Salmo trutta (river trout): 115201542
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Entry
115201542 CDS
T08542
Name
(RefSeq) integrin alpha-9-like
KO
K06585
integrin alpha 9
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04514
Cell adhesion molecules
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115201542
04514 Cell adhesion molecules
115201542
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115201542
09142 Cell motility
04820 Cytoskeleton in muscle cells
115201542
04810 Regulation of actin cytoskeleton
115201542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115201542
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115201542
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
115201542
NCBI-ProteinID:
XP_029621113
Ensembl:
ENSSTUG00000009715
UniProt:
A0A673XNL5
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All DBs
Position
10:complement(29183748..29320661)
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AA seq
1030 aa
AA seq
DB search
MRRRMAHFPNQKRSLLNVLCVYLSVSVVHSYNIDLEHPIVFRGPDSSFFGYSVLEHYHDN
TRWVLVGAPKANSSHSSSVHTPGAVFKCRVHSNPERRCSEMDLGRGNKPRESCGKTCQGD
RDDEWMGVSLARQDKSNGKILACAHRWKNVYYDSELILPHGYCSIIPPTLQGRTQALIPC
YEDYKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTVKVYNLTSSTFYNPNKEEV
DSHRYSYLGYAVTAGHFSSPNFIDVAAGAPQHSGGGKVYIFRIDGGSLVKIFQASGKMMG
SYFGSSLCAVDLNRDGLSDLLVGAPMHSTLRDEGQVSVYLSKGNGVMEQAELLNGDDAYN
AHFGECITAIGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDATGIVNKYSMRLSGRSVNP
ALQMFGQSISGNVDMDGNGYLDITIGAFMADSVVLLRSRPVITVDVSIYLPVSINISVPQ
CHEGPQHLNCFNATVCLIFRGKHLPGQIELLYNLTADVDKRQRSQPSRVYLVQNGAQMSS
VSNELSLDINTVECQQYTAYVKKDVKDVFTAITFEVAYTLGKHVVDGHLDNDLPALTPVL
RWKKGDKIAAKNETWFEKNCLSDDCAADLRLHGKLLLSGLHVHPHLALGGVRNVSLNVTI
SNAGDDAYDTNIYFNFSREVFYINYWQREEKGISCGLVDLDFLKCSVGFPFMRAQTKYHL
AVIFDTSRLSGRNETLQFVVHAKSANPEHKLLDNTLELSIPLVHEVDTTITGVVNPTSFE
YGNSIDASRFVQLEDMECNFQPLNFTFQVINNGPSRLPGSIVDIRIPNRLAGNGADMFLI
MDSQVAEGRGNCTPHRNPQPCTIPQDRENIFHTIFAFFTKSGRRVLDCDRPGRACLTISC
ALGSQTKEDAISIDVKLLLNTEILNRDSSSLIQFVTRGNVRVDGRAMEVPEGLSEDTSLV
FEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRKDSD
ESWDWVEKNH
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaaggatggcccattttccgaatcagaagaggagccttttgaatgtgctctgc
gtctatttgtctgtttctgtagttcactcctacaacattgacttagaacatcctattgtg
ttccgtggacctgactcgagtttctttggatattctgttctggagcactatcatgacaat
acgcgctgggtgctggtaggggcccccaaggccaactcttcccacagcagctctgttcac
acccctggagccgtgttcaagtgccgtgtccacagcaacccagagagacgctgctctgag
atggacctaggcagagggaacaagcccagggagtcttgtgggaagacgtgccagggagac
agggatgatgagtggatgggggtcagcctcgcccggcaggacaaatccaatggaaaaata
ctggcctgtgcccaccgttggaagaacgtctactatgactctgagctcatccttccccat
ggttactgttccatcatccctcctacgctacagggccgaacccaagccctcatcccctgc
tatgaagactataagcagaagtatggggaagagcacggctcgtgccaagcggggatagcg
ggcgtttttactgaggagctggtggtgatgggagctccaggatcatactactggacagga
acagtcaaggtctacaacctgacctccagcaccttctacaaccccaacaaagaagaagtc
gactcacacagatacagctatctaggctatgctgtgactgctggacatttctcctctcct
aacttcatagatgtggctgcaggagctccacaacacagtggaggaggaaaagtttacatt
ttcagaatagatggtgggtctttggtgaagatctttcaagcctcagggaaaatgatgggc
tcttactttggctcctcattgtgtgcagttgacctgaaccgggacggcctgtcggacctg
ctggttggagcgcccatgcacagcacgctacgggacgagggacaggtctctgtctacctc
agcaagggcaatggggtgatggagcaggctgaactcttaaatggagatgatgcctacaat
gcacacttcggagagtgcatcactgcaatcggagacatcgatgacgatgggtaccaagat
gtggccataggagcacccaaagaggatgactacggtggagcagtctacatttaccatggc
gatgccacaggaatcgtcaacaaatattctatgaggctgtctggacggagtgtaaacccc
gccctccagatgttcggccaatcaatatctggcaatgtggacatggacggcaatggatat
ctagacattaccattggtgcttttatggctgatagtgtggtgttattgaggtcccgaccg
gtgatcactgtggacgtgtccatctacctgcctgtctccatcaacatctctgttcctcag
tgtcacgagggaccacagcaccttaactgtttcaacgctacagtctgcctgatcttcaga
ggaaaacacctgccgggacagatagagttgctgtataacctgacagctgatgtggataag
agacagaggagccagccttctagagtgtacttggttcagaacggagcccagatgagctct
gtgagcaacgagctcagtctggacatcaacacagtggagtgccaacagtacactgcatac
gttaagaaggacgtgaaagacgtgttcacagccatcacctttgaagtggcctacaccctg
gggaagcatgtggtggatggacatcttgacaatgacctgcctgctctcacacctgtacta
cgctggaagaaaggagacaagatagcagcaaagaatgagacatggtttgagaagaactgc
ctgtctgatgactgtgctgctgacctgagactccatgggaaactgctgctttctgggctc
cacgtccatccccaccttgctctaggaggagtgaggaacgtctctctgaacgtgaccatc
tccaacgcaggggacgatgcctacgacaccaatatctacttcaacttctccagagaggtc
ttctatatcaactactggcagagggaagagaagggtatttcctgtggtcttgttgattta
gacttcctcaaatgcagcgtgggatttcccttcatgagagcacagactaagtatcatctt
gcagtgatcttcgacacaagccggctttcagggagaaatgaaacattgcagtttgtagtt
catgcaaaaagtgccaaccctgaacataaactgttggacaatacgttggaactatctatc
ccactggtccatgaggtggacacaactatcactggagtggtgaacccgacgtcctttgag
tatgggaactccatcgatgcctctcgcttcgtccagctggaggacatggagtgtaacttc
cagccactcaacttcacctttcaggtgatcaacaacggccccagcaggctccctggctcc
atagtggacatcaggatccccaaccggctggctggaaatggggctgacatgttcctcatc
atggactcacaggtggcggaggggcgagggaactgcaccccccacaggaacccccagccc
tgtaccatcccgcaggacagagagaatatcttccacaccatcttcgccttcttcaccaag
tctggccgcagggtcctggattgtgaccggccagggagagcatgtttaaccatctcatgt
gcgctgggctcccagaccaaagaggatgctatcagtatagatgtgaaacttctactaaac
acagagatactgaatcgggacagctcgtcgttgatccagttcgtgacgaggggtaacgtg
agagtggacgggagggccatggaggtaccagagggcctatcagaagacacttcactggtg
ttcgaggcgctccacagccaggagccaaggggctatgttgttggttggatcattgccatc
agcctactggtgggaatactcatcttcctactgctggctgtgctgctctggaagatgggt
ttcttccgccggcgctaccgggaaatcatcgaggccgagaaaaacaggaaggacagtgac
gagagctgggattgggtggaaaagaaccactga
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