Salmo trutta (river trout): 115201253
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Entry
115201253 CDS
T08542
Name
(RefSeq) integrin beta-4-like isoform X1
KO
K06525
integrin beta 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04382
Cornified envelope formation
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115201253
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115201253
09142 Cell motility
04820 Cytoskeleton in muscle cells
115201253
04810 Regulation of actin cytoskeleton
115201253
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115201253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115201253
04515 Cell adhesion molecules [BR:
stru04515
]
115201253
04090 CD molecules [BR:
stru04090
]
115201253
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115201253
Exosomal proteins of bladder cancer cells
115201253
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115201253
CD molecules [BR:
stru04090
]
Proteins
115201253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
PSI_integrin
Ig_DSCAM-DSCAML_C
EGF_Teneurin
I-EGF_1
EGF_2
EGF_integrin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
115201253
NCBI-ProteinID:
XP_029620586
Ensembl:
ENSSTUG00000049169
UniProt:
A0A674ERR3
LinkDB
All DBs
Position
10:complement(18459321..18486764)
Genome browser
AA seq
2008 aa
AA seq
DB search
MREMGRWTLNLMVGVVLLAVLTASCYAEKVNHCLATRASTCSECIQSGKGCAYCPDEIFD
GPRCDLHENIINHGCKSAVTAKSSMSMERNEQINMLLKQSQVAPQEMSMTLLPGEEREIE
MEVFEPAKGPLDLYILMDFSNSMEDDLDNLKRMGAELAALVGKLSDDYTIGFGKFVDKVV
EPQTDMRPSKLAKPWPNSDPPFSFRHVITLTSDLRSFTEKLQKERISGNLDAPEGGFDAI
LQAAVCGEKIGWRSHATHLLVFSTESAFHYEADGANVLAGIMPRNDEQCHLDPNGKYTED
TRQDYPSVPTLVRLLGKHNIIPIFAITNHSFTYYQKLYEYFPIAELGLLQEDSANILNIL
EKAFENIRSKISIRAEDKPKAIEAQVLSYSGSVAQAGTFKVKPGQIGKFKVRVKASEMVG
EQHVCSLEQGDKKGKMRVKPTTFSTALNINAEVLCKTCDCEKTPTENAARCTGHGDLVCG
KCRCYVGWLGPFCNCSTSASPVAGSSCLGPDVGEPCSGRGDCLCGTCVCYNTDQYEGPLC
QFDKSQCQRYGGFLCNDRGRCFMGQCACAEGWEGPACECPMSNQTCLDTKGGVCNGRGVC
KCGRCECQDSGLAMTPTCEANFQAQLGMCEDKRSCVQCQAWKTGEKKDSSQCDQCKFKVV
MVDELKENKEVIEACSFRDEDDDCTYHYTVDYPEDQADKELEVQVLKKKDCPPAGFLWLI
PLIMFLMLLLGLLLLCCWKYCACCKACLALLPCCGRGRMVGFKEDQYMLRQSLLTSDHLD
TPLVRTGPPKSTDVVRWKITDNVHRLPNHPLAKVQPNPKETIQFPLSLRLNRLFTESLSH
PDARDTEMLRREVDDNLNEVYKNVPGAQRVQKTKFRLQRNAGKRKDHTIVDTVVSAPRSS
YPDIVKLTEKNVQSGNFQDLKVVPGYYTVATDKEAAGAVEFQEGVEMVDVRVPLFIKEDD
DDKKQLQVEALDVPLGIAEIGKRFVNITIIKEHAKSIMTFLQPSYTYSRQDGVANIPISR
EIIEDGHTQVTYRTRDLTAKDKKDYVTVDGELSYGPGETQKTVPVRLLELGEGDGLLKDT
QVKQFVMDLTNPRQGAKLGRYPRTTVTITDQPEPSVVMFMKSTQSFSTADPTYSIPVVRT
RNQEGPATVHWKTRNAKRFELSGPLKFGPGETEKNIVIDPRPHPGPVKPEIFQLELFDPS
TNAAVGERKTTMVTVTDGEIAQKQQQGKEFINQTGMSPGGRLFSPTNVKAKATGPRNIRL
NWDPLGNPLGYKVKYWIYGDPETDEQVIDVKTTHAELTNLYPFCDYEMKVCGYNALGNGN
YSDMVPCRTLEDVPSEPGRLAFNVISPTVTQVSWAEPAETNGVITNYEVLYTPINDDTKP
MGVAKKVKIDNPKKRMLLIENLQSAQTYCYKVRAKNSVGWGPFREATINLASQPVRPMSI
PIIPDIPIVDAEAGDEYDGYLMYSSEVLRSPTGSKRPSVSDEDQMNGRWEQNFLFPGGNN
SMSRSANMSSSSYSQLSPMSTLSSNHRGGAGGSMTTDSSTTYLSGQGGNSLSRTQIIGGG
MRTENVVMRKRSENRGYYEYDDNIRDSIVIGDLSSGLSGYTDGKSTYGFSPTQTQYSYSM
SQVLRGRTQSEDVNDALLNLDRVLQDSRLAPGVPDTPTRLVFSALGPTALKVSWQEPHCD
RDVLGYCVLYQLLNGGDMKRIDVSSPADNSVVVQDLLPNHSYLFKVKAQSLEGWGPEREG
VITIESAVNPNSPLSPMPGSPFTLSTPSAPGPLVFTALSPEALQLSWEKPRKPNGDILGY
VVTCEQLHGGGDMRSFQVSGNSAETSLTVPDLCENMPYKFKVQARTTQGFGPEREGIITI
ESQDGGSTSQIGGIGGMSQLGGLGGMSQLGGLGGMSQLGGLGGMSQLGGLGGMSQIEGLG
GMSQYSSQSLTKRGVFQLPTEVSTHSNVTHTMINDPYFSGDGMMMTSQHTETSGMVTRHV
TKEVVQRSMQVAGSSSVTKKVERSFYEA
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatggggagatggacattaaatctcatggtgggggttgtacttcttgctgtc
ctcacagccagttgctacgctgaaaaagtgaatcactgtctggctacgagggctagcacc
tgttcagaatgtattcagtcagggaagggctgtgcctactgtccagatgagatctttgat
ggaccccgctgcgaccttcatgagaacatcataaaccacggctgtaaaagcgcggtgaca
gccaaaagcagtatgtcgatggagagaaacgagcagatcaacatgttgttgaagcagtcc
caggtagctcctcaggagatgtctatgactctgctgccaggggaggagagggagatagag
atggaggtgtttgaaccagctaaaggacctctggacctctacattcttatggacttctcc
aactccatggaggacgatctggacaacctcaagagaatgggtgctgagctggctgcgttg
gtaggtaagctgtctgatgattacaccatcggtttcggcaagtttgtggacaaagtggtg
gaaccccagacagacatgagaccatccaaacttgccaagccttggcccaacagcgaccct
cccttctcgttccgtcatgtgatcactctgacctctgacctgcggtccttcaccgagaaa
ctgcagaaggagaggatctcagggaacctggacgctccagaggggggctttgacgccatt
ctgcaggctgcagtctgcggggaaaagatcggctggcgtagccatgccacccacctcctg
gtcttctccaccgagtcggccttccactacgaggcggacggtgccaacgtgctggcgggc
atcatgccacgcaacgacgagcagtgccacctggaccccaatgggaaatacacagaggac
accaggcaggactacccctctgtgcccaccctggtccgcctgctgggcaaacacaacatt
atccccatcttcgccatcacaaaccactcctttacctattatcagaagctttatgagtat
ttccccatcgctgagttgggtctgctacaggaagactctgctaacatcctcaatatcctg
gagaaagcctttgagaatatccgttctaagatcagtatccgtgctgaggacaagcctaaa
gctatagaagctcaggtcctgtcatacagtggcagtgttgcgcaggctggaacattcaaa
gtcaagcctggacaaatagggaagtttaaggtgcgtgtcaaggccagtgagatggttggg
gagcaacatgtgtgtagtctggagcagggtgacaaaaaggggaagatgagagtcaaacca
acaaccttcagcacagctctaaacatcaacgccgaagtgctctgtaaaacctgcgactgt
gagaagactcccactgaaaatgcagcgcggtgtacaggccacggggacctggtctgtggg
aagtgccggtgctacgttggctggctgggtccgttctgtaactgctcaaccagtgcgtcg
ccggtcgcaggtagttcctgtctgggtcctgacgtgggggagccgtgttctggccgagga
gattgcctgtgtggaacgtgtgtgtgttacaacaccgaccagtacgagggacccctctgt
cagtttgacaagtcccagtgtcaacgatacggaggcttcctctgcaacgaccgtggtcgt
tgcttcatgggccagtgtgcgtgtgcagagggctgggagggaccggcctgtgagtgtccc
atgagcaaccagacctgtctggacactaaagggggtgtctgtaacgggcgtggcgtgtgt
aagtgcggtcgttgtgagtgccaggactctggcctggccatgacccccacctgtgaggct
aacttccaggcccagctggggatgtgtgaggacaagaggagctgtgttcagtgtcaggcc
tggaagacaggagagaaaaaggacagcagccagtgtgaccagtgcaagttcaaagtggtc
atggtggacgagctcaaggaaaataaagaggtgattgaggcgtgtagtttccgtgacgag
gatgacgactgtacgtaccactacaccgtggactacccagaggaccaggctgacaaggaa
ctggaggtccaggtgctcaaaaagaaagactgtccccctgctggcttcctgtggctgatc
cctctcatcatgttcctcatgttactgctgggtctactgctgctctgctgctggaagtac
tgcgcctgctgcaaggcatgtcttgctctactgccatgctgtggaagaggccgtatggtt
ggctttaaggaggaccagtacatgctccgccaatccctgctcacctctgaccacctggac
acgcccctagtgaggaccggcccgcctaagagcaccgacgtggttcgctggaagatcacc
gacaatgtgcaccgattgcccaatcacccgctggcgaaggtccagcccaaccccaaagag
accatccagttccctctgtccctgcgtctgaacaggttgttcacagaaagtctgtctcac
cccgacgccagagacacggagatgctacgcagggaggttgatgacaacctgaatgaagtg
tacaagaatgttcctggagcccagagggttcagaagaccaaatttagattacagagaaat
gctggtaaaagaaaagaccacacaattgtcgacacagtcgtgtccgctcctcgctccagc
taccccgacatcgtcaaattgactgagaaaaacgtccagtctggaaacttccaagacctc
aaagtggtgccgggctactacacagtggccacagacaaagaggcggctggcgccgtggag
ttccaggagggggtggagatggtggatgtgcgcgtgccgctcttcatcaaggaagatgat
gatgataagaagcagctgcaggtggaggcattggacgttcctctgggcatcgctgagata
gggaaacgcttcgtcaacatcaccatcatcaaagaacacgccaagagtattatgacattc
ctccagccttcctacacctacagccgacaggacggagtggctaacatccccattagcaga
gagatcatagaggacggacacacacaagtcacctaccgcacccgagacctcaccgccaag
gacaagaaggactatgtgacagtggatggggaactgtcctacgggccaggggagacccag
aagactgtccctgtgcgtctattggagctgggagagggagacggtctgctgaaggacaca
caggtcaaacaatttgtcatggacctcactaacccaagacagggagccaagctgggacgc
taccccagaaccaccgtcaccatcactgaccaaccagagcccagtgtggtgatgtttatg
aagagcacccagagcttctccacagctgacccaacctactccatccccgtggtccgcacg
cgcaaccaggaggggcctgccaccgtccactggaagacccgcaatgccaagcgcttcgag
ctgtccggtcccctcaagtttggtcccggggagactgagaagaacatcgtgatcgaccca
cgccctcaccctggaccggtcaaaccggaaatcttccagctggagttgtttgaccccagt
acgaacgctgcggtcggggagaggaagacgacaatggtcacggttactgacggagagatt
gcccagaagcagcagcagggtaaggagttcatcaaccagacaggcatgtctcctggtggt
cgtctcttctctcccaccaacgtgaaggctaaagccactggcccacgaaacatccgtctc
aactgggaccccttaggaaaccccctgggctacaaggtgaagtattggatctatggggac
cctgagactgatgagcaggtgatagatgtgaagaccacccacgctgagctgaccaacctg
taccccttctgtgactacgagatgaaggtgtgtggctacaacgccctgggaaacggaaac
tacagcgacatggtgccctgtcggaccctggaggacgtccccagtgagcctggtcgtctt
gcgttcaacgtcatcagtccaactgtcactcaggtcagctgggcggagcctgccgagacc
aacggtgtcatcaccaactacgaggtcctctacacacccatcaatgacgacacaaagccg
atgggtgtagctaagaaggttaagatagacaaccctaagaagaggatgttgctaattgag
aacctgcagtcggcccagacctactgttataaggtccgggctaagaacagcgttggctgg
ggtccattccgagaggcaaccatcaacctggcctcacagcccgtcagacccatgtccatc
cctatcatcccagacatcccaatagtggacgcggaggcgggggatgagtacgacggctac
ctgatgtacagcagtgaggtcttgaggtcgccaacaggctccaagagacccagcgtctca
gacgaagaccaaatgaacgggaggtgggaacaaaacttcctgttccccgggggaaataat
tccatgtcgcgcagtgccaatatgtcttcttccagctacagccagctgtctcccatgtcc
accctcagctccaaccacagaggaggggccgggggttccatgactacggattcctccaca
acatacctctctggacaaggaggaaactcgctctcccgcacacagattatcgggggcggg
atgcgcacagagaatgttgtcatgagaaagcggtcagagaacagaggttactatgagtat
gacgacaacatccgagactccatcgtcataggagacctgtccagtggattgtcgggatac
acagacggcaaaagtacgtatggcttcagccccactcagacacagtacagctacagtatg
tctcaggtcttgcggggcaggacccagtctgaggatgtcaacgatgcgctactgaatctg
gacagggtgctccaggactctcgtttggcccctggggtccctgacacccccaccaggttg
gtgttctctgccctgggccccacggccctgaaggtcagctggcaggagccccactgtgac
agggatgtgctggggtactgtgtcctctaccagctactcaatggaggtgatatgaagcgt
atagacgtgtccagcccagcagataactctgtggtggtgcaggacctgctgcctaaccac
tcctacctgttcaaggtgaaggctcagagtctggagggctggggaccagagagggaggga
gtcatcaccatagagtcagccgtcaaccccaacagcccactcagtccaatgccaggttct
cccttcactctcagtacccccagtgctccaggccccctggtgttcacagctctgtcccct
gaggcactgcagctgagctgggagaaaccccgcaaacccaacggagacatcctgggctac
gtggtcacctgtgaacagctgcacggaggaggtgacatgcgttccttccaggtgagcggt
aacagcgctgagaccagtctgacggttccggacctgtgtgagaacatgccgtacaagttc
aaagttcaggccaggacgacccagggcttcgggcccgagagggagggcatcatcaccatc
gagtctcaggatgggggtagcacgtctcaaataggtggaataggaggtatgtctcaacta
ggaggcctaggtggtatgtctcaactaggaggcctaggtggtatgtctcaactaggaggc
ctaggtggtatgtctcaactaggaggcctaggtggtatgtcccaaatagaaggcctagga
ggtatgtctcagtacagcagtcagtccttgaccaagagaggtgtgttccaactgccgaca
gaggtcagcacccacagcaacgtcacacacaccatgatcaacgacccctacttctcagga
gacggtatgatgatgacgtcccagcacacagagaccagcggcatggtaacacgtcatgtg
actaaggaggtggtccagaggagcatgcaggtggccggctccagcagcgtcaccaagaag
gtcgagaggtcgttctatgaggcctga
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integrated database retrieval system
