KEGG   Salmo trutta (river trout): 115201114
Entry
115201114         CDS       T08542                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:stru03036]
    115201114
   03400 DNA repair and recombination proteins [BR:stru03400]
    115201114
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    115201114
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115201114
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N Sec7-like_HUS Adaptin_N
Other DBs
NCBI-GeneID: 115201114
NCBI-ProteinID: XP_029620270
Ensembl: ENSSTUG00000012882
LinkDB
Position
10:11931875..11954403
AA seq 1036 aa
MMAADSALLLGLVEEFVLGQQDRKAVDTATELKAGQFTILQLVEALGLHLTSSQPQTRAR
GVQLLSSVLQECHGDLTEREVEVLIVFYENRLKDHYVITPHVIQGLKALTKCSVLPPGSA
VSILKSLFQDIHVQSLMLAERSCVYNILIQLMESRESELKGLGADFVFGFVQSVDGERDP
RNLLLAFRIAGKIVREGYDLGKFTEELFEVTSCYFPIDFSPPPNDPHGITQEELVLALRA
VLTGTPRFAEFLLPLIIEKLDSDVQSAKVDSLQTLTACASVYEHKELAQFLPGLWASLRR
EVFQTASERVESAGLAAVGSLTACLSRSVLNSDSEDSLNVFLELVLKDCQHHLCEPDLKL
VWPSAKLLQATSTASYRASHRVAAAVLPSLIEQYNSRTQCAQRRTLLEVLQGFVHPVKSS
EEDESVLLDFRQSLCSVVFSALSESNADLQITSMRVLTALGQQTGLLLESDVELAVDHLT
RLILEEEDPKVSLAVVECAGALARLHPAAFISKMVPRLKEEIFSEPMAQGDSATQSQEHS
QQAVRQRCVAALAAVSSRPSLVQESTPVLLQVLTSAHTGTGAFSLEEVISVCHSLQKIAE
QAQDTEETGGVFHDIIPRLLGLALQAALQGSSDHRSPILEETVLSAMVPIISTTCARLQS
QLAGQTASRAVSLFLDGDVSFLPENAFPSQIQLLKAGDSRSQSQMVCLLMGCVCWLPRTV
EVPQMDRLLLELEELSCTSDHPLSYTSAAKCYAGLVNKSPAGEALDSLIDRMLKRISTEL
DSASSPVRTQAFTLLLWVSKALLLRYHPLSTALTDKLFSLLSDPELGSLAADGFSLLMSD
SQDVLNRGSHADVRIMYRQRFFTENSAKLVEGFNAAVQEKKSGYLKALSHIVNNLPRQVQ
LTELPALLPLLLEALSCPDQGVQVSTLSCLQPVLLDPPSTLITQLEVLVGRTLALTTSPT
MSVSEVCLTSSSQKVRIASLRCIHALSRFPEHEIMPFRARVLRALAAPLDDHKRVVRSEA
AVARNEWFLLGSPGGR
NT seq 3111 nt   +upstreamnt  +downstreamnt
atgatggctgcggatagtgccttgctattgggcttggtagaagaattcgttttgggacaa
caggaccgcaaggctgtagacaccgcaacagaactcaaggctggacagtttactatactg
cagttggtcgaagccttgggtttgcatctgaccagctcccaaccccagacccgagcccgt
ggtgtccagctcctctccagtgtcctacaggagtgccatggagaccttacagagagagaa
gtggaagtccttatagtgttttatgagaacagattgaaggaccactatgtcatcacacca
catgtcatacaggggctgaaagcgctgaccaaatgctcagtgttgccgcctgggtctgca
gtgtccattctgaaatcactattccaggacatccatgtgcagtccctgatgctggcggag
cggtcgtgtgtttacaacatcctcatccagcttatggaatccagagagtcagagcttaag
ggcctgggtgcagactttgtctttgggtttgtccagtcagtggatggggagagggaccca
cgtaaccttctcctggccttccgtatcgctgggaagattgtccgtgaaggctatgatctt
ggtaaattcacagaggagctgtttgaagtgacatcctgctatttccctatagacttcagc
cctcccccgaacgacccccatggcatcacccaggaggagctggtcctggccctgagggcc
gtgctcaccggaacaccacgctttgcagagttcctgctgccactgatcattgagaagctg
gactccgatgttcagagtgccaaggtggactccctgcagaccctgactgcctgtgcttct
gtgtatgaacataaagagctagcccaattcctaccaggcctttgggcctcgctgcgcaga
gaggtgtttcagacggctagtgagcgggtggagtccgctggcctagccgccgtcggtagc
ctgacagcctgtctctcccgctccgtcctcaactccgactctgaagactccctcaatgtc
ttcctggagctggtcctcaaagactgtcagcaccacctgtgtgagccggacctgaagctg
gtgtggcccagtgcgaagctgctgcaggccacctctaccgcctcctacagggcgagccac
agagttgccgccgccgtcctgccgtccctcatagagcaatacaacagccgcacacagtgt
gctcagcggcgcaccctactggaggtgttacagggcttcgtccatccggtgaagtcatca
gaagaggatgagagtgtgctgttggacttcaggcagtctctgtgcagtgtagtgttctct
gctctgtctgagagcaatgctgacctccagatcacatctatgcgtgtgctcactgctctg
ggccaacagacaggcctgctgttggagtcagatgtggagctggcagttgaccacctcacc
aggctcatcctggaggaggaagatcctaaagtcagcctggctgtggttgagtgtgcaggg
gctctggctcgcctgcaccctgcagccttcatctctaagatggttccacggctgaaggag
gaaatcttctcagagcccatggcacaaggtgacagcgccacacagtcccaggaacattcc
cagcaggcagtgcgtcagcgctgtgtggcggcgctggctgcggtgtcgtcccggcccagt
ttggttcaggagagcacacctgtcctgctacaggtcctcacctctgcacacactggcact
ggcgcgttctcactggaagaggtgatctctgtctgccacagtctgcagaagatagcggag
caggcccaggacactgaagagaccggtggcgtcttccatgacatcattcctcgcctgctc
gggctggcattgcaggcagctttgcagggttcttcagaccatcgtagcccgatactggag
gagactgtcctatcagccatggtacccatcatcagcaccacttgtgcccgactacagtcc
caactggctggccaaacagcctcgcgggccgtgtccctcttccttgacggtgatgtttcc
ttcctgccagagaacgccttcccctcccagatccagctcctcaaggcaggtgactcccgg
agccagtcccagatggtgtgtctgctcatgggttgtgtgtgctggctgccacggactgtg
gaggtgccccagatggacaggctactgttggagctggaggagctgagctgtacctctgac
catcccctctcctacacgtcagccgccaagtgctacgctgggctggtcaacaagagtccc
gcaggtgaagccctggactctctgatagacaggatgttaaagaggatctccactgagctg
gactctgcatcctccccagtcagaacgcaggcgttcactctgctgctctgggtgtccaaa
gctctccttctccgctaccaccctctgtccacagccctgactgacaagctcttctccctg
ctcagtgacccagagctgggttcgttagcggccgatggattctctctcctgatgagtgac
tcgcaggacgtcctgaaccgcggtagccacgccgacgtgcgcatcatgtaccgccagcgc
ttcttcacggagaactctgccaaactggtcgagggcttcaacgctgcagtccaagagaag
aagtctggctacctgaaggcactgtctcacattgtgaacaacctacccagacaggtccag
cttactgagctaccagcgctcttgcccctcctgctggaggccctgtcgtgtccggaccag
ggggtgcaggtgtctaccctgtcctgcttgcaacctgtcctcctggaccccccttcaacc
ctcatcacccagctggaggtgctggtgggccgcacactggcgctcaccaccagccctacc
atgtctgtgtctgaggtctgtctcacctcgtcttcacagaaagtgcggatagcctcactg
cgctgtatccatgccctctcccgctttccagaacatgagatcatgcccttccgtgcgagg
gtgctgcgtgccctggctgcccccctggacgaccacaagagggtggtgaggagcgaggca
gcggtggcccggaatgaatggttccttctggggagtccaggaggcaggtga

DBGET integrated database retrieval system