Salmo trutta (river trout): 115200571
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Entry
115200571 CDS
T08542
Symbol
gtf2h2c
Name
(RefSeq) general transcription factor IIH subunit 2-like protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
stru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115200571 (gtf2h2c)
09124 Replication and repair
03420 Nucleotide excision repair
115200571 (gtf2h2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115200571 (gtf2h2c)
03400 DNA repair and recombination proteins [BR:
stru03400
]
115200571 (gtf2h2c)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115200571 (gtf2h2c)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115200571 (gtf2h2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
DZR
Motif
Other DBs
NCBI-GeneID:
115200571
NCBI-ProteinID:
XP_029619599
Ensembl:
ENSSTUG00000004542
LinkDB
All DBs
Position
9:40919912..40924928
Genome browser
AA seq
393 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEILKEDESGSLKATVEEILFQAKRKRVFESHGQVRLGMMRH
LYVVIDTSRTMEDQDLKPNRLTSTLKLVEYFVEEYFDQNPISQVGIITTKNKRAEKLTDL
AGNPKKHIDALKKAKDSTCGGEPSLYNSLSLAMQTLKHMPGHSSREVLIIFSSLTTCDPA
NIYELVKTLKALKIRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFRELLMFHVKPPP
ATSSSECSLIRMGFPQHTIATLSDQDAKPSFSQAHLDSTSGGPGLSMGGYFCPQCQAKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLEAFQESPLLLHHRERFCEACQGELKDKSVFT
CPSCSSVFCVECDLFIHDTLHCCPSCIHSRSAT
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagagccagagagagccaagcgttgggaggggggttatgagcgaacatgggag
atattgaaggaggatgagtctggatctctcaaagccactgtggaggaaatccttttccag
gccaaaaggaaaagggtgttcgagagccatggacaagttcggcttgggatgatgcgtcac
ctgtacgtggtgattgacacctctagaaccatggaagaccaggacctgaaacccaaccgc
ctcacctctacactcaagctggtggaatatttcgtagaggaatactttgaccagaatccc
atcagtcaggtgggtatcatcaccacaaagaacaagagagcagagaagctgactgacctg
gcagggaacccaaagaagcacatcgatgccctgaagaaagcaaaggactctacgtgtggg
ggagaaccctctctatataactccctcagcctggccatgcagacactcaaacacatgcca
ggccacagcagcagagaagtcctcatcatcttcagtagtctcaccacatgtgacccagct
aacatctacgagctggtcaagactctgaaggctctgaagatccgtgtgtctgtgatcggc
ctgtcagccgaggtgcgtgtctgcaccgtgctcaccagagagaccggggggtcgtaccat
gtgatcctggatgagagccacttcagggagctgctgatgtttcatgtgaagcctcctcct
gctacctcctcctctgagtgttccctcatacgcatgggtttcccccagcacaccatagcc
actctatcagaccaggatgccaagccttctttcagccaggcccatctggacagcactagt
ggtggtcccggtctgtctatgggagggtacttctgtccacagtgccaggccaagtacact
gagctacctgtcgagtgtaaagtctgtgggctgacacttgtctccgctcctcacctggcc
cgctccttccaccacctcttccccctggaggccttccaggagagtcctctgctgctgcac
cacagagagaggttctgtgaagcctgccagggggagctgaaagataaaagtgtgttcaca
tgtccgtcgtgcagcagtgtgttctgcgtggagtgtgacctgttcatccacgacacgctg
cactgctgcccctcctgcatccacagccgcagtgccacctga
DBGET
integrated database retrieval system
