Salmo trutta (river trout): 115201546 Help Entry 115201546         CDS       T08542                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism stru  Salmo trutta (river trout) Pathway stru03430   Mismatch repair Brite KEGG Orthology (KO) [BR:stru00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     115201546 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:stru03400]     115201546 (msh6) DNA repair and recombination proteins [BR:stru03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      115201546 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  115201546 NCBI-ProteinID:  XP_029621120 Ensembl:  ENSSTUG00000010207 UniProt:  A0A673XT55 LinkDB All DBs Position 10:29641242..29675458 Genome browser AA seq 1389 aa AA seqDB search MAKQSSIFNFFNKSPPPVPKAKPSPSPAEADLPSSVRKKNSSPKEEAKHASQTPTTKKTP TKPLNAKASKGGFGKLFGNKTLTIKESPAPCPFSAGALVWAKLEGHPWWPCMVVPQPVSG QQMRGRGKSQRLHVHFFDEPPTRGWVSTKYIREYQGSDSSDAKTGGVFFSGKPVIRRAME LADAAMPDSPETRLKMPVCMDPSDAEEDEEEDMELDKSTLTDEDLTEEEDEETVKSKPSR RSSRATAEQGGKSKRRRIVVASDSEGSGDEFKPERAGCSSEEDEEDEEEVVNSASEEDVE SEREAEPDSPVKPVKRKRPAEKPSSAKPKPKTPTLPETAKRAPLSSTITANTKSRLSAFS APESFDSQANGSGAGGQGGATVWDHEKLDWLQEGRRKDAKRRRQSEEDYDPTTLYVPEDF LNKTTPGMRRWWQLKSETFDAVLFFKVGKFYELYHMDAVIGVNELGLTFMKGSWAHSGFP EIGFGRFSDGLVQRGYKVARVEQTETPDMMEARCKTMLKPTKFDRVVQREVCRIITRGTQ TYSVLDGAPSETHSKYLLSIKEKAEEESSGRCRTYGVSFVDTSVGYFHVGQFQDDRHCSR LRTLLSHYVPAQVLFEKGNPSAETRKIFKASLSSAMQEGLTAGSQFWDAQKTLKTLAEED YFKESVGKDEEPGSSVLPSVLKSMTSESDSLGLTPKEGYELALSALGGCMFYLKKCLVDQ ELLSMTNFQEYVPVDVEMEKAAGPTSFFSQTRQRMVLDGVTLANLEILQNVSGGTEGTLL ERLDTCSTPFGKRLLKQWLCSPLCNPTSIGERLDALEDLMGVQAQATEVSDLLKKLPDLE RLLSKIHSIGTPKGQDHPDSRAVLYEEVTYSKKKIADFLSALEGFKTMQEIVTILGPVVG DFQSRLLRQVVNLKDDGQEGLFPDLSAELKRWDTAFDHQKARATGVITPKAGFDPEFDQA LSGIKACERDLQDYLDRQKKRLGCRNLTYWGTGRNRFQMEVPDSVSERNIPEEYKVKSTK KGWKRYWTREIERLFSELQSLEEKRDAALKDCMRRLFYNFDKNYRDWQTGVECMAVLDVL LSLTRYSQGGDGGPMARPQVLLPGDISQSAAFLDLRGSRHPCVTKTFFGDDFIPNDIAIG CPGSEEEGQEDNGHAPCVLVTGPNMGGKSTLMRQCGLVVVLAQLGCYVPAESLSFTPVDR VFTRLGASDRIMAGESTFFVELSETASILHHGTKHSLVLLDELGRGTATYDGTAIASAVV NELAERICCRTLFSTHYHSLVEDYTNNPAVRLGHMACMVENEGDEDPSQETITFLYKFIT GACPKSYGFNAARLANLPEDVIQSGHRKAKEFERSTISLRVFKKLCLYAEDPTAASTQFA LLVRMISNL NT seq 4170 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagcagcattttcaattttttcaataagtctccgccaccggttccgaag gcgaaaccgagtccctcgcccgcagaagccgacttgccatcctcagttcgaaaaaagaac agctctccaaaagaagaagctaagcatgcatctcaaactcccaccaccaaaaagactcct acaaaaccccttaatgcaaaagcgagcaaaggtggattcggcaaactctttgggaataag acactaacaataaaggagagtccggcaccatgtccattcagtgccggagccttggtgtgg gccaagctagaggggcacccctggtggccgtgtatggtagtgccccagcctgtcagcggg cagcagatgaggggcaggggtaaaagccagcgcctgcatgtccacttcttcgacgagcca ccgaccaggggctgggtcagcaccaaatatatccgcgagtatcaaggctcggacagcagt gatgctaagacaggaggggtgttcttcagtggtaagcctgtgatccgcagggccatggag ctggctgatgctgctatgccagacagcccagagaccagactgaagatgcctgtctgtatg gacccatctgatgctgaggaagacgaggaggaggatatggagcttgataagtcaacattg accgacgaagatttgactgaagaggaagatgaggagacagtgaagtcaaagcctagtcgc cgttcctcccgtgccacagcagaacagggcggcaagtctaagcgtcgccgcatcgtggtc gcctccgacagtgaaggctcgggtgacgaattcaaaccagaacgggccggatgcagcagt gaggaagatgaggaagatgaggaagaggtagtgaacagtgcgtcggaggaagatgtagaa agtgaacgtgaggctgaacctgacagcccagttaaaccggtgaaacgcaaacgacccgcg gagaagccatccagtgccaaaccaaaacccaagactcccactcttccagaaaccgccaag agagctcccttatctagcaccatcacagccaacaccaagtctcgactctcagccttttcg gccccggagagcttcgacagccaggcgaatggctcaggtgccggcgggcaaggtggggct acggtatgggaccatgagaagcttgattggctacaggaaggccggaggaaagatgccaag agacggagacagtctgaggaagactacgaccccacgactctgtatgtcccagaagacttc ttgaacaaaacaaccccaggcatgcggcgctggtggcagctcaagtcggagacgtttgat gccgtgctcttcttcaaggtgggtaagttctatgagctgtaccacatggacgctgtgatt ggtgtcaacgagctgggtctgaccttcatgaaggggtcctgggcccactctggctttccc gagataggctttggacgcttctcagacggactggtgcagaggggatacaaggtggcacgt gtggagcagacggagactccagacatgatggaggctcgctgtaagaccatgctgaagccc accaagtttgaccgggtggtacagcgtgaggtgtgccgaatcatcacacggggaacacag acttacagcgtgttggacggagccccttctgagacacacagcaaatacctcctcagcatc aaggagaaggcagaggaggagagttcagggcgctgcaggacctatggggtcagcttcgtg gacacatctgtagggtacttccatgtgggccaattccaggacgaccgacactgctcccgg ctccgcaccctgttgtctcactacgttcctgcacaggtgctctttgagaaggggaaccct tcagccgaaacccgtaaaatcttcaaggcttctttgtcctcggctatgcaggaggggctg actgcaggctcccagttctgggatgcacagaagaccctgaagaccctagctgaagaagac tactttaaggagagtgtggggaaggatgaggagcctgggagcagtgttctcccctctgtc ctcaaatctatgacatctgagagcgactcgttgggtctgacccctaaggaggggtatgag ttggccctgtcggccctgggaggctgtatgttctaccttaagaaatgtctggtagaccag gagctgctgtccatgaccaacttccaggaatatgtcccagtggacgtggagatggagaag gcagccgggccaaccagtttcttctcccagacccgtcagcgtatggtcctggatggtgtg accctagccaacctggagatcctgcagaatgtctcggggggtacagaggggaccttgttg gaacgcctggatacctgtagtactccatttggtaaaaggttgctgaagcaatggctctgt tccccgctctgtaaccccacatccataggggaacgcctggatgccctggaggacctgatg ggagtgcaggcccaggctacggaggtctcagacctgctcaagaagctccctgatctggag aggctccttagtaagatccacagcattggtactccgaagggtcaggaccacccggacagc agggctgttttgtatgaagaggtcacctacagtaagaaaaagattgcggacttcctctcg gctctggagggcttcaagaccatgcaggagattgtgaccatactaggaccggtcgtgggc gacttccagtccaggctgctgcgccaggtggtcaacctgaaggatgacggtcaagagggc ctcttccctgacctgtcggccgagctgaaacgctgggacacagccttcgaccaccagaag gcccgcgccaccggagtcatcaccccgaaggctggctttgacccagagtttgaccaggct ctcagtggcatcaaggcctgtgagagggacctacaggactacctggacaggcagaagaag aggctgggctgcaggaacctgacctactgggggacgggacggaaccgctttcagatggaa gtaccagacagtgtctcagagaggaacattcctgaggagtacaaggtgaagtccactaag aagggttggaaacgctactggaccagggagatagagcgtctgttctcagagctccagagt cttgaggagaagagagacgcagctctgaaggactgcatgagaagactcttctacaacttt gacaagaactacagggactggcagactggggtggagtgcatggctgtgctagatgtgtta ctgagtctgacacggtacagccaggggggagatggaggaccaatggcacggcctcaagta ctacttcctggtgacatcagccaatcagcagccttcctggacctgaggggctcccgccac ccctgtgtcaccaaaaccttcttcggtgatgacttcatccctaatgacattgctattggc tgccctggcagcgaggaggagggccaggaggataacggacatgcaccctgcgtgctggtc actgggcctaacatgggaggaaagtcaactcttatgagacagtgtggtctggtggtggtc ttggcccagttgggttgctatgttcctgctgagagcctgtcctttacccctgtggacaga gtcttcacccgcttgggagcatcggaccgtatcatggctggggagagcaccttctttgta gagctcagtgagactgctagtatcctccaccatgggaccaagcactccctggtgctgctg gatgaactggggaggggcacagccacatatgacggcacagcgatagccagtgctgtggtg aacgagctggcggaaaggatctgctgtcggaccctcttctccacacattaccactcccta gtagaagactacaccaacaaccctgctgtacggctcggacacatggcctgtatggtggag aatgagggagatgaggaccctagtcaggagaccatcaccttcctctacaagtttatcacg ggagcatgtcctaaaagctacggtttcaatgctgctcgcctcgccaacctgcctgaggat gttatacaatcaggccacaggaaggccaaggagtttgagaggagcaccatttccctacga gtcttcaagaagctgtgtttgtatgctgaagaccccacagcagccagcacacagtttgcc ttgctggtccggatgatcagcaacctgtga

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