Salmo trutta (river trout): 115201090
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Entry
115201090 CDS
T08542
Name
(RefSeq) transcription factor Sox-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115201090
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115201090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115201090
NCBI-ProteinID:
XP_029620232
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All DBs
Position
10:complement(10422455..10425657)
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AA seq
488 aa
AA seq
DB search
MRIWHNQQADQSKFSLNMTEEKSKSFNDHPCSPTGTASSMSQDDSDSDVPSSPTGSDGQA
HGNGITPKMDTSEEDKRFPACIRDAVSQVLNGYDWSLVPMPTRGDRSLKNKPHVKRPMNA
FMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFIEEAERLRVQHKKDYPD
YKYQPRRRKSTKPGQSDSDSGAELAQFHPGQMYKAEPGLARLTSMGNGHNHPERTGHPHG
PPTPPTTPKTELYLGLKHEGRRHLDGGRQNIDFSNLDISELSTDVISNMDAFDVHEFDQY
LPLNGHSSAPAPPDHGHRGHGSNPPSGSLSSSYGHSHSNALPWGPKGAGAEAALPSSSSS
SSTSDGVHHRTQIKTEQLSPSHYSSQHSHSSSPPHPDYTPLSSGSGPSSAASSSSSSLPS
PQCDYADLQSPSYYSAYSSYPAGLYQYPYFHSSRRPYGKPLINSVAIPPPHSPTSNWEQP
VYTTLTRP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatttggcacaatcaacaggcagaccaaagcaaattttcactgaacatgaccgag
gaaaagagtaagtcattcaacgaccatccatgtagtccaacgggaaccgccagctcgatg
tcgcaggacgactcggattcggacgtcccgtcctctccaaccggctccgatggacaggct
cacggcaacgggataaccccaaaaatggacactagcgaggaggataaacggtttcccgcg
tgcatccgagacgcagtgtctcaggtactgaacggatacgactggtcgctcgtaccgatg
cctacacgaggagaccggtctctgaaaaacaaaccccatgtgaagcgaccgatgaacgcg
ttcatggtgtgggcgcaggcggcgcgcaggaaactagctgaccagtacccgcatctccac
aacgccgaactcagcaagaccttggggaagctctggcgcctgctctctgaaagcgagaag
aggccatttatagaggaggcagagagactgagggtgcaacacaagaaagactaccctgac
tacaaataccaaccccggagaaggaagagcaccaagccaggtcagagtgactcggactcc
ggggctgagctggcccaattccacccaggccagatgtacaaggctgaacctggtctggcc
agactgacctccatggggaatgggcataatcatccagagcggacaggccatccacatggt
ccccccacaccccccaccacccccaagacagagctgtatcttgggctgaaacatgagggc
cggcgccacctggatgggggacggcagaacatcgacttcagcaacttggacatctctgag
ctgagcaccgatgtcatcagcaacatggatgcctttgacgtccacgagttcgaccagtac
ctgccactcaacgggcacagctccgccccggcgcctccggaccacgggcacagggggcat
ggatccaaccccccttctgggtccctcagttcctcctacggccactcccacagcaatgcc
ttgccttgggggccaaaaggggcgggagcggaggcggcgctcccctcttcctcctcgtct
tctagtaccagcgatggcgttcaccacagaacgcagatcaaaacggagcagttgagtccc
agccactacagcagccagcactcccacagctcctcgccaccccaccccgactacaccccc
ctcagctctggaagcggcccctcctctgcagcctcctcatcctcctcctccctgcccagc
ccccagtgtgactacgcagacctccagagccccagctactacagtgcctactccagctac
cccgcaggtctctatcagtacccctacttccactcctctcgccgcccctacggcaaaccg
ctcatcaacagcgtagccatccctccgccccacagccccacctcaaattgggagcagccg
gtctataccacactcaccaggccttag
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