcaccacgggaacagacgaccgcatgaggctgtggaacagtgccaatggaaaaaac
acactggtgaattatgggaaggtgagtaacgaaagccgtaaggggttaaagatcacggtg
tctcgtagctgcagcccggagtttgtgtttgtaccttgtggcagctcggtggcggtgtac
actctacacacgggggaacttgtaaccatgctgaggggtcactacaacaacgtggactgc
tgccagttccaccccgactaccaggagctgtacagcggtggtaaagactgtaacatccta
gcctgggttcctgttgtacgaccaccagacgtggaagaagaagggacagccgccaagggt
gggagccaggctacggtgaaccctgcttttgaagacgcatggagcagtgacgaggactga

DBGET integrated database retrieval system