Salmo trutta (river trout): 115200915
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Entry
115200915 CDS
T08542
Name
(RefSeq) rab11 family-interacting protein 3-like isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115200915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115200915
Membrane trafficking [BR:
stru04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
115200915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
115200915
NCBI-ProteinID:
XP_029619890
Ensembl:
ENSSTUG00000011229
UniProt:
A0A673XNF7
LinkDB
All DBs
Position
10:complement(299159..407267)
Genome browser
AA seq
1120 aa
AA seq
DB search
MEHTLMSSPLGYSEWDPERIPSHGFLLMDSDKGAILPQRESGQTGLDFQKVDQGVSLSLE
ELFQENALNLDSLFRTSSYSGGDQILPWEGCQSNHSQDVPLGKPAEVSPLKDKIEEQNNV
SDSPLPGLLFSKMANLFRDISACDEQNPPVGDRDPVTCHRELITLSEPPSTVKVSDRTPD
TNTEASSLLVVHLLSEHSPFLSGPAPSGEVNPQVVSEKLLFPSLDQDRGQPPPLQGGETV
PPENGDKGLFLGPVTDLPTVSNITSEGLPESSLSHNTIPFDRPCLSPEVQVGSVPLVDLE
VPDCGPSLCPTHLDSPTCTGAPSDSTAEDSEQEHTLATAILTLSDHRGEGDSSLLLNSSP
LIEPLLTKALSDRDASILGHLPSGCSSEKNGSQDFMEDKIIFDVTKHKGEEEMALDQCIT
SDALRDEETLDLNPPEALQGDGIPALQTEQSDGERLADLDLFARPTDCHKRDSFDCLVLE
LNGSSSESRWTSEQAVENLSFSKMVGSDSMPVVPIMNRSEEDPSPLKAVFDALDQDGDGF
VRIEEFMEFAAAYGADQVKDLTKFLDPSGLGVISFEDFYRGITAISNGSTEPQLYDVHFS
PGDGAVGCPEEYDEQNEVTDSAYLGSESTYSECEMFTDEDTGALVQPEMHEDVETDSGID
ATLHDPEDSHNRFSLSSELHSLSLVTVIGREEEHFEDFGESNTSELLLDTTEEGTDGEGD
SSHLQTLDQNNFSSLLLSPSAPTTLPASFQSFLREEALDFFCNQCHKQISRLEDLSTRLN
FLEMNSSSKRLSSKKVARHLRNSSMTLDSMGELSRDILDLADTDITEKMLLLERRAAELE
KDSEASGEQHTRLRQENLQLVHRANALEEQLKEQELHAEDHLHQETRRHKDALSKLERER
SLELENLQARLQQLDEENSKLRSCVPCYRANIERLEEEKRKLEDEVEDVTERLNEELETR
RKTSDKLTHERHQNQKEKEHTQELIEDLRKQLEHLQLYKLEAEARRGLSPSAGLQEYQSR
TREAELEQEIRRLKQDNRSLKEQNDELNGQIINLSIQGAKNLVTASFSESLAAEINSVSR
GELMEAIRKQEDVNFRLQDYIDRIIVAIMESNPSILEVKY
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggaacatactctgatgtctagccctctggggtattcagagtgggatccagaacgcata
ccctcccatggattcctcctcatggattcagacaaaggagccatactgcctcagagagaa
agtggtcagacaggtttggatttccagaaagttgaccagggtgtatctctaagcctggaa
gagctttttcaggagaacgccttaaatttagatagccttttcaggacctccagttactct
ggtggagaccagatcttgccctgggagggatgtcaatctaatcattcccaagatgttccc
ctgggtaaaccagcagaggtatcgcctctcaaagacaaaattgaggaacaaaacaatgtc
agtgacagtccactacctgggctgttattctccaaaatggctaatttgttcagggacatc
tcagcctgcgacgaacaaaatccacctgtgggtgacagagaccctgttacctgtcacagg
gagctgataaccctcagtgaacctccttccactgtgaaggtttcagataggactccagat
actaacactgaggcgtcctctttgttggtagttcacctcttatctgaacactcccctttt
ctctccggccctgctccttcaggtgaggtaaacccacaggttgtcagtgagaagctttta
tttccatctctggatcaggacagaggccaacctcctcccttgcaaggtggggagactgtg
ccacctgaaaatggggacaaaggtttattcctaggacctgtgactgatctgcccacagtc
agtaacattacctcagaaggtttacctgagagcagcctctcacacaacaccatccctttt
gaccgcccttgcctatctccagaggttcaggtgggatctgtgcctttggtggatctggag
gttcccgactgtggccccagcctctgccctactcatctcgactcacctacctgcacaggt
gctccatcagattcaactgcagaggattcagagcaggaacacacgttggctactgcaatc
ctgactctctcagaccacagaggtgagggggactcgtccctccttctgaactcctcacca
ttgattgaacccttgttgacaaaggcactctctgacagagatgcttctatcctgggtcac
ctgcccagtggctgtagctcagagaagaatggctcccaggattttatggaagacaaaatt
atttttgatgttactaaacataagggagaggaggaaatggctctggatcagtgcattacc
tcagacgcgctacgtgatgaggaaactttggacttgaatccacctgaggctttacagggt
gatggtattcctgctttacaaactgaacagagcgatggggaaaggttggcagacttggac
ctatttgccagacccacagattgtcacaaacgggatagttttgattgcctggttctggag
ttaaatggttcgtcttctgagtctagatggacaagtgaacaagcagtggagaatctgtca
ttctctaagatggtggggtctgactccatgcctgtggttcccataatgaatcggagcgag
gaagacccgtcacctctgaaagctgtgtttgatgctctggaccaggatggggatggattt
gtacgcattgaggagtttatggagtttgctgctgcctatggggctgaccaggtgaaggat
ctgaccaagttcctggatcccagtgggctgggggtgatcagctttgaggacttctatcga
ggaatcacggccatcagcaatggaagtacagagccccagctctacgatgtgcacttcagc
ccaggggacggagcagtgggctgcccagaggagtacgatgagcagaacgaggtgacggat
agtgcctacctgggctcggagagcacctacagcgagtgtgagatgttcaccgatgaagac
acgggagccctagtccagccagagatgcacgaggatgtggagacggacagtggcatcgac
gcaacgctgcacgaccccgaggacagccacaacaggttctccttgagctcagagctgcac
agcctctccctggtgacagtgatcggcagggaggaggagcactttgaggactttggggag
agcaacacctcggagctgctgctggacaccactgaggaggggacagacggagagggtgac
tcgtcccacctccagaccctggaccagaacaacttctcctccctgctactctctcccagc
gccccaactactctccctgcaagctttcagagcttccttagggaggaggcgctggacttt
ttctgtaaccaatgtcacaaacaaatctctcgcctggaggacctctccactcgcctcaat
ttcctagagatgaatagctccagcaagaggctgtccagcaagaaagtagcacgacacctc
cggaacagctccatgacgctggacagcatgggcgaactgtcccgggacatactggatctg
gccgacaccgacatcactgagaagatgctcctgctggagcgtcgcgcagcagagctggag
aaggactcggaggccagcggggagcagcacacacggctccgccaggagaacctgcagctt
gtgcaccgggccaatgccctagaggagcagctcaaggagcaggagctccatgctgaggac
cacctccaccaggagacccgccgccacaaagatgccctctccaagctggagcgggagagg
agcctggagctggagaacctgcaagctaggctgcagcagctggatgaggaaaacagtaag
ctgaggtcctgtgtaccctgttaccgtgccaacattgagagactagaggaggagaagagg
aagctagaggatgaggtggaggatgtgactgagagactgaacgaggagctggaaacccgc
aggaagacgtccgataagctgacccacgaacgccaccagaaccagaaggagaaggagcac
acgcaggagctgattgaggacctgcggaagcagctggagcacctacagctgtacaagctg
gaggcagaggccaggagggggctctctcccagtgccgggctgcaagagtaccagagccgc
acccgtgaggccgagctggagcaggagatccgacgcctcaagcaagacaaccgcagtctg
aaggagcagaacgacgagctaaacggccagatcatcaacctgagcatccagggagccaag
aacctggtgacggcctccttctccgagtcgctggcggccgagatcaactctgtgtcccgg
ggagagttgatggaagccatccgcaagcaggaggacgtcaacttccgactacaggactac
atcgaccgcatcattgtggccatcatggagtccaacccctccattctggaggtcaagtac
tag
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