Salmo trutta (river trout): 115201182
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Entry
115201182 CDS
T08542
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
stru
Salmo trutta (river trout)
Pathway
stru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115201182 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115201182 (msh2)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115201182 (msh2)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
115201182
NCBI-ProteinID:
XP_029620445
Ensembl:
ENSSTUG00000035661
UniProt:
A0A674CFS9
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Position
10:complement(15025798..15046188)
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AA seq
929 aa
AA seq
DB search
MAVQPKQSLSMDAAAEHGFLTYYFSMPEKPDTTFRVFDRGDYYTVHGTDALFAAKEVFKT
NGVIKTLRSGSRKLESVVLSKTNFEALVRDLLLVKQYRVEVYRNQSKTKDHSWQLEYKAS
PGNLSQFEEVLFGGAEGRGAGSAGVVAVRLAVGGDGQRVVGVGYVDASLRTMGVCEFLDG
ETFCNLEALLVQLSPKECLLPQGDNTDKIRQVVQRGGVLLSDRKRTEFSSKDMTQDLNRL
LRTRKGEANACNVLPELDKQVAMSCLAAVVRYLELLSDQSNFSSFSLTTLDLSQYMRLDN
AAVQALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLDLVE
CLVNDGEARQTLQDDLLRRFPDLHRLSKKFHRLSATLQDCYRGYQAVGQIPALLLALEKH
QGSHQMLLEAVFISPLRDLQADFIKYQEMIETTLDMNQVEHHEFLVKASFDPVLSELREK
MDTLENSMQSVLNSAARELGLDAGKTVKLECNSVLGYYLRVTCKEEKSLRNNKTFTTLDV
QKNGVRFTNSKLSSLNEDYTRNREEYEEAQNAIVKEIISIAAGYVDPLQSLSDVLAQLDA
VVSFSVASVSAPVPYVRPRLLAADGRRLELQQARHPCLESDADTAFIPNDISFIQGEQSF
YIITGPNMGGKSTFIRQVGVISLMAQIGCFVPCEKAELSMIDSCLCRVGAGDSQLKGVST
FMSEMLETAAILRSATKNSLIIIDELGRGTSTFDGFGLAWAISEHIASKIGCFCLFATHF
HELTALATHHPTVRNLHVTALTTQHTLTMLYRVKPGVCDQSFGIHVAELACFPPAVVAMA
KQKAAELEEFQEEPSEEEGPEAKKRRSDKREGEALIQSFLEKAKSLPAVTMTDQEVKAEL
KAMKQELVAHNNAYITELLARSAPIHTTV
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaaccgaaacagagcttgtccatggacgctgctgccgaacatggcttcctt
acctactacttttccatgccggagaagccagacaccaccttcagggtcttcgaccggggt
gactactacacggtgcacgggaccgacgcgctgttcgccgccaaggaggttttcaagacc
aacggagtcatcaagaccctgcgctcaggtagccgcaagctggagagtgtggttctcagc
aagacaaactttgaggctctggtcagagacctgctgctggtgaagcaatacagagtggaa
gtctacaggaaccaaagcaaaaccaaggatcacagctggcaactggagtacaaggcgtct
ccagggaatctgagccagtttgaggaggttctatttggcggggctgagggaagaggggct
ggctcagcgggggttgtggccgtacggttggctgtcgggggtgacggacagcgcgtggtg
ggcgtgggctatgtggacgcgtccctaaggaccatgggagtgtgcgagttcctcgatgga
gagactttctgtaacctggaggctctacttgtgcagctgagccctaaagaatgtctgcta
ccacagggtgacaacactgataaaatacgacaggtggtgcagcgtggcggtgtgttgctg
tcagacagaaagagaacagagttcagtagtaaagacatgacccaggacctcaaccgactg
ctacggaccaggaaaggggaggccaacgcctgcaacgttctgccggaactagacaaacag
gtagccatgtcatgcctggcagcagtggttcgttacctggagttgctgtctgaccaatca
aacttcagctccttcagcttgacgacccttgacctgagccagtacatgaggctggacaac
gctgctgtacaggccctcaacctctttcagggttcccccgatgacaccagtggagcccac
tcattggccgggctactgaataagtgccgcacccctcagggccagcgattggtcaaccag
tggatcaaacagccgctcatggacaagaacaggattgaggagagactggatctggtagag
tgtctcgtgaatgacggtgaggccagacagactcttcaggacgatctgttgcggcggttc
ccagatctccaccgcttgtccaaaaagtttcaccggctctcggcaacactgcaggactgt
taccgcggttaccaggccgtgggccagatccctgcacttctgttggctctggagaaacac
caaggaagtcaccagatgctgctggaggcagtgttcatctctcctctcagagacctgcag
gctgacttcatcaagtaccaggagatgatagaaactacactggatatgaaccaggtggag
caccatgagttcctggtgaaggcgtcgtttgacccggtgctctctgagctgagggagaag
atggacacactggagaacagcatgcagagtgtactgaacagcgcagcacgggaactgggt
ctggatgctggtaagacggtgaagttggaatgtaacagtgtgttggggtattacctgagg
gtgacctgtaaagaggagaagagtctgaggaacaacaaaacgttcacaacgctggacgtc
cagaagaatggagtccggttcaccaacagtaagctgagttctttgaatgaagactacacc
aggaacagagaggagtatgaggaggctcagaacgccatcgttaaggagatcatcagcatc
gccgcgggctacgtggaccccctgcagtcgttgagtgacgtcctcgcccagctggatgcg
gtggtcagcttctctgtggcgtcagtctccgcccccgttccctacgtcaggccacgcctc
ctggctgcggacggcaggcgcctggagctccaacaggccagacacccctgtctggagtcg
gacgcagacacagccttcatacctaatgatatatccttcatacagggggagcagagcttc
tatatcatcacaggtcctaatatgggcgggaagtctaccttcatcaggcaggtgggcgtg
atctctctgatggctcagattggctgctttgtcccctgtgagaaggcggagctaagcatg
attgacagctgtctgtgccgtgtgggggcgggggatagccagctcaagggcgtgtctaca
tttatgtccgagatgctggagaccgcagctattctccgctctgccacgaagaactctcta
ataataatcgatgagttgggtcgaggaacatctacattcgatggctttggtctggcctgg
gccatcagtgaacacatcgcctctaagattggctgcttctgtctgtttgcaactcacttc
cacgagcttacggcgttggccacacaccaccccaccgtccgcaacctgcacgtcacagct
ctgaccactcaacacacactcaccatgctctacagggtcaaaccaggtgtgtgtgaccag
agttttgggatccatgtggcggagttggcgtgtttcccgccggcggtggttgccatggca
aagcagaaggctgcagaattggaggagtttcaggaggagcctagtgaggaggaggggcca
gaggccaagaaacgacgcagcgataaacgggagggagaggcattgatccagtcgtttctg
gagaaggcgaaatctctgccggcagtcaccatgactgaccaggaggtgaaggcggagctt
aaagccatgaagcaggagcttgttgcccataacaacgcttacatcactgagctcctggca
cgctccgcccctatccacacaaccgtgtga
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