Salmo trutta (river trout): 115200525
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Entry
115200525 CDS
T08542
Name
(RefSeq) protein transport protein Sec24C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
stru
Salmo trutta (river trout)
Pathway
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115200525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115200525
Membrane trafficking [BR:
stru04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115200525
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
115200525
NCBI-ProteinID:
XP_029619509
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Position
9:complement(39176243..39201695)
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AA seq
1121 aa
AA seq
DB search
MDIPAANQSYGHGGQPGVCHNGWSATTPPTGLGCTTAQGLSSDPLPSLQGLNLGPASHQN
PSNNIPQSMVQLQYSHQGCLSSLPMPPFRNQSPSALIPCLNQEPHIPHVHMGPYISYNIP
PPSILLPLKQGPPASGPPSTIPSSNQGPQNTVSPPVSSSPPYPPYPYANQGFVNGPPVTL
TSPNQGFVNGPPVTLTSPNQGFVNGPPVTLTCPNQGFVNGPPVTLTSPNQGSVNGPPVML
TSPNQGSVNGPPVMLTSPNQGPPNSSFSSMSPCGSQGQQCSHPYPPQLTSPVQQQPQWAL
PQQHYSHSGVMYKPGTISHPVQEGTIMQPSCPSPGDSGVSGPSSLISESRYGLHPQLLPS
AVRVMEEDRTAWEGKVFVSEPISSLPPLATTDCVVEDRGNCSPRFILSTSYCVPCEGQTA
LQSHLPLGALVTPLARLHTGERPLSVCMEADTVKGCGECGAYMCSAMGWQDCGQRFYCPF
CGKLREVGWQHYQPTQGVEGNRVDREQRPELSLGSYEILDSQQDVPAAVLLLAVDVSAAA
LRGGNLELISQQLRSLLTSLNREEGALQSDVRVGLMTYDSRIHLYDLSPALSRPHMLVIT
ETEDLQLPVREGLLVPLKDCIDSINSVLQRIPVFSAEFEEASGVLLELPVKAGLAVLQEG
GCPGKLLVFQTAPFTEGTHTHNSSGFFSSNKPKSLFQPPDTAVSLAKECVSQGCGVHLFV
FSQQDVGGAWPGHVPYLTGGELHCYHSLQGELDRERFSSDLRRTVETETGYRATLRVHVS
KDLRVSGCYGSFVPGPNPAHVAMATLDWRTTLAVELTHSRALDEKRGVVIQTILSYTSQQ
GERRTRVHSLSLCCSHHLLDTFCNCQAQTLLTFYCKKMYCAVLERPLQELREELQTEVTE
SLACYRKHCSSSSVSPGQLVLPQYLKTLPVYLNSLRKSEVLLPGLRSSVHQRLQLRCQVV
SMDTKTTAGHFYPLLLPLPVGGDTSSPLSLGEAVRCTAASLDHGGLYLVHGPLVLLLWVG
HNVANTALVQLFNITCLSTLPSGETKLPVLDNPLSVTVRSLINTLNSKTHYTRKLRVVKQ
GDSCEEALQRLLVEDKSPNGGASYADFLYHLHVNSIQLLVR
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggacattccagctgccaatcagagctacggacatggcgggcagcccggggtgtgtcat
aatggctggtcagcaaccacacccccaaccggtcttggatgtaccactgcccagggactc
tccagtgaccctctacccagcttacagggtctgaacctgggcccagcctcacaccagaat
ccctctaataacatccctcaatccatggttcagttacagtactcacaccagggctgtctc
agcagtcttcctatgcccccatttaggaaccaatcaccttcagctctgataccatgcctg
aatcaagagcctcacataccacatgtacacatgggtccttatatttcctacaacatccct
ccaccatcaatactcctccctctgaaacaaggaccgccagctagcgggcctccatccacg
ataccgtcttcaaaccagggtccccagaatactgtctctcctccagtctcttcctctcct
ccatatcctccatatccgtatgcaaaccaaggctttgtgaatggccccccggtgacgttg
acaagtccaaaccaaggctttgtgaatggccccccggtgacgttgacaagtccaaaccaa
ggctttgtgaatggccccccggtgacgttgacatgtccaaaccaaggctttgtgaatggc
cctccggtgacgttgacaagtccaaaccaaggctctgtgaatggccccccggtgatgttg
acaagtccaaaccaaggctctgtgaatggccccccggtgatgttgacaagtccaaaccaa
ggacctcccaacagcagtttttcatccatgtcaccatgtgggagccagggccaacagtgt
tcacacccgtatcctccacaactcacctcaccagtccagcagcaacctcaatgggccctg
cctcagcaacactatagtcacagtggtgtaatgtacaagcctggtaccatctcgcatcct
gtacaggagggtaccatcatgcaaccgtcctgtccttctccgggggacagtggggtgtcc
ggccccagctcacttatctcagagtcacgctatggcctacaccctcagcttctacccagc
gctgtgcgtgtgatggaggaggacaggacagcgtgggaggggaaggtgtttgtgtctgaa
cccatctcctctctacctccgctggctaccacagactgtgttgtggaggacagaggtaac
tgcagtcctcggttcatcctttctacctcctactgcgttccgtgtgagggccagacagcc
ctccagagccacctacccctgggggccctagtcacccctctggcgaggctacacacagga
gagcgccccctgtctgtgtgtatggaggcagacactgtaaagggctgtggggagtgtggg
gcttacatgtgttcagctatgggatggcaggactgtggacagagattctactgcccattc
tgtgggaaactccgtgaagttggatggcagcattaccagccaacacagggagtagagggg
aacagagtggacagagagcagagacctgagctcagtctgggctcctatgagatactggac
agtcaacaggatgtgcctgctgctgtcttgctcctggctgtggatgtgtctgctgcagca
ctgagaggaggaaacctggagctcatcagtcagcagctacgttctctactcacatcacta
aatagggaggaaggtgcgttacaatcagatgtccgtgtggggttgatgacctatgacagc
cgaatccacctctatgacctcagccctgccctgtcccgcccacacatgctggtcatcacg
gagacagaggacctgcagcttcctgtgcgggaggggcttttggtgccactcaaagactgt
atagacagtatcaacagtgtcctgcagcgtatccctgtgttcagtgcagagtttgaggag
gccagtggagttctcctggagctgcctgtcaaggctggactggccgttctacaggagggg
ggttgtcctggcaagctgctggtcttccaaaccgctcccttcaccgagggaacacacaca
cacaactcctcgggcttcttcagctccaacaaaccaaagtctctgtttcagcctccggac
actgctgtgtcattggctaaggagtgtgtcagtcagggctgtggcgtgcacctgtttgtg
ttctcccagcaggatgtgggcggggcttggccaggacatgttccttacctgacaggtgga
gagctgcactgctaccacagtctccagggagagttggacagggagcgtttcagcagtgac
ctgaggaggactgtagagacagagacgggctatagggccacactcagggtacacgtcagt
aaagatctgcgcgtgtcagggtgttatggctcgttcgtccccgggcccaaccccgcccac
gtcgctatggcaacccttgattggcggacgacactggccgttgagttaacacacagcaga
gctctggatgaaaagaggggcgtggtcatacagaccatcctgtcctacaccagccagcag
ggagagagaaggaccagggtccacagtctgtctctgtgctgctcacaccacctactggac
accttctgtaactgccaggcccagaccctgctcaccttctactgcaagaagatgtactgt
gccgtgttggagcgccctctacaggagctgagagaggaactgcagacagaggtgacagag
tctttggcctgctataggaaacactgcagctcgtcctctgtgtccccgggacagctggtc
ctcccccagtacctgaagaccctgccagtctacctcaacagcctgaggaagagtgaagtt
ctgctacctggcctccgcagctcagtacaccaacgcctgcagctccgctgtcaagtggtc
tccatggataccaagaccacagcaggacacttctaccctctgctgctaccactgccagta
ggtggcgatacctccagtcctctcagcctaggggaggctgttcgctgcactgctgctagc
ctggaccatggaggtctctacctggtccacggacccctggttctgctactctgggtgggc
cacaacgtcgccaacaccgccctggtccaactcttcaacatcacctgtctgtccacgcta
ccctctggagagacgaagctgcctgtgctggacaaccctctgtctgttactgtgaggtca
ctcatcaacaccctgaactcaaagacacactatactcgcaagctgcgtgtggtgaagcag
ggggacagctgtgaggaggctctacagcgcctcctggtagaagataagagtcccaacggg
ggagcgagctacgctgacttcctgtaccacctccatgtcaactctatacaactgctggtt
cgttag
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