Salmo trutta (river trout): 115201118
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Entry
115201118 CDS
T08542
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115201118 (vps35l)
Membrane trafficking [BR:
stru04131
]
Protein recycling
Others
Retriever complex
115201118 (vps35l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
115201118
NCBI-ProteinID:
XP_029620278
Ensembl:
ENSSTUG00000013283
LinkDB
All DBs
Position
10:11967803..11983170
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AA seq
972 aa
AA seq
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MAAVQWHSRARRYESELQSCGLEVAPVEFSDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSMFAAASASESPLTLSQSSSTGDLGRGKRREKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSDKGKAPSLASSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYERIWSMCSDPRPLPDPCPDSFTADEVNDTAKETCLNWFFKIASIRELI
PRLYVEVALLKCNRFLTKCGIQETVPRLTAMIRGIGDPLVAVYARAYLCRIGMEVAPHLK
DSLNKNFFDLLGTFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAIHWILQCVSYRAPEALL
TEMMERCKKLGNNALLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPKHLLFGSLGRS
LACADPPEAERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLSDIIK
HMTPDRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVEVCRSIMD
VFIKHQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSFGRDFE
QQLSFCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFIT
IPSLTSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSISIEGKLRSSEGF
LLDFINNFLSALLVVPDHPEAGVLFLVRGLLNMVQDYTWEDNSDAKVQVYISALPLLAAM
SQESYLYSIPKVDSNETLYGGDPKFLAEINKLCETLIGQVLDHLKTLGRDESVHRQGSLA
FSLFGCLLSHGDLRNNKLNQLAVNLWNLSHKQGYCNTRTSVRTLEFIKHQAQQPDMAHLS
DMLQRLTLQSRT
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcaggtatgagtctgaactgcagagctgt
ggcctggaggtcgccccagtggagtttagcgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacctcctcctcttcctcctct
tccagctctgtggcaccagatcccctgagctccatgctggatggaacggaccccctgtcc
atgtttgctgcagcctctgccagcgagtcccccctaaccctctcacagagcagctccact
ggggacttgggtagaggaaagaggagggagaaggaggatgaggttggagtggactttgaa
ccgtggtcatccaaacggggagaaatccttgccaggttcactaccacggagaagctctcc
attaatctcttcatgggctcagataaaggcaaggctcccagtcttgcctcctctgctgta
tcggagaaggtgcgaactcgcctagaggagctggatgacctggaagaggggtctcagcgg
gagctgctgaatctgtcccagcaggactatgtgaaccgtatcgaggagctcaaccagtct
ctaaaagaggcctgggcctctgaccagaaggtcaaggccctcaagatcgtcatccagtgc
tccaagctgctgtcagacacagccgtgattcagttctacccaagcaagtttgtcctcatc
acagacattctggacacctttggacgtctggtgtatgagaggatctggtccatgtgttct
gaccctcgccccctaccagatccctgtccagactcctttacagctgatgaagtgaatgac
acggccaaggagacctgcctcaactggttcttcaaaattgcctccatcagagaactcatc
cctcgactatatgtagaggtagctctcctgaagtgtaaccgtttcttgaccaagtgtggg
atccaggagacggtgcctcgcctcacagctatgatccgggggataggggaccccctggtg
gccgtgtatgcccgggcctacctctgtaggattgggatggaagtggctcctcacctgaag
gacagcctgaacaagaacttctttgacctgctggggacgttccgtcagatccacggcgac
agtgtccagaaccagctggtcctgcagagggtggagatccccgtctacctgaccctctac
tcccccgccatccactggatcctgcagtgtgtctcctacagagcaccagaggccctgcta
acagagatgatggagaggtgcaaaaagcttgggaataatgccctgctgctgaactcggtg
atgtgggcgttcagggcggagtttatcgcgacgagagccaccgacttcatcggcatgatc
aaggactgtgatgaggcaggattccctaagcacctgttgtttggctctctgggccgcagt
ctggcctgtgctgaccctcctgaggcagaaaggctgcccatcctcaatgaggcctggaag
gtcatcaccaaagtgcgaagtccacaggattacatcaactgtgctgagatctgggtggag
ttcacctgtcgtcacttcactaaacgtgaggtcaacactgtgctctctgacatcatcaag
cacatgaccccagaccgggcctttgaggatgcctatcctcagcttcagtccgtgatacgg
aagatcctcacctactttcatgacttctctgtcctcttctccatggagcgtttccttccc
ttcatggacatgttccagaaggacagcgtcagggtggaggtgtgtcgctccatcatggac
gtgttcatcaaacaccagcaggagcccactagagatcctgtcatcctcaatgctctactc
cacgtctgcaagaccatgcacgactctgtcaatgctctgacgctggaggatgagaagaga
tctctggccttattgatcaatggcttcatacgcatggtgtcgtttggccgtgactttgag
cagcagctgagtttctgtgtggaggcccgggccaccttctgtaacctggagccagtgctg
gtgcagctcatccacactgtgaaccagctggccatggagacaaggcgtgtgatgaggggg
agccactcccgcaagactgctgcttttgtcagggcatgtgcagcatacagcttcatcacc
attccctccctcaccagcatcttcagccgcctcaacctctacctgctgtctgggcaggtg
gccctggccaaccagtgtctttcccaggcggatgcattcctgaaggcagcggtcagtgtg
ttgccagaggtgccacgcagtatcagcatcgagggcaaactgcgctcttctgagggcttc
ctgcttgacttcatcaacaacttcctgtcagcactactagttgtgccagaccacccagag
gcaggggtgttgttccttgtgcgtgggctgctcaacatggtgcaggactacacctgggag
gacaacagtgacgccaaggtccaagtctacatcagcgccctgccactactggctgccatg
agtcaggagagctacctctattccatccccaaagtggactcgaatgaaacactttatgga
ggagatcccaagtttttggcagagatcaacaagttatgtgaaactctgattggacaagtg
ctggaccacctcaagaccttgggtagagatgagagtgttcatagacagggtagtctggcc
ttctctctgttcggctgcctcctgtctcatggggacctacgcaacaacaaactcaaccag
ttggctgtcaacctgtggaatctgagccacaagcagggctactgcaacacacgcacctct
gtgcggacactagagttcatcaagcaccaggcccagcagccagacatggctcacctctca
gacatgcttcaacgcctcaccttgcagtccaggacctga
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