Salmo trutta (river trout): 115200429
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Entry
115200429 CDS
T08542
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1 isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115200429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115200429
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115200429
mRNA degradation factors
5'-3' decay
Lsm complex
115200429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
115200429
NCBI-ProteinID:
XP_029619366
Ensembl:
ENSSTUG00000028860
UniProt:
A0A674B548
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All DBs
Position
9:complement(32792831..32795368)
Genome browser
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIDDIDKKHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVCKKFGDIP
RGIFIVRGENVVLLGEIDIDKLCDNVLQQVSIEEILEEQRLQQQAKQKTEKAKVTALKDR
GLSIPKADHLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccagggaccgcgagtctcatcgatgatatagacaaaaagcatcttgta
cttcttcgagatggacgaacgctaattgggtttctgagaagcattgaccagtttgccaac
ctagtttttcatcaaacagttgagcgcatccatgtgtgcaagaagtttggagacatcccc
agaggaatcttcattgtgagaggagagaatgttgttttgcttggagaaatagacattgat
aagctgtgtgacaacgtcttgcagcaagtttctatagaggagatcctggaggagcagcga
ttgcaacagcaagccaagcagaagacagagaaagccaaggtgaccgcgctgaaggacaga
ggcctatccatcccaaaagcagatcatctcgatgaatactga
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integrated database retrieval system
