Salmo trutta (river trout): 115201388
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Entry
115201388 CDS
T08542
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
stru
Salmo trutta (river trout)
Pathway
stru03430
Mismatch repair
stru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115201388 (pms2)
03460 Fanconi anemia pathway
115201388 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115201388 (pms2)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
115201388 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
115201388
NCBI-ProteinID:
XP_029620829
Ensembl:
ENSSTUG00000002049
UniProt:
A0A673W7J0
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All DBs
Position
10:complement(22795249..22802725)
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AA seq
911 aa
AA seq
DB search
MKWCYQRKQNQQTEYSPYTDRQSFLQTVEMTDASSEPAGTIKAIDRHSVHQICSGQVVLT
LATAVKELVENSIDAGATNVDIKLKDSGTELVEVSDNGKGVEEANFEGLTLKHHTSKLKD
FSDLIHVETFGFRGEALSSLCALSDLSVVTCHEAAQVGTKLVFDHNGHLTQRLPHPRQQG
TTVSLSQLFYTLPVRHKEFQRNIKKEYTKMIHVLQSYCIVSTGVRITCTNQTGQGKRTPV
LCTSGRQSMRDNIGAIFGPKQLQSLLLFQQLSPTDNIKEDYGLSNADLPKDLFTISGFVS
RGDHGVGRSATDRQFFYINNRPCDPSKVSKVVNEVYHTFNRHQYPFVALNITVASECVDV
NVTPDKRQIFLQEEKLLLAILKSSLIAMYETGVNKISLNHMSFSTTSKHTLQGSYRPAEP
PSDMEGCQVPSSETAPEAGDDSESVIPSPQSSLNLAGLKAAFSMHNSPGSGSKSSTTKAA
NTGPTQKKLQSFFGGSDKSQNTHGPSLQSPLKSSRGAVKCSPVGRSVLVGFRYGRTPDSD
VDSGRESVLSEHSSPTATPESLYATTGSEFNSPDITVDDEPIIKSEALDEPFNEERTVAK
HFDRPIEPRISETSEEMSFSPNAKKAKLEDGQFSSEYKTTHSAGSEGSSGSNVDAPVCVQ
KRAVPLQFSVQELFGRVRRLQEQRREKAEDGLRYRRFRAKISPGENQSAEDELKKEICKD
SFKDMEIIGQFNLGFIITKLNSDIFMIDQHATDEKYNFEMLQQHTALQGQRLIVPQNLHL
TAVSENVLLENLEIFRKNGFDFLIDEEAQVMERVKLVSLPTSKNWTFGPGDIEELIFMLS
DSPGVMCRPSRVRQMFASRACRKSVMIGTALSTSEMKKLVVHMGEIEQPWNCPHGRPTMR
HLANLNIISED
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtgctaccagagaaaacagaatcaacaaacagaatatagtccttatacagac
cgacagagttttcttcaaacagtcgagatgacggatgcaagctctgaaccagctggaacc
atcaaggccattgacaggcactctgtgcatcagatctgctctggacaagttgtgttgacc
ctggctacagctgtcaaggaactggttgaaaacagtattgatgcaggggccaccaatgtt
gacattaaattgaaggacagtggaacagagcttgtggaagtgtctgacaacggcaaagga
gtggaagaggctaattttgaaggactaaccttgaagcaccacacatcgaagctgaaggat
ttctctgaccttatccacgtggaaacatttggcttccgaggggaagccctcagctctctt
tgtgccctcagtgacctcagtgttgtgacctgtcatgaggctgcccaggtgggcaccaag
ctggtgtttgaccacaacggtcacctgacccaacggttgccccaccccaggcagcagggc
accacggtcagcctttcgcagctcttctacaccctgcccgtccgacacaaggagttccaa
cgcaacatcaaaaaggaatacaccaagatgattcacgtgctccagtcctactgcatcgtc
tctacaggggttcgtatcacctgcaccaaccagacgggacagggcaaacgcaccccggtc
ctctgcaccagcggcagacagagcatgagggacaacattggagccatatttggccccaaa
cagttgcagagtctgcttctattccagcagctctccccaacagacaacatcaaggaggat
tatggactgagtaatgcagacctacccaaagacctcttcacaatctccggttttgtgtcg
cgaggggatcatggtgtcgggagaagtgccacagacagacagttcttttacatcaacaac
cggccgtgtgatccttctaaggtctccaaggttgtgaatgaagtgtatcacacgtttaac
agacatcagtatccatttgttgcattgaacatcactgttgcctcagagtgtgtggatgtg
aatgtcactccagacaagcgtcagatcttcctccaggaggagaagctcctgctagccatc
ctgaagagctctctcatcgccatgtacgagactggagtcaacaagattagcctcaaccac
atgtccttctccaccaccagtaaacacactttacaaggttcctacagaccagcagagcct
ccatctgatatggaaggatgccaggttccatcatctgagacggctcctgaagctggagat
gattcagaatctgttataccaagcccccagtcttctctcaacttggctggattgaaggct
gctttttccatgcacaacagcccaggcagtgggtccaagtcgagcactactaaagctgct
aacactggtccaacccagaagaaactgcagtctttcttcggaggctctgacaagagtcag
aacacacacgggccaagtttacaatctcctttgaaatccagtcgaggtgcagtgaaatgt
tccccagtggggaggtctgtgctggtggggttcaggtatggaaggacgccggacagcgac
gtagactctggcagagagagcgtcctgtcagagcacagctccccaacagccaccccagag
agtctctatgccactacagggtcagagttcaactcaccagacatcacagtagatgacgaa
cccattattaaaagcgaggcactcgatgaacccttcaatgaggaacgcacagttgctaag
cacttcgaccggccgattgaaccacgtatttcagagacgtctgaggagatgagcttcagt
cccaacgccaagaaggccaaactagaggatggtcagttctcctcagagtacaagaccaca
cattcagccggttcggaaggatcctctgggtctaatgtggacgcaccagtctgtgtacag
aagagggcagtgccactgcagttctctgtacaggagctgtttgggagggtgagaaggcta
caggaacagcgtagagagaaggctgaagacgggctgcgctacagacgcttcagagccaaa
atcagccctggagagaatcagagtgctgaggatgagctgaagaaagagatatgcaaagac
agttttaaggacatggagataatcggccagtttaacctgggcttcatcataactaagctc
aactctgacatcttcatgatagaccagcacgccacagacgagaagtacaacttcgagatg
cttcaacaacacaccgcactgcaaggacagcgactcattgttccacagaatctccacctc
acagcagtcagcgagaacgttctcttggagaaccttgagatcttcagaaagaatggcttt
gatttcctcatagatgaggaggcccaggtgatggagcgggtgaagctggtatccctgcca
accagtaagaactggacatttggtccgggggacatcgaggagctcatcttcatgttgagt
gacagcccaggggtcatgtgtcggccatctcgtgtcaggcagatgttcgcctccagggcc
tgcaggaagtcggtgatgatcggtactgctctgagcaccagtgagatgaagaagcttgtg
gttcatatgggggagatagagcagccttggaactgtccacatggcagacccactatgaga
caccttgcaaacttgaacatcatctcagaagactga
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