Salmo trutta (river trout): 115200964
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Entry
115200964 CDS
T08542
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecule (CAM) interaction
stru04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115200964
04517 IgSF CAM signaling
115200964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115200964
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
NGL family
115200964
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
ig
LRR_14
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
DUF7617
Pam3_Gp34
Zwei_Ig_N
Motif
Other DBs
NCBI-GeneID:
115200964
NCBI-ProteinID:
XP_029619986
LinkDB
All DBs
Position
10:complement(3157284..3175456)
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AA seq
751 aa
AA seq
DB search
MHVVMVTSPSTPSPLLWLVQLLLWLHHHGPQLTEAMPPCPNPCSCSNQASRVICTRKSLE
DVPDSISVNTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLDYI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSKVTVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPVLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSSSDSSNPYSFFTTVTVETVETNNGEDAGRQYINETYVPPDYLGP
TFSGGVLGKGRAGFTISPSRSSLSSFSPRATRNTENTVTVSIMDVTNITGLDDVMKTTKI
IIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPTRAIEIINVEDEIGAGAGSGISGGST
MQSGCGGDGTLRMHHPERVNLPNIGRSEHLNHYYKTNHFNNNVMGLSIGTGAGVGILSNK
NNLSPLSQQGQDIPISCTQVPISSATFQTMSGNGTNTNPLSVSPPLPMSLPMPPMGLHGS
IKGFMGQNQNPQMEPLLFKGNSKENVQETQI
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttgtcatggtgaccagcccctccaccccctcccccctcctctggttggtccag
cttttgctgtggcttcaccaccatggtcctcagctgacagaggccatgcccccatgtccc
aacccctgtagctgctccaatcaggcaagccgcgtcatctgtacaaggaagagtttagag
gacgtaccggacagtatatctgtgaacacaagatacctcaacttacaagagaacacgatt
caggtgataaagtcagacacgttcaagcacctgcggcatttggaaatactgcagctctcc
aagaatcacatccgacagattgaggtgggcgcgttcaatggcctgccaaacctcaacacc
cttgagctctttgacaatcgcctcacgctggtaccatcgcaggcctttgagtacctcagc
aagctgcgggagctctggctacggaacaaccccatcgagacactgccagcgtacgccttt
caccgcgttccctccctgcgccggctcgacctgggcgaactcagaaagctggactacatc
tccgaggccgcctttgagggcctggtcaacttgcgcttcctgaacctgggcatgtgcggc
ctgaaggacatccccaacctcacgcccttggtcagactggaggagctggagctgtcagga
aaccagctggggatcgtcaggccaggctccttccagggcctggtgtcactgcgcaagctg
tggctcatgcactccaaggtgacggtcattgagcgcaatgccttcgacgacctgaagaac
ctggaggagctcaacctgtcccacaactctctgcattcactgccccacgacctcttcacc
ccgctgcaccagttggagcgggtgcacctcaaccacaacccctgggtgtgcaactgcgat
gtcctgtggctcagttggtggctcaaggagaccgtgcccagtaacaccacatgctgtgcc
cgttgccatgcgcccccagtccttaagggccgctacatcggtgagctggaccagagccac
ttcacatgctacgctcccgtcatcgtagagccacccaccgacctcaatgtcacagagggt
atggccgcggagctgaagtgtcgcactggcacctccatgacgtctgtcaactggctcacc
ccaaatggcaccctcatgacccacggatcataccgcgtcaggatctcagtccttcatgac
ggaaccctgaatttcaccaacgttactgtgcaggacacgggccaatacacctgcatggtg
accaactccgccggcaacaccacggcgactgcagtactcaacgtgtcctcctccgactcc
agcaacccctacagcttcttcaccaccgtcactgttgaaaccgtggaaacaaacaatggt
gaggatgctgggaggcagtacatcaacgaaacctacgtaccgccagattacctgggtccc
accttttcaggaggggtactgggtaaaggcagggctggattcaccatatctccatctcgc
tcttctctctcctctttctccccgcgtgccaccagaaacactgaaaatacagtcacagtg
tcgataatggatgtcacaaacattactggcctggacgacgtgatgaagaccaccaagatc
atcatcggctgctttgtggccatcaccttcatggcagccgtgatgcttgtggtcttctac
aagctgaggaagcagcaccagctgcacaagcaccatggccccacccgcgccatcgagatc
atcaacgtggaagatgagattggtgccggggctgggagcggcatctcagggggatcgacc
atgcaatctgggtgcggaggagacggaacattgaggatgcatcacccggaaagagtcaac
cttcccaacattgggcgatcagagcatcttaaccattactacaagaccaatcatttcaac
aacaatgtgatgggtctgagcattgggacaggggcaggagtcggtattctaagcaacaag
aacaatctgtctccacttagccagcaaggccaggatatcccgatctcctgtacacaggtt
ccaatctcctccgccactttccagaccatgtctggaaatggcaccaacaccaaccctctt
tctgtttccccacctctgccaatgtccctccccatgccccccatgggattacatggatcg
atcaagggtttcatgggccagaaccagaacccacaaatggaacctcttctgttcaaggga
aactcaaaggaaaacgttcaagagactcaaatttga
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