Salmo trutta (river trout): 115201233
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Entry
115201233 CDS
T08542
Name
(RefSeq) lethal(2) giant larvae protein homolog 2 isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115201233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115201233
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115201233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_VPS8
Beta-prop_WDR3_2nd
DSE1_N
Nullo
Motif
Other DBs
NCBI-GeneID:
115201233
NCBI-ProteinID:
XP_029620546
LinkDB
All DBs
Position
10:complement(17366145..17396389)
Genome browser
AA seq
1011 aa
AA seq
DB search
MKRFRRHGQESQRERIKQELYGFNKTVEHGFPHQPSALGFSPSLQLLAIGTRSGAIKLYG
GPGVEFMGLHDENAAVTQVHFLPHQVELVTLLDDNSLHMWTLRAHHGVSELLEIGRFTLT
GPPGAPPSVTRVTAVLAHSSGDLLLLGTEGGHVFVVKVPGFRELEERNISLEKVTNGVPE
EYGGRRSLEHVESLQENPVNPLQVLIGYGRGLMVIWDLDSQSAVKHIPATQQLESVWWME
DGGHVLSSHSDGSYCRWKVAGDDPQSEQEKSEVPYGHFPCKAISKIIQLPTEQGPPFLFL
SGGMPRASYGDRHCISVIHSKTHVALDFTSRIIDFFVIRDGPDHTGDPSALVVLVEEELV
VIDLQTEGWPVIQTPYLVPLHCSAITCSHHVSAIPLKLWERVLSAGALQNTHYSKKPWPM
TGGQNLAPDPPQRDLLLTGHEDGTVRFWDASGVCLYPMYKLSTAGVFLTDSDPNDNLNQG
TEGEWPPFRKVGCFDPYSDDPRLGIQKIHLCKYSGYLTVAGTAGQILVLELNDEAAEQTV
EATVADLLQGQEGFRWKGHTRLEVREEPVTFPPGFQPFALVQCQPPAVVTALTLHSEWKL
VTFGTSHGFGLYDYQQKNNVLVRCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRV
SLRKHHVNNAAKLQQANARLEAELAEMELAPVQRKIEPRSPDDSFTGLVRTLYFADTFLS
DSSHNTPSLWAGTNGGSVFAYQLRLPPVERRGEDPVTAHPAKEIQLMHRAPVVGILVLDG
HGSPLPEPLEVAHDLARSPDMQGSHSLLVISEEQFKVFTLPKVSAKMKLKLTAIDGSRVR
RVGVAWFGSTRTDDYGESGLTVLTNQGDLHVVSLPGVKLQVQYPCIRREDVSGIASCVFT
KHGQGFYLISPSEFERFSLSARCVVEPRSLVEVSSQTPSTTLPRAPPDGASVERRNSTRD
GVESSARRVMEHALLNDETVLQEIQKSLEVDQTTFLENGTSALAGGKVLSN
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtttaggagacacggccaggagtcccagagagagcggatcaaacaggagctc
tacgggttcaacaagacagtggagcatggttttcctcaccagcccagtgctctgggcttc
agccccagtctacagctcctggccatcggcacacgctccggagccatcaaactttacggt
ggcccaggtgtagagttcatgggtctacacgatgaaaacgctgccgtcacccaggtgcac
ttcctgccacaccaggtggagctggtgactctgttggatgacaacagtctccacatgtgg
accctcagagctcaccatggtgtctctgagctgctggagataggacgcttcacactcact
ggacccccgggtgctccccccagtgtaactcgtgtaacagcggtgctagcccactcttct
ggggacctgctgttgctaggaacagagggaggacacgtgttcgtagtgaaggtaccaggc
ttcagagaactagaggagaggaacatcagcctggagaaagtcaccaacggtgtaccagag
gagtacggaggtcgtaggagcctggagcatgtcgagtccttacaggagaatcccgtcaac
ccactccaggttctgattggctacggacgaggcctcatggtcatctgggacctggacagc
caatcagccgtcaaacacatccccgctacacagcaactggagagcgtgtggtggatggag
gacggtggccatgttctcagttcccatagcgacggcagctactgccgctggaaggtggct
ggggatgacccacagagcgagcaggagaagtccgaagtaccgtacggccacttcccctgt
aaggccatctctaaaatcatccagctgccgacagaacaggggcctccgttcctgttcctc
agtggtggcatgccccgggccagctacggagacagacactgtatcagtgtgatccacagt
aaaacacacgtggctctggacttcacctccagaatcatcgacttctttgtcatcagagac
ggaccagaccatacaggcgaccccagtgcattggtggtcttagtagaggaggagttggta
gtgatagatcttcagactgaagggtggccagtcatccagactccgtacctggtccctctc
cactgctctgccatcacctgctcccaccatgtctctgctatacccctgaagctgtgggag
agggtcctgtctgccggagcgttgcagaacacacactactctaagaagccgtggcctatg
acaggaggacagaacctggctccagacccccctcagagagacttactgctcacagggcac
gaggacggtacggtgcgtttctgggatgcgtcgggggtgtgtctgtaccccatgtacaag
ctgagcacggcaggggtgttcctcactgactcagaccccaatgacaacctgaaccagggc
acagagggagagtggccacctttcagaaaggtgggttgttttgacccgtacagtgacgac
cctcgtctcggcattcagaagatccacctgtgtaaatacagcggctacctgactgtagct
ggcactgctggacagatcctggtgttagagctgaatgatgaggcagcagaacagactgtg
gaggccaccgtagcagacctgctacagggacaggagggcttccgctggaagggccacacg
cgtctggaggtgagggaggagccggtgacgttccccccaggtttccagccctttgccctg
gtccagtgtcagcctccggccgtggtcactgccctcaccctgcactctgagtggaaacta
gtaacattcgggaccagccacggcttcggactctacgactaccagcagaaaaacaacgtt
ctcgtcaggtgtactctgaaccccagtgaccagctggctatggaaggtcctctgtctaga
gtgaagagcattaagaagtctctccgccagtccttcagaaggatcaggcgcagccgagtg
tcgctacgcaaacaccacgtcaacaacgcagctaagttgcagcaggccaatgctcgtcta
gaggcagagctagctgagatggagttggcgcccgtccagagaaagatagagcctcgatcc
cctgacgactccttcaccggcctcgtgcgcacgctatacttcgctgacaccttcctttca
gacagctcccacaacacaccctctctgtgggcagggaccaatgggggatcagtattcgcc
taccagctccgcctaccgcctgtggaacgcagaggagaggaccctgtcacagcacaccct
gctaaggagatccagttgatgcaccgtgctccagtagtgggcatcttggtgttggatggc
catggttcccctctgcctgagcccctggaggtggcacacgacctggcccgctcacctgac
atgcagggttcacacagcctgctggtcatatcagaggaacagttcaaggtgttcaccctg
ccgaaggtgagcgccaaaatgaagttgaagctgacggccattgacggctcacgcgtgcgc
cgggtgggcgtggcctggttcggcagcacccgcacggacgactacggcgagagcggcctc
accgtcctgaccaatcagggagacctccacgtggtgtcgttgccgggggtgaaattgcag
gtccagtacccctgtatacgtagggaggacgtcagcggcatcgcatcctgcgtcttcacc
aagcatggacagggtttctacctgatctctccgtcagagtttgagcgtttctctctgtct
gctcgctgtgtggtggagccccggtctctagtggaggtgtcctcccagacacccagcacc
actctgccacgggcgccgccggacggggcctctgtggagcgcagaaattccacgagggat
ggcgtggagagctctgctagacgtgtgatggagcatgctttgctgaatgacgagactgtg
cttcaggagatccagaaatctctagaagtagatcagacgacgttcctggagaatgggaca
agtgctctcgctggagggaaggtgctgagcaattga
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integrated database retrieval system
