Salmo trutta (river trout): 115201253
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Entry
115201253 CDS
T08542
Name
(RefSeq) integrin beta-4-like isoform X1
KO
K06525
integrin beta 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115201253
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115201253
09142 Cell motility
04820 Cytoskeleton in muscle cells
115201253
04810 Regulation of actin cytoskeleton
115201253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115201253
04515 Cell adhesion molecules [BR:
stru04515
]
115201253
04090 CD molecules [BR:
stru04090
]
115201253
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115201253
Exosomal proteins of bladder cancer cells
115201253
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115201253
CD molecules [BR:
stru04090
]
Proteins
115201253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
PSI_integrin
Ig_DSCAM-DSCAML_C
EGF_Teneurin
I-EGF_1
EGF_2
EGF_integrin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
115201253
NCBI-ProteinID:
XP_029620586
Ensembl:
ENSSTUG00000049169
UniProt:
A0A674ERR3
LinkDB
All DBs
Position
10:complement(18459321..18486764)
Genome browser
AA seq
2008 aa
AA seq
DB search
MREMGRWTLNLMVGVVLLAVLTASCYAEKVNHCLATRASTCSECIQSGKGCAYCPDEIFD
GPRCDLHENIINHGCKSAVTAKSSMSMERNEQINMLLKQSQVAPQEMSMTLLPGEEREIE
MEVFEPAKGPLDLYILMDFSNSMEDDLDNLKRMGAELAALVGKLSDDYTIGFGKFVDKVV
EPQTDMRPSKLAKPWPNSDPPFSFRHVITLTSDLRSFTEKLQKERISGNLDAPEGGFDAI
LQAAVCGEKIGWRSHATHLLVFSTESAFHYEADGANVLAGIMPRNDEQCHLDPNGKYTED
TRQDYPSVPTLVRLLGKHNIIPIFAITNHSFTYYQKLYEYFPIAELGLLQEDSANILNIL
EKAFENIRSKISIRAEDKPKAIEAQVLSYSGSVAQAGTFKVKPGQIGKFKVRVKASEMVG
EQHVCSLEQGDKKGKMRVKPTTFSTALNINAEVLCKTCDCEKTPTENAARCTGHGDLVCG
KCRCYVGWLGPFCNCSTSASPVAGSSCLGPDVGEPCSGRGDCLCGTCVCYNTDQYEGPLC
QFDKSQCQRYGGFLCNDRGRCFMGQCACAEGWEGPACECPMSNQTCLDTKGGVCNGRGVC
KCGRCECQDSGLAMTPTCEANFQAQLGMCEDKRSCVQCQAWKTGEKKDSSQCDQCKFKVV
MVDELKENKEVIEACSFRDEDDDCTYHYTVDYPEDQADKELEVQVLKKKDCPPAGFLWLI
PLIMFLMLLLGLLLLCCWKYCACCKACLALLPCCGRGRMVGFKEDQYMLRQSLLTSDHLD
TPLVRTGPPKSTDVVRWKITDNVHRLPNHPLAKVQPNPKETIQFPLSLRLNRLFTESLSH
PDARDTEMLRREVDDNLNEVYKNVPGAQRVQKTKFRLQRNAGKRKDHTIVDTVVSAPRSS
YPDIVKLTEKNVQSGNFQDLKVVPGYYTVATDKEAAGAVEFQEGVEMVDVRVPLFIKEDD
DDKKQLQVEALDVPLGIAEIGKRFVNITIIKEHAKSIMTFLQPSYTYSRQDGVANIPISR
EIIEDGHTQVTYRTRDLTAKDKKDYVTVDGELSYGPGETQKTVPVRLLELGEGDGLLKDT
QVKQFVMDLTNPRQGAKLGRYPRTTVTITDQPEPSVVMFMKSTQSFSTADPTYSIPVVRT
RNQEGPATVHWKTRNAKRFELSGPLKFGPGETEKNIVIDPRPHPGPVKPEIFQLELFDPS
TNAAVGERKTTMVTVTDGEIAQKQQQGKEFINQTGMSPGGRLFSPTNVKAKATGPRNIRL
NWDPLGNPLGYKVKYWIYGDPETDEQVIDVKTTHAELTNLYPFCDYEMKVCGYNALGNGN
YSDMVPCRTLEDVPSEPGRLAFNVISPTVTQVSWAEPAETNGVITNYEVLYTPINDDTKP
MGVAKKVKIDNPKKRMLLIENLQSAQTYCYKVRAKNSVGWGPFREATINLASQPVRPMSI
PIIPDIPIVDAEAGDEYDGYLMYSSEVLRSPTGSKRPSVSDEDQMNGRWEQNFLFPGGNN
SMSRSANMSSSSYSQLSPMSTLSSNHRGGAGGSMTTDSSTTYLSGQGGNSLSRTQIIGGG
MRTENVVMRKRSENRGYYEYDDNIRDSIVIGDLSSGLSGYTDGKSTYGFSPTQTQYSYSM
SQVLRGRTQSEDVNDALLNLDRVLQDSRLAPGVPDTPTRLVFSALGPTALKVSWQEPHCD
RDVLGYCVLYQLLNGGDMKRIDVSSPADNSVVVQDLLPNHSYLFKVKAQSLEGWGPEREG
VITIESAVNPNSPLSPMPGSPFTLSTPSAPGPLVFTALSPEALQLSWEKPRKPNGDILGY
VVTCEQLHGGGDMRSFQVSGNSAETSLTVPDLCENMPYKFKVQARTTQGFGPEREGIITI
ESQDGGSTSQIGGIGGMSQLGGLGGMSQLGGLGGMSQLGGLGGMSQLGGLGGMSQIEGLG
GMSQYSSQSLTKRGVFQLPTEVSTHSNVTHTMINDPYFSGDGMMMTSQHTETSGMVTRHV
TKEVVQRSMQVAGSSSVTKKVERSFYEA
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatggggagatggacattaaatctcatggtgggggttgtacttcttgctgtc
ctcacagccagttgctacgctgaaaaagtgaatcactgtctggctacgagggctagcacc
tgttcagaatgtattcagtcagggaagggctgtgcctactgtccagatgagatctttgat
ggaccccgctgcgaccttcatgagaacatcataaaccacggctgtaaaagcgcggtgaca
gccaaaagcagtatgtcgatggagagaaacgagcagatcaacatgttgttgaagcagtcc
caggtagctcctcaggagatgtctatgactctgctgccaggggaggagagggagatagag
atggaggtgtttgaaccagctaaaggacctctggacctctacattcttatggacttctcc
aactccatggaggacgatctggacaacctcaagagaatgggtgctgagctggctgcgttg
gtaggtaagctgtctgatgattacaccatcggtttcggcaagtttgtggacaaagtggtg
gaaccccagacagacatgagaccatccaaacttgccaagccttggcccaacagcgaccct
cccttctcgttccgtcatgtgatcactctgacctctgacctgcggtccttcaccgagaaa
ctgcagaaggagaggatctcagggaacctggacgctccagaggggggctttgacgccatt
ctgcaggctgcagtctgcggggaaaagatcggctggcgtagccatgccacccacctcctg
gtcttctccaccgagtcggccttccactacgaggcggacggtgccaacgtgctggcgggc
atcatgccacgcaacgacgagcagtgccacctggaccccaatgggaaatacacagaggac
accaggcaggactacccctctgtgcccaccctggtccgcctgctgggcaaacacaacatt
atccccatcttcgccatcacaaaccactcctttacctattatcagaagctttatgagtat
ttccccatcgctgagttgggtctgctacaggaagactctgctaacatcctcaatatcctg
gagaaagcctttgagaatatccgttctaagatcagtatccgtgctgaggacaagcctaaa
gctatagaagctcaggtcctgtcatacagtggcagtgttgcgcaggctggaacattcaaa
gtcaagcctggacaaatagggaagtttaaggtgcgtgtcaaggccagtgagatggttggg
gagcaacatgtgtgtagtctggagcagggtgacaaaaaggggaagatgagagtcaaacca
acaaccttcagcacagctctaaacatcaacgccgaagtgctctgtaaaacctgcgactgt
gagaagactcccactgaaaatgcagcgcggtgtacaggccacggggacctggtctgtggg
aagtgccggtgctacgttggctggctgggtccgttctgtaactgctcaaccagtgcgtcg
ccggtcgcaggtagttcctgtctgggtcctgacgtgggggagccgtgttctggccgagga
gattgcctgtgtggaacgtgtgtgtgttacaacaccgaccagtacgagggacccctctgt
cagtttgacaagtcccagtgtcaacgatacggaggcttcctctgcaacgaccgtggtcgt
tgcttcatgggccagtgtgcgtgtgcagagggctgggagggaccggcctgtgagtgtccc
atgagcaaccagacctgtctggacactaaagggggtgtctgtaacgggcgtggcgtgtgt
aagtgcggtcgttgtgagtgccaggactctggcctggccatgacccccacctgtgaggct
aacttccaggcccagctggggatgtgtgaggacaagaggagctgtgttcagtgtcaggcc
tggaagacaggagagaaaaaggacagcagccagtgtgaccagtgcaagttcaaagtggtc
atggtggacgagctcaaggaaaataaagaggtgattgaggcgtgtagtttccgtgacgag
gatgacgactgtacgtaccactacaccgtggactacccagaggaccaggctgacaaggaa
ctggaggtccaggtgctcaaaaagaaagactgtccccctgctggcttcctgtggctgatc
cctctcatcatgttcctcatgttactgctgggtctactgctgctctgctgctggaagtac
tgcgcctgctgcaaggcatgtcttgctctactgccatgctgtggaagaggccgtatggtt
ggctttaaggaggaccagtacatgctccgccaatccctgctcacctctgaccacctggac
acgcccctagtgaggaccggcccgcctaagagcaccgacgtggttcgctggaagatcacc
gacaatgtgcaccgattgcccaatcacccgctggcgaaggtccagcccaaccccaaagag
accatccagttccctctgtccctgcgtctgaacaggttgttcacagaaagtctgtctcac
cccgacgccagagacacggagatgctacgcagggaggttgatgacaacctgaatgaagtg
tacaagaatgttcctggagcccagagggttcagaagaccaaatttagattacagagaaat
gctggtaaaagaaaagaccacacaattgtcgacacagtcgtgtccgctcctcgctccagc
taccccgacatcgtcaaattgactgagaaaaacgtccagtctggaaacttccaagacctc
aaagtggtgccgggctactacacagtggccacagacaaagaggcggctggcgccgtggag
ttccaggagggggtggagatggtggatgtgcgcgtgccgctcttcatcaaggaagatgat
gatgataagaagcagctgcaggtggaggcattggacgttcctctgggcatcgctgagata
gggaaacgcttcgtcaacatcaccatcatcaaagaacacgccaagagtattatgacattc
ctccagccttcctacacctacagccgacaggacggagtggctaacatccccattagcaga
gagatcatagaggacggacacacacaagtcacctaccgcacccgagacctcaccgccaag
gacaagaaggactatgtgacagtggatggggaactgtcctacgggccaggggagacccag
aagactgtccctgtgcgtctattggagctgggagagggagacggtctgctgaaggacaca
caggtcaaacaatttgtcatggacctcactaacccaagacagggagccaagctgggacgc
taccccagaaccaccgtcaccatcactgaccaaccagagcccagtgtggtgatgtttatg
aagagcacccagagcttctccacagctgacccaacctactccatccccgtggtccgcacg
cgcaaccaggaggggcctgccaccgtccactggaagacccgcaatgccaagcgcttcgag
ctgtccggtcccctcaagtttggtcccggggagactgagaagaacatcgtgatcgaccca
cgccctcaccctggaccggtcaaaccggaaatcttccagctggagttgtttgaccccagt
acgaacgctgcggtcggggagaggaagacgacaatggtcacggttactgacggagagatt
gcccagaagcagcagcagggtaaggagttcatcaaccagacaggcatgtctcctggtggt
cgtctcttctctcccaccaacgtgaaggctaaagccactggcccacgaaacatccgtctc
aactgggaccccttaggaaaccccctgggctacaaggtgaagtattggatctatggggac
cctgagactgatgagcaggtgatagatgtgaagaccacccacgctgagctgaccaacctg
taccccttctgtgactacgagatgaaggtgtgtggctacaacgccctgggaaacggaaac
tacagcgacatggtgccctgtcggaccctggaggacgtccccagtgagcctggtcgtctt
gcgttcaacgtcatcagtccaactgtcactcaggtcagctgggcggagcctgccgagacc
aacggtgtcatcaccaactacgaggtcctctacacacccatcaatgacgacacaaagccg
atgggtgtagctaagaaggttaagatagacaaccctaagaagaggatgttgctaattgag
aacctgcagtcggcccagacctactgttataaggtccgggctaagaacagcgttggctgg
ggtccattccgagaggcaaccatcaacctggcctcacagcccgtcagacccatgtccatc
cctatcatcccagacatcccaatagtggacgcggaggcgggggatgagtacgacggctac
ctgatgtacagcagtgaggtcttgaggtcgccaacaggctccaagagacccagcgtctca
gacgaagaccaaatgaacgggaggtgggaacaaaacttcctgttccccgggggaaataat
tccatgtcgcgcagtgccaatatgtcttcttccagctacagccagctgtctcccatgtcc
accctcagctccaaccacagaggaggggccgggggttccatgactacggattcctccaca
acatacctctctggacaaggaggaaactcgctctcccgcacacagattatcgggggcggg
atgcgcacagagaatgttgtcatgagaaagcggtcagagaacagaggttactatgagtat
gacgacaacatccgagactccatcgtcataggagacctgtccagtggattgtcgggatac
acagacggcaaaagtacgtatggcttcagccccactcagacacagtacagctacagtatg
tctcaggtcttgcggggcaggacccagtctgaggatgtcaacgatgcgctactgaatctg
gacagggtgctccaggactctcgtttggcccctggggtccctgacacccccaccaggttg
gtgttctctgccctgggccccacggccctgaaggtcagctggcaggagccccactgtgac
agggatgtgctggggtactgtgtcctctaccagctactcaatggaggtgatatgaagcgt
atagacgtgtccagcccagcagataactctgtggtggtgcaggacctgctgcctaaccac
tcctacctgttcaaggtgaaggctcagagtctggagggctggggaccagagagggaggga
gtcatcaccatagagtcagccgtcaaccccaacagcccactcagtccaatgccaggttct
cccttcactctcagtacccccagtgctccaggccccctggtgttcacagctctgtcccct
gaggcactgcagctgagctgggagaaaccccgcaaacccaacggagacatcctgggctac
gtggtcacctgtgaacagctgcacggaggaggtgacatgcgttccttccaggtgagcggt
aacagcgctgagaccagtctgacggttccggacctgtgtgagaacatgccgtacaagttc
aaagttcaggccaggacgacccagggcttcgggcccgagagggagggcatcatcaccatc
gagtctcaggatgggggtagcacgtctcaaataggtggaataggaggtatgtctcaacta
ggaggcctaggtggtatgtctcaactaggaggcctaggtggtatgtctcaactaggaggc
ctaggtggtatgtctcaactaggaggcctaggtggtatgtcccaaatagaaggcctagga
ggtatgtctcagtacagcagtcagtccttgaccaagagaggtgtgttccaactgccgaca
gaggtcagcacccacagcaacgtcacacacaccatgatcaacgacccctacttctcagga
gacggtatgatgatgacgtcccagcacacagagaccagcggcatggtaacacgtcatgtg
actaaggaggtggtccagaggagcatgcaggtggccggctccagcagcgtcaccaagaag
gtcgagaggtcgttctatgaggcctga
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integrated database retrieval system
